Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNA5SP330-201ENST00000517096 96 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 MIR548V-201ENST00000584165 80 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 AC093726.3-201ENST00000637588 150 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 RNU6-698P-201ENST00000363523 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNU6-668P-201ENST00000364180 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNU6-34P-201ENST00000364874 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 MTND4LP1-201ENST00000446263 157 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 snoR1.1-201ENST00000628177 80 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNA5SP215-201ENST00000363440 122 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 MIR517B-201ENST00000385102 67 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 RNU6-638P-201ENST00000516582 104 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORA62.4-201ENST00000365504 151 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 MIR630-201ENST00000384957 97 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 AC108676.2-201ENST00000605225 163 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORA41B-201ENST00000384785 128 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORD113-2-201ENST00000391082 72 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 MIR4436A-201ENST00000585278 85 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR548C-201ENST00000384815 97 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR124-2-201ENST00000385081 109 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-663P-201ENST00000391105 106 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 AC005520.4-201ENST00000604337 90 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR2909-201ENST00000617113 69 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-895P-201ENST00000384125 103 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 MIR4662A-201ENST00000637499 67 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 MIR518B-201ENST00000385127 83 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 U6.111-201ENST00000636093 83 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 RNU6-458P-201ENST00000384179 107 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNU6-630P-201ENST00000391258 106 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNA5SP480-201ENST00000516840 109 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 U6.58-201ENST00000613107 107 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORD116-16-201ENST00000384533 92 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORA13-201ENST00000458790 133 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 U7.5-201ENST00000517224 61 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORA25.4-201ENST00000363666 124 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 SNORD30.1-201ENST00000391309 70 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 RNU6-539P-201ENST00000516665 103 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 RNU6-598P-201ENST00000364017 105 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 RNU6-871P-201ENST00000516122 100 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 AP002795.1-201ENST00000534879 84 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU6-649P-201ENST00000384463 107 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 MIR329-2-201ENST00000385029 84 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 MIR204-201ENST00000385200 110 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORD19-201ENST00000391191 68 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORA3B-201ENST00000391305 131 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU7-88P-201ENST00000458752 63 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORD1B-201ENST00000363091 84 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 MIR527-201ENST00000385244 85 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 AC114801.3-201ENST00000510231 177 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 MIR4511-201ENST00000582784 87 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 SNORD60.1-201ENST00000362451 73 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNU6-924P-201ENST00000362926 108 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNA5SP457-201ENST00000363657 124 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNU6-800P-201ENST00000384473 103 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms