Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 RNY1P5-201ENST00000383890 115 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 MIR487B-201ENST00000385021 84 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.85□□□□□ -2.71
ZNF404Q494X3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 MIR23C-201ENST00000579846 100 ntBASIC-1.86□□□□□ -2.71
ZNF404Q494X3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.87□□□□□ -2.71
ZNF404Q494X3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-346P-201ENST00000516288 111 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 MIR3675-201ENST00000583661 73 ntBASIC-1.88□□□□□ -2.71
ZNF404Q494X3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 RNU6-109P-201ENST00000516364 107 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 RNU6-184P-201ENST00000516514 107 ntBASIC-1.89□□□□□ -2.71
ZNF404Q494X3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-14-201ENST00000383894 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-17-201ENST00000383929 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-15-201ENST00000384445 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 SNORD116-19-201ENST00000384729 92 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.9□□□□□ -2.71
ZNF404Q494X3 RNU6-698P-201ENST00000363523 107 ntBASIC-1.91□□□□□ -2.72
ZNF404Q494X3 RNU6-34P-201ENST00000364874 107 ntBASIC-1.91□□□□□ -2.72
ZNF404Q494X3 RNU6-228P-201ENST00000362700 106 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 MIR520D-201ENST00000385002 87 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-303P-201ENST00000517091 106 ntBASIC-1.92□□□□□ -2.72
ZNF404Q494X3 RNU6-330P-201ENST00000363015 107 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-106P-201ENST00000384405 107 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-554P-201ENST00000410466 106 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 AC108019.1-201ENST00000512540 175 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-557P-201ENST00000516842 110 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 RNU6-255P-201ENST00000516957 105 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 U4.2-201ENST00000618561 85 ntBASIC-1.93□□□□□ -2.72
ZNF404Q494X3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 AC093729.1-201ENST00000513074 128 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 MIR4723-201ENST00000585070 81 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 U4.4-201ENST00000620626 117 ntBASIC-1.94□□□□□ -2.72
ZNF404Q494X3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 RNU6-604P-201ENST00000390917 100 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 MIR4668-201ENST00000582284 70 ntBASIC-1.95□□□□□ -2.72
ZNF404Q494X3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 AC074348.1-201ENST00000426503 132 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.96□□□□□ -2.72
ZNF404Q494X3 SNORA19-201ENST00000384737 128 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 MIR548V-201ENST00000584165 80 ntBASIC-1.97□□□□□ -2.72
ZNF404Q494X3 SNORD45.1-201ENST00000363181 77 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 U2.18-201ENST00000622185 84 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 MIR664B-201ENST00000626756 61 ntBASIC-1.98□□□□□ -2.73
ZNF404Q494X3 RNU6-766P-201ENST00000362478 107 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 MIR4756-201ENST00000577874 78 ntBASIC-1.99□□□□□ -2.73
ZNF404Q494X3 RNU6-686P-201ENST00000364839 107 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 Y_RNA.375-201ENST00000365625 101 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 RNU6-1111P-201ENST00000391118 107 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 MIR3170-201ENST00000582699 77 ntBASIC-2□□□□□ -2.73
ZNF404Q494X3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 MIR548AA1-201ENST00000384971 97 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 AC120024.2-201ENST00000576526 175 ntBASIC-2.01□□□□□ -2.73
ZNF404Q494X3 RNY4P27-201ENST00000363341 96 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNA5SP215-201ENST00000363440 122 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNU6-497P-201ENST00000365316 104 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 MTND4LP1-201ENST00000446263 157 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 MIR2052-201ENST00000636055 55 ntBASIC-2.02□□□□□ -2.73
ZNF404Q494X3 SNORD116-16-201ENST00000384533 92 ntBASIC-2.03□□□□□ -2.73
ZNF404Q494X3 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 SNORD116-22-201ENST00000384430 92 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.04□□□□□ -2.74
ZNF404Q494X3 RNU6-219P-201ENST00000364728 107 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-841P-201ENST00000383872 107 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 MIR630-201ENST00000384957 97 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 SNORD113-2-201ENST00000391082 72 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.05□□□□□ -2.74
ZNF404Q494X3 RNU6-563P-201ENST00000364872 108 ntBASIC-2.06□□□□□ -2.74
ZNF404Q494X3 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.06□□□□□ -2.74
ZNF404Q494X3 MIR3123-201ENST00000583417 75 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms