Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 RNY1P5-201ENST00000383890 115 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 MIR487B-201ENST00000385021 84 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 MIR23C-201ENST00000579846 100 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-346P-201ENST00000516288 111 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 MIR3675-201ENST00000583661 73 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 RNU6-109P-201ENST00000516364 107 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 RNU6-184P-201ENST00000516514 107 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-14-201ENST00000383894 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-17-201ENST00000383929 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-15-201ENST00000384445 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-19-201ENST00000384729 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 RNU6-698P-201ENST00000363523 107 ntBASIC-1.91□□□□□ -2.72
ZNF404Q494X3 RNU6-34P-201ENST00000364874 107 ntBASIC-1.91□□□□□ -2.72
ZNF404Q494X3 RNU6-228P-201ENST00000362700 106 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 MIR520D-201ENST00000385002 87 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-303P-201ENST00000517091 106 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-330P-201ENST00000363015 107 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-106P-201ENST00000384405 107 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-554P-201ENST00000410466 106 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 AC108019.1-201ENST00000512540 175 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-557P-201ENST00000516842 110 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-255P-201ENST00000516957 105 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 U4.2-201ENST00000618561 85 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 AC093729.1-201ENST00000513074 128 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 MIR4723-201ENST00000585070 81 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 U4.4-201ENST00000620626 117 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 RNU6-604P-201ENST00000390917 100 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 MIR4668-201ENST00000582284 70 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 AC074348.1-201ENST00000426503 132 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 SNORA19-201ENST00000384737 128 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 MIR548V-201ENST00000584165 80 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 SNORD45.1-201ENST00000363181 77 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 U2.18-201ENST00000622185 84 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 MIR664B-201ENST00000626756 61 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 RNU6-766P-201ENST00000362478 107 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 MIR4756-201ENST00000577874 78 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 RNU6-686P-201ENST00000364839 107 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 Y_RNA.375-201ENST00000365625 101 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 RNU6-1111P-201ENST00000391118 107 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 MIR3170-201ENST00000582699 77 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 MIR548AA1-201ENST00000384971 97 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 AC120024.2-201ENST00000576526 175 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 RNY4P27-201ENST00000363341 96 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNA5SP215-201ENST00000363440 122 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNU6-497P-201ENST00000365316 104 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 MTND4LP1-201ENST00000446263 157 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 MIR2052-201ENST00000636055 55 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 SNORD116-16-201ENST00000384533 92 ntBASIC-2.03□□□□□ -2.73
ZNF404Q494X3 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 SNORD116-22-201ENST00000384430 92 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 RNU6-219P-201ENST00000364728 107 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-841P-201ENST00000383872 107 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 MIR630-201ENST00000384957 97 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 SNORD113-2-201ENST00000391082 72 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-563P-201ENST00000364872 108 ntBASIC-2.06□□□□□ -2.74
ZNF404Q494X3 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.06□□□□□ -2.74
ZNF404Q494X3 MIR3123-201ENST00000583417 75 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms