Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR3170-201ENST00000582699 77 ntBASIC0.98□□□□□ -2.25
NEDD1Q8NHV4 RN7SL793P-201ENST00000583259 296 ntBASIC0.98□□□□□ -2.25
NEDD1Q8NHV4 MIR106A-201ENST00000384870 81 ntBASIC0.97□□□□□ -2.25
NEDD1Q8NHV4 MIR760-201ENST00000390220 80 ntBASIC0.97□□□□□ -2.25
NEDD1Q8NHV4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 MIR518A1-201ENST00000385068 85 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 SNORD63.1-201ENST00000516178 80 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 SNORD63.2-201ENST00000516303 64 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 AC138207.3-201ENST00000585289 166 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 MIR499B-201ENST00000636498 73 ntBASIC0.96□□□□□ -2.26
NEDD1Q8NHV4 RNU6-848P-201ENST00000515948 107 ntBASIC0.95□□□□□ -2.26
NEDD1Q8NHV4 RNU6-617P-201ENST00000516147 107 ntBASIC0.95□□□□□ -2.26
NEDD1Q8NHV4 RNU6-473P-201ENST00000516164 107 ntBASIC0.95□□□□□ -2.26
NEDD1Q8NHV4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.95□□□□□ -2.26
NEDD1Q8NHV4 RNU6-258P-201ENST00000390884 101 ntBASIC0.94□□□□□ -2.26
NEDD1Q8NHV4 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
NEDD1Q8NHV4 SNORD45.2-201ENST00000363552 72 ntBASIC0.93□□□□□ -2.26
NEDD1Q8NHV4 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
NEDD1Q8NHV4 RNA5SP128-201ENST00000365305 116 ntBASIC0.93□□□□□ -2.26
NEDD1Q8NHV4 RNU6-530P-201ENST00000391180 107 ntBASIC0.93□□□□□ -2.26
NEDD1Q8NHV4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
NEDD1Q8NHV4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
NEDD1Q8NHV4 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
NEDD1Q8NHV4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.91□□□□□ -2.26
NEDD1Q8NHV4 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
NEDD1Q8NHV4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.91□□□□□ -2.26
NEDD1Q8NHV4 uc_338.36-201ENST00000622331 158 ntBASIC0.91□□□□□ -2.26
NEDD1Q8NHV4 snoR1.1-201ENST00000628177 80 ntBASIC0.91□□□□□ -2.26
NEDD1Q8NHV4 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
NEDD1Q8NHV4 RNU7-55P-201ENST00000459426 62 ntBASIC0.89□□□□□ -2.27
NEDD1Q8NHV4 AL391099.1-201ENST00000624635 187 ntBASIC0.89□□□□□ -2.27
NEDD1Q8NHV4 MIR520D-201ENST00000385002 87 ntBASIC0.88□□□□□ -2.27
NEDD1Q8NHV4 SNORD71-201ENST00000411292 86 ntBASIC0.88□□□□□ -2.27
NEDD1Q8NHV4 Y_RNA.206-201ENST00000364136 102 ntBASIC0.87□□□□□ -2.27
NEDD1Q8NHV4 MIR193B-201ENST00000384907 83 ntBASIC0.87□□□□□ -2.27
NEDD1Q8NHV4 Y_RNA.613-201ENST00000410726 97 ntBASIC0.87□□□□□ -2.27
NEDD1Q8NHV4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NEDD1Q8NHV4 RNU6-1238P-201ENST00000517215 102 ntBASIC0.86□□□□□ -2.27
NEDD1Q8NHV4 MIR8068-201ENST00000618032 68 ntBASIC0.86□□□□□ -2.27
NEDD1Q8NHV4 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
NEDD1Q8NHV4 RNA5SP98-201ENST00000363158 137 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 SNORA62.4-201ENST00000365504 151 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 RNU6-1326P-201ENST00000391262 107 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 AC096531.1-201ENST00000419107 107 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 AC104408.1-201ENST00000605241 170 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
NEDD1Q8NHV4 RNU6-973P-201ENST00000364690 107 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 SNORD19-201ENST00000391191 68 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 RNU6-732P-201ENST00000516033 103 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 RNU7-129P-201ENST00000516128 62 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 MIR1273G-201ENST00000577677 100 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
NEDD1Q8NHV4 SNORD44.1-201ENST00000363202 61 ntBASIC0.83□□□□□ -2.28
NEDD1Q8NHV4 Y_RNA.321-201ENST00000365149 102 ntBASIC0.83□□□□□ -2.28
NEDD1Q8NHV4 Y_RNA.345-201ENST00000365384 92 ntBASIC0.83□□□□□ -2.28
NEDD1Q8NHV4 MIR5704-201ENST00000584029 77 ntBASIC0.83□□□□□ -2.28
NEDD1Q8NHV4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
NEDD1Q8NHV4 RNU6-1111P-201ENST00000391118 107 ntBASIC0.82□□□□□ -2.28
NEDD1Q8NHV4 MIR1468-201ENST00000410600 86 ntBASIC0.82□□□□□ -2.28
NEDD1Q8NHV4 RNU6-863P-201ENST00000515989 104 ntBASIC0.82□□□□□ -2.28
NEDD1Q8NHV4 MIR6507-201ENST00000613630 70 ntBASIC0.82□□□□□ -2.28
NEDD1Q8NHV4 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
NEDD1Q8NHV4 RNU6-1133P-201ENST00000410963 100 ntBASIC0.81□□□□□ -2.28
NEDD1Q8NHV4 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
NEDD1Q8NHV4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.8□□□□□ -2.28
NEDD1Q8NHV4 SNORA42.1-201ENST00000363515 137 ntBASIC0.8□□□□□ -2.28
NEDD1Q8NHV4 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
NEDD1Q8NHV4 RNU6-894P-201ENST00000517094 105 ntBASIC0.8□□□□□ -2.28
NEDD1Q8NHV4 RNU6-900P-201ENST00000384498 102 ntBASIC0.79□□□□□ -2.28
NEDD1Q8NHV4 AC108740.1-201ENST00000498629 225 ntBASIC0.78□□□□□ -2.28
NEDD1Q8NHV4 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
NEDD1Q8NHV4 RNU6-1047P-201ENST00000364418 107 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 RNU6-127P-201ENST00000390897 107 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 AP002795.1-201ENST00000534879 84 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 uc_338.17-201ENST00000619633 179 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 MIR6513-201ENST00000621188 64 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 MIR924-201ENST00000638017 53 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 MIR4426-201ENST00000640330 63 ntBASIC0.76□□□□□ -2.29
NEDD1Q8NHV4 MIR103A1-201ENST00000362165 78 ntBASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 SNORA27.2-201ENST00000363365 126 ntBASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 RNA5SP457-201ENST00000363657 124 ntBASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 AC010487.4-201ENST00000637027 61 ntBASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 MIR4317-201ENST00000637586 65 ntBASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NEDD1Q8NHV4 MIR124-2-201ENST00000385081 109 ntBASIC0.74□□□□□ -2.29
NEDD1Q8NHV4 MIR548H2-201ENST00000408874 88 ntBASIC0.74□□□□□ -2.29
NEDD1Q8NHV4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.73□□□□□ -2.29
NEDD1Q8NHV4 RNU6-455P-201ENST00000384681 107 ntBASIC0.73□□□□□ -2.29
NEDD1Q8NHV4 MIR548Q-201ENST00000408404 100 ntBASIC0.73□□□□□ -2.29
NEDD1Q8NHV4 AC114755.3-201ENST00000481111 251 ntBASIC0.73□□□□□ -2.29
NEDD1Q8NHV4 MIR6854-201ENST00000614935 69 ntBASIC0.73□□□□□ -2.29
NEDD1Q8NHV4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
NEDD1Q8NHV4 SNORD111B-201ENST00000408587 80 ntBASIC0.72□□□□□ -2.29
NEDD1Q8NHV4 SNORD56B-201ENST00000384713 71 ntBASIC0.71□□□□□ -2.3
NEDD1Q8NHV4 SNORA68.3-201ENST00000515906 83 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 639.1 ms