Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
USP38Q8NB14 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
USP38Q8NB14 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
USP38Q8NB14 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
USP38Q8NB14 MIR494-201ENST00000349529 81 ntBASIC-0.63□□□□□ -2.51
USP38Q8NB14 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.63□□□□□ -2.51
USP38Q8NB14 MIR4484-201ENST00000582855 83 ntBASIC-0.63□□□□□ -2.51
USP38Q8NB14 MIR3675-201ENST00000583661 73 ntBASIC-0.63□□□□□ -2.51
USP38Q8NB14 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
USP38Q8NB14 AC022137.1-201ENST00000483735 151 ntBASIC-0.64□□□□□ -2.51
USP38Q8NB14 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
USP38Q8NB14 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.65□□□□□ -2.51
USP38Q8NB14 AC021146.6-201ENST00000514659 117 ntBASIC-0.65□□□□□ -2.51
USP38Q8NB14 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.65□□□□□ -2.51
USP38Q8NB14 SNORA8.1-201ENST00000384250 140 ntBASIC-0.66□□□□□ -2.52
USP38Q8NB14 RNU7-171P-201ENST00000459581 62 ntBASIC-0.66□□□□□ -2.52
USP38Q8NB14 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 MIR519A2-201ENST00000384990 87 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 RNA5SP470-201ENST00000516463 106 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 MIR6888-201ENST00000621977 67 ntBASIC-0.67□□□□□ -2.52
USP38Q8NB14 RNU6-645P-201ENST00000364649 106 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 SNORD74.6-201ENST00000364796 70 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 SNORA62.4-201ENST00000365504 151 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 MIR450A2-201ENST00000385022 100 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 MIR517B-201ENST00000385102 67 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 AL445584.3-201ENST00000617173 78 ntBASIC-0.68□□□□□ -2.52
USP38Q8NB14 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.69□□□□□ -2.52
USP38Q8NB14 MIR124-2-201ENST00000385081 109 ntBASIC-0.69□□□□□ -2.52
USP38Q8NB14 SNORD45.1-201ENST00000363181 77 ntBASIC-0.7□□□□□ -2.52
USP38Q8NB14 RNU6-604P-201ENST00000390917 100 ntBASIC-0.7□□□□□ -2.52
USP38Q8NB14 MIR3681-201ENST00000580089 72 ntBASIC-0.7□□□□□ -2.52
USP38Q8NB14 RNU6-315P-201ENST00000362666 107 ntBASIC-0.71□□□□□ -2.52
USP38Q8NB14 RNU6-518P-201ENST00000516056 96 ntBASIC-0.71□□□□□ -2.52
USP38Q8NB14 RNU6-982P-201ENST00000516216 102 ntBASIC-0.71□□□□□ -2.52
USP38Q8NB14 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.71□□□□□ -2.52
USP38Q8NB14 MIR664A-201ENST00000626086 82 ntBASIC-0.71□□□□□ -2.52
USP38Q8NB14 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
USP38Q8NB14 U2.7-201ENST00000619197 100 ntBASIC-0.72□□□□□ -2.52
USP38Q8NB14 MIR1297-201ENST00000637311 77 ntBASIC-0.72□□□□□ -2.52
USP38Q8NB14 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 RNU6-431P-201ENST00000383874 107 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 RNU6-807P-201ENST00000516805 107 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 MIR378F-201ENST00000578143 78 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 MIR548AG1-201ENST00000579932 66 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 AC062037.1-201ENST00000605302 128 ntBASIC-0.73□□□□□ -2.53
USP38Q8NB14 MIR147A-201ENST00000385079 72 ntBASIC-0.74□□□□□ -2.53
USP38Q8NB14 SNORD18.2-201ENST00000459604 70 ntBASIC-0.74□□□□□ -2.53
USP38Q8NB14 RNA5SP170-201ENST00000517150 101 ntBASIC-0.74□□□□□ -2.53
USP38Q8NB14 RNU6-787P-201ENST00000384032 107 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 RNU6-242P-201ENST00000384359 107 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 RNU6-380P-201ENST00000410207 107 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 AL500527.2-201ENST00000454105 95 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 SCARNA18B-201ENST00000458806 135 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 RNU7-154P-201ENST00000516194 62 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 MIR4712-201ENST00000583750 82 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 MIR1245B-201ENST00000636115 69 ntBASIC-0.75□□□□□ -2.53
USP38Q8NB14 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 SNORD114-25-201ENST00000363742 72 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 SNORD115-22-201ENST00000364456 82 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 RNU6-10P-201ENST00000384036 107 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
USP38Q8NB14 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 AL021921.1-201ENST00000442774 93 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 MIR4666B-201ENST00000578142 81 ntBASIC-0.76□□□□□ -2.53
USP38Q8NB14 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.77□□□□□ -2.53
USP38Q8NB14 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.77□□□□□ -2.53
USP38Q8NB14 RNU6-820P-201ENST00000384273 107 ntBASIC-0.77□□□□□ -2.53
USP38Q8NB14 MIR548C-201ENST00000384815 97 ntBASIC-0.77□□□□□ -2.53
USP38Q8NB14 SNORD64-201ENST00000386683 67 ntBASIC-0.77□□□□□ -2.53
USP38Q8NB14 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
USP38Q8NB14 MIR196A1-201ENST00000388006 70 ntBASIC-0.79□□□□□ -2.54
USP38Q8NB14 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.79□□□□□ -2.54
USP38Q8NB14 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.79□□□□□ -2.54
USP38Q8NB14 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.79□□□□□ -2.54
USP38Q8NB14 MIR6738-201ENST00000619620 64 ntBASIC-0.79□□□□□ -2.54
USP38Q8NB14 MIR365A-201ENST00000362260 87 ntBASIC-0.8□□□□□ -2.54
USP38Q8NB14 MIR382-201ENST00000637119 76 ntBASIC-0.8□□□□□ -2.54
USP38Q8NB14 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.81□□□□□ -2.54
USP38Q8NB14 SNORD73B-201ENST00000364394 72 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 SNORD45A-201ENST00000384512 84 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 RNU6-246P-201ENST00000384702 107 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.82□□□□□ -2.54
USP38Q8NB14 SNORD113.1-201ENST00000363280 73 ntBASIC-0.83□□□□□ -2.54
USP38Q8NB14 RNU7-174P-201ENST00000516248 59 ntBASIC-0.83□□□□□ -2.54
USP38Q8NB14 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.84□□□□□ -2.54
USP38Q8NB14 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.84□□□□□ -2.54
USP38Q8NB14 RNU6-924P-201ENST00000362926 108 ntBASIC-0.85□□□□□ -2.55
USP38Q8NB14 SNORA26.4-201ENST00000391188 123 ntBASIC-0.85□□□□□ -2.55
USP38Q8NB14 MIR8053-201ENST00000613344 75 ntBASIC-0.85□□□□□ -2.55
USP38Q8NB14 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.86□□□□□ -2.55
USP38Q8NB14 SNORD63.1-201ENST00000516178 80 ntBASIC-0.86□□□□□ -2.55
USP38Q8NB14 RNU6-70P-201ENST00000516438 60 ntBASIC-0.86□□□□□ -2.55
USP38Q8NB14 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms