Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FTX_4.1-201ENST00000616291 147 ntBASIC-3.94□□□□□ -3.04
TPM4P67936 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.95□□□□□ -3.04
TPM4P67936 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.95□□□□□ -3.04
TPM4P67936 AC044792.1-201ENST00000593294 196 ntBASIC-3.95□□□□□ -3.04
TPM4P67936 MIR496-201ENST00000385226 102 ntBASIC-3.96□□□□□ -3.04
TPM4P67936 SNORA27.2-201ENST00000363365 126 ntBASIC-3.97□□□□□ -3.04
TPM4P67936 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.97□□□□□ -3.04
TPM4P67936 MIR548V-201ENST00000584165 80 ntBASIC-3.97□□□□□ -3.04
TPM4P67936 RNU6-904P-201ENST00000516206 101 ntBASIC-3.98□□□□□ -3.05
TPM4P67936 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.99□□□□□ -3.05
TPM4P67936 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.99□□□□□ -3.05
TPM4P67936 RNU6-394P-201ENST00000410735 107 ntBASIC-3.99□□□□□ -3.05
TPM4P67936 RNY3P8-201ENST00000411366 126 ntBASIC-3.99□□□□□ -3.05
TPM4P67936 RNU6-982P-201ENST00000516216 102 ntBASIC-3.99□□□□□ -3.05
TPM4P67936 Y_RNA.501-201ENST00000384467 103 ntBASIC-4□□□□□ -3.05
TPM4P67936 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4□□□□□ -3.05
TPM4P67936 Y_RNA.475-201ENST00000384345 101 ntBASIC-4.01□□□□□ -3.05
TPM4P67936 SNORD116-16-201ENST00000384533 92 ntBASIC-4.01□□□□□ -3.05
TPM4P67936 RNU6-1064P-201ENST00000410626 104 ntBASIC-4.01□□□□□ -3.05
TPM4P67936 AC097484.2-201ENST00000509147 251 ntBASIC-4.01□□□□□ -3.05
TPM4P67936 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.01□□□□□ -3.05
TPM4P67936 SNORD1B-201ENST00000363091 84 ntBASIC-4.02□□□□□ -3.05
TPM4P67936 SNORD113-2-201ENST00000391082 72 ntBASIC-4.02□□□□□ -3.05
TPM4P67936 RNU6-669P-201ENST00000365575 107 ntBASIC-4.03□□□□□ -3.05
TPM4P67936 RNU6-574P-201ENST00000384265 107 ntBASIC-4.03□□□□□ -3.05
TPM4P67936 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.03□□□□□ -3.05
TPM4P67936 SNORD63.2-201ENST00000516303 64 ntBASIC-4.04□□□□□ -3.06
TPM4P67936 RNU6-330P-201ENST00000363015 107 ntBASIC-4.05□□□□□ -3.06
TPM4P67936 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.05□□□□□ -3.06
TPM4P67936 MIR1302-3-201ENST00000408128 138 ntBASIC-4.05□□□□□ -3.06
TPM4P67936 MIR581-201ENST00000384895 96 ntBASIC-4.06□□□□□ -3.06
TPM4P67936 MIR519C-201ENST00000385053 87 ntBASIC-4.06□□□□□ -3.06
TPM4P67936 RNU6-995P-201ENST00000391244 107 ntBASIC-4.06□□□□□ -3.06
TPM4P67936 RNU6-1094P-201ENST00000362416 104 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 SNORD18C-201ENST00000362704 69 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 MIR630-201ENST00000384957 97 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 MIR1207-201ENST00000408249 87 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 MTND4LP9-201ENST00000427694 174 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 MTCYBP9-201ENST00000431021 303 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 RNU7-61P-201ENST00000515897 61 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 RNU7-151P-201ENST00000516930 53 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 MIR3675-201ENST00000583661 73 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 AC008737.2-201ENST00000599446 118 ntBASIC-4.07□□□□□ -3.06
TPM4P67936 Y_RNA.61-201ENST00000362835 102 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 SNORA41B-201ENST00000384785 128 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 MIR3914-2-201ENST00000637339 95 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.08□□□□□ -3.06
TPM4P67936 RNU6-604P-201ENST00000390917 100 ntBASIC-4.09□□□□□ -3.06
TPM4P67936 Y_RNA.525-201ENST00000384570 113 ntBASIC-4.1□□□□□ -3.07
TPM4P67936 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-4.1□□□□□ -3.07
TPM4P67936 RNU7-107P-201ENST00000459121 61 ntBASIC-4.1□□□□□ -3.07
TPM4P67936 SNORD33.1-201ENST00000516213 88 ntBASIC-4.1□□□□□ -3.07
TPM4P67936 RNU6-426P-201ENST00000516464 97 ntBASIC-4.1□□□□□ -3.07
TPM4P67936 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.11□□□□□ -3.07
TPM4P67936 RNU6-523P-201ENST00000516304 54 ntBASIC-4.11□□□□□ -3.07
TPM4P67936 MIR4723-201ENST00000585070 81 ntBASIC-4.11□□□□□ -3.07
TPM4P67936 MIR7978-201ENST00000636158 59 ntBASIC-4.11□□□□□ -3.07
TPM4P67936 RNU6-804P-201ENST00000384286 107 ntBASIC-4.12□□□□□ -3.07
TPM4P67936 Y_RNA.398-201ENST00000383952 99 ntBASIC-4.13□□□□□ -3.07
TPM4P67936 RNU6-974P-201ENST00000384099 108 ntBASIC-4.13□□□□□ -3.07
TPM4P67936 MIR579-201ENST00000385221 98 ntBASIC-4.13□□□□□ -3.07
TPM4P67936 MIR4801-201ENST00000582704 82 ntBASIC-4.13□□□□□ -3.07
TPM4P67936 Y_RNA.8-201ENST00000362353 102 ntBASIC-4.14□□□□□ -3.07
TPM4P67936 Y_RNA.349-201ENST00000365406 102 ntBASIC-4.14□□□□□ -3.07
TPM4P67936 RNY4P9-201ENST00000363194 97 ntBASIC-4.15□□□□□ -3.07
TPM4P67936 MIR568-201ENST00000385036 95 ntBASIC-4.15□□□□□ -3.07
TPM4P67936 MIR125B1-201ENST00000385236 88 ntBASIC-4.16□□□□□ -3.08
TPM4P67936 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.17□□□□□ -3.08
TPM4P67936 SNORA8.1-201ENST00000384250 140 ntBASIC-4.17□□□□□ -3.08
TPM4P67936 U6.95-201ENST00000636931 70 ntBASIC-4.17□□□□□ -3.08
TPM4P67936 SNORD115-37-201ENST00000363768 82 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 MIR606-201ENST00000384851 96 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 RNU6-162P-201ENST00000516228 103 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 U7.3-201ENST00000616123 62 ntBASIC-4.18□□□□□ -3.08
TPM4P67936 RNU6-141P-201ENST00000410499 105 ntBASIC-4.19□□□□□ -3.08
TPM4P67936 RNU6-624P-201ENST00000363411 107 ntBASIC-4.2□□□□□ -3.08
TPM4P67936 SNORA40-201ENST00000388090 126 ntBASIC-4.2□□□□□ -3.08
TPM4P67936 Y_RNA.629-201ENST00000411368 105 ntBASIC-4.2□□□□□ -3.08
TPM4P67936 RNU6-303P-201ENST00000517091 106 ntBASIC-4.2□□□□□ -3.08
TPM4P67936 SNORD54-201ENST00000459159 67 ntBASIC-4.21□□□□□ -3.08
TPM4P67936 SNORD45.1-201ENST00000363181 77 ntBASIC-4.22□□□□□ -3.08
TPM4P67936 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.22□□□□□ -3.08
TPM4P67936 RNY1P1-201ENST00000364372 112 ntBASIC-4.22□□□□□ -3.08
TPM4P67936 RNU6-182P-201ENST00000516970 105 ntBASIC-4.22□□□□□ -3.08
TPM4P67936 RNA5SP215-201ENST00000363440 122 ntBASIC-4.23□□□□□ -3.09
TPM4P67936 RNU6-694P-201ENST00000364071 147 ntBASIC-4.23□□□□□ -3.09
TPM4P67936 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.23□□□□□ -3.09
TPM4P67936 Y_RNA.313-201ENST00000365095 103 ntBASIC-4.23□□□□□ -3.09
TPM4P67936 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.23□□□□□ -3.09
TPM4P67936 SNORD113-3-201ENST00000364830 72 ntBASIC-4.24□□□□□ -3.09
TPM4P67936 MTATP8P2-201ENST00000435212 202 ntBASIC-4.24□□□□□ -3.09
TPM4P67936 MTND4LP1-201ENST00000446263 157 ntBASIC-4.24□□□□□ -3.09
TPM4P67936 Y_RNA.684-201ENST00000516510 99 ntBASIC-4.24□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms