Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SNORD114-17-201ENST00000364699 75 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 SNORD115-31-201ENST00000365318 82 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 RNU6-820P-201ENST00000384273 107 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 SNORA26.4-201ENST00000391188 123 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 SCARNA17-201ENST00000516183 144 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 RNU6-687P-201ENST00000516443 89 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 RNU6-807P-201ENST00000516805 107 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 MIR3134-201ENST00000579433 74 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 MIR4484-201ENST00000582855 83 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 AL109933.3-201ENST00000619095 188 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 MIR1245B-201ENST00000636115 69 ntBASIC-0.31□□□□□ -2.46
CKAP4Q07065 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 SNORD113.1-201ENST00000363280 73 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 SNORD114-25-201ENST00000363742 72 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 SNORD45A-201ENST00000384512 84 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 SNORA41B-201ENST00000384785 128 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 MIR520D-201ENST00000385002 87 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 MIR29B1-201ENST00000385015 81 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 RNU6-380P-201ENST00000410207 107 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 AL021921.1-201ENST00000442774 93 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 RNA5SP285-201ENST00000516619 119 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 U7.5-201ENST00000517224 61 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 MIR548V-201ENST00000584165 80 ntBASIC-0.32□□□□□ -2.46
CKAP4Q07065 SNORD45.1-201ENST00000363181 77 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-698P-201ENST00000363523 107 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-598P-201ENST00000364017 105 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-34P-201ENST00000364874 107 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-242P-201ENST00000384359 107 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 MIR204-201ENST00000385200 110 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 AC021146.6-201ENST00000514659 117 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNU6-732P-201ENST00000516033 103 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 RNA5SP330-201ENST00000517096 96 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 snoR1.1-201ENST00000628177 80 ntBASIC-0.33□□□□□ -2.46
CKAP4Q07065 SNORD115-33-201ENST00000363723 82 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 MIR196A1-201ENST00000388006 70 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 SNORD113-2-201ENST00000391082 72 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 SNORD57-201ENST00000448188 72 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 SNORD18.2-201ENST00000459604 70 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 MIR4499-201ENST00000584834 69 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 MIR6818-201ENST00000621576 65 ntBASIC-0.34□□□□□ -2.46
CKAP4Q07065 RNU6-228P-201ENST00000362700 106 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 SNORD73B-201ENST00000364394 72 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNU6-608P-201ENST00000383927 104 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNU6-458P-201ENST00000384179 107 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNU6-258P-201ENST00000390884 101 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 U6.58-201ENST00000613107 107 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.35□□□□□ -2.47
CKAP4Q07065 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU6-924P-201ENST00000362926 108 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 SNORD116-16-201ENST00000384533 92 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU6-540P-201ENST00000384622 101 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 MIR630-201ENST00000384957 97 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU7-88P-201ENST00000458752 63 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 U2.18-201ENST00000622185 84 ntBASIC-0.36□□□□□ -2.47
CKAP4Q07065 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.37□□□□□ -2.47
CKAP4Q07065 SNORD1B-201ENST00000363091 84 ntBASIC-0.37□□□□□ -2.47
CKAP4Q07065 RNA5SP215-201ENST00000363440 122 ntBASIC-0.37□□□□□ -2.47
CKAP4Q07065 RNU6-573P-201ENST00000383938 106 ntBASIC-0.37□□□□□ -2.47
CKAP4Q07065 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
CKAP4Q07065 RNY4P29-201ENST00000410801 97 ntBASIC-0.37□□□□□ -2.47
CKAP4Q07065 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.37□□□□□ -2.47
CKAP4Q07065 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.37□□□□□ -2.47
CKAP4Q07065 MIR224-201ENST00000384889 81 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 RNU6-696P-201ENST00000390834 107 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 RNU6-279P-201ENST00000391297 101 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 RNU4-63P-201ENST00000411313 118 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 AC090616.4-201ENST00000448026 115 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 MIR8053-201ENST00000613344 75 ntBASIC-0.38□□□□□ -2.47
CKAP4Q07065 RNA5SP173-201ENST00000364857 136 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 MIR125B1-201ENST00000385236 88 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 MIR6502-201ENST00000617296 76 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 MIR7978-201ENST00000636158 59 ntBASIC-0.39□□□□□ -2.47
CKAP4Q07065 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNA5SP257-201ENST00000363023 116 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNU6-974P-201ENST00000384099 108 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms