Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 MIR488-201ENST00000365739 83 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 RNY4P18-201ENST00000391107 89 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 AC132825.6-201ENST00000638861 357 ntBASIC-1.32□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 MIR548M-201ENST00000408260 86 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 MIR4484-201ENST00000582855 83 ntBASIC-1.33□□□□□ -2.62
PRPF39Q86UA1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR889-201ENST00000401280 79 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR548Q-201ENST00000408404 100 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR4306-201ENST00000583390 91 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 U6.58-201ENST00000613107 107 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR6874-201ENST00000635894 71 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 MIR2052-201ENST00000636055 55 ntBASIC-1.34□□□□□ -2.62
PRPF39Q86UA1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 AC074348.1-201ENST00000426503 132 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.35□□□□□ -2.63
PRPF39Q86UA1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIR527-201ENST00000385244 85 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIR4324-201ENST00000584846 72 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 AC091912.2-201ENST00000624798 167 ntBASIC-1.36□□□□□ -2.63
PRPF39Q86UA1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 AC090616.4-201ENST00000448026 115 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 U4.4-201ENST00000620626 117 ntBASIC-1.37□□□□□ -2.63
PRPF39Q86UA1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 MIR4490-201ENST00000582647 84 ntBASIC-1.38□□□□□ -2.63
PRPF39Q86UA1 SNORA63.4-201ENST00000362763 126 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-313P-201ENST00000516317 112 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 MIR548V-201ENST00000584165 80 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 MIR6738-201ENST00000619620 64 ntBASIC-1.39□□□□□ -2.63
PRPF39Q86UA1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 MIR664A-201ENST00000626086 82 ntBASIC-1.4□□□□□ -2.63
PRPF39Q86UA1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.42□□□□□ -2.64
PRPF39Q86UA1 U2.18-201ENST00000622185 84 ntBASIC-1.42□□□□□ -2.64
PRPF39Q86UA1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 MIR630-201ENST00000384957 97 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 MIR520D-201ENST00000385002 87 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 AC006160.2-201ENST00000637708 154 ntBASIC-1.43□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.44□□□□□ -2.64
PRPF39Q86UA1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-147P-201ENST00000383983 107 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.45□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 SNORD45A-201ENST00000384512 84 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.46□□□□□ -2.64
PRPF39Q86UA1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 MIR4320-201ENST00000636981 65 ntBASIC-1.47□□□□□ -2.64
PRPF39Q86UA1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 MIR6502-201ENST00000617296 76 ntBASIC-1.48□□□□□ -2.65
PRPF39Q86UA1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.49□□□□□ -2.65
PRPF39Q86UA1 RNU6-49P-201ENST00000384256 107 ntBASIC-1.5□□□□□ -2.65
PRPF39Q86UA1 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 SNORA41B-201ENST00000384785 128 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MIR3115-201ENST00000577915 68 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 AC138207.3-201ENST00000585289 166 ntBASIC-1.51□□□□□ -2.65
PRPF39Q86UA1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.52□□□□□ -2.65
PRPF39Q86UA1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.52□□□□□ -2.65
PRPF39Q86UA1 SNORD20-201ENST00000384550 80 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms