Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 RNU6-554P-201ENST00000410466 106 ntBASIC-2.05□□□□□ -2.74
EIF3EP60228 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.05□□□□□ -2.74
EIF3EP60228 RNU6-106P-201ENST00000384405 107 ntBASIC-2.06□□□□□ -2.74
EIF3EP60228 MIR520D-201ENST00000385002 87 ntBASIC-2.06□□□□□ -2.74
EIF3EP60228 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.06□□□□□ -2.74
EIF3EP60228 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.07□□□□□ -2.74
EIF3EP60228 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.07□□□□□ -2.74
EIF3EP60228 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.07□□□□□ -2.74
EIF3EP60228 RNU6-540P-201ENST00000384622 101 ntBASIC-2.07□□□□□ -2.74
EIF3EP60228 RNU7-174P-201ENST00000516248 59 ntBASIC-2.07□□□□□ -2.74
EIF3EP60228 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.08□□□□□ -2.74
EIF3EP60228 RNA5SP180-201ENST00000516181 101 ntBASIC-2.08□□□□□ -2.74
EIF3EP60228 MIR1246-201ENST00000636535 73 ntBASIC-2.08□□□□□ -2.74
EIF3EP60228 RNU6-695P-201ENST00000391157 104 ntBASIC-2.09□□□□□ -2.74
EIF3EP60228 MIR23C-201ENST00000579846 100 ntBASIC-2.09□□□□□ -2.74
EIF3EP60228 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 RNU6-633P-201ENST00000362612 103 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 RNU6-624P-201ENST00000363411 107 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.1□□□□□ -2.75
EIF3EP60228 SNORD115-37-201ENST00000363768 82 ntBASIC-2.11□□□□□ -2.75
EIF3EP60228 RNU6-587P-201ENST00000391282 106 ntBASIC-2.11□□□□□ -2.75
EIF3EP60228 RNU6-598P-201ENST00000364017 105 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 MIR548C-201ENST00000384815 97 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 MIR601-201ENST00000385256 79 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 AC108019.1-201ENST00000512540 175 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 RNU6-983P-201ENST00000516004 103 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 RNU6-158P-201ENST00000517104 100 ntBASIC-2.12□□□□□ -2.75
EIF3EP60228 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.13□□□□□ -2.75
EIF3EP60228 SNORA19-201ENST00000384737 128 ntBASIC-2.13□□□□□ -2.75
EIF3EP60228 RNU6-228P-201ENST00000362700 106 ntBASIC-2.15□□□□□ -2.75
EIF3EP60228 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.15□□□□□ -2.75
EIF3EP60228 MIR4668-201ENST00000582284 70 ntBASIC-2.15□□□□□ -2.75
EIF3EP60228 RNU6-766P-201ENST00000362478 107 ntBASIC-2.16□□□□□ -2.76
EIF3EP60228 MIR1285-2-201ENST00000408311 88 ntBASIC-2.16□□□□□ -2.76
EIF3EP60228 AC120024.2-201ENST00000576526 175 ntBASIC-2.16□□□□□ -2.76
EIF3EP60228 MIR3675-201ENST00000583661 73 ntBASIC-2.16□□□□□ -2.76
EIF3EP60228 MIR429-201ENST00000362106 83 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 RNU6-841P-201ENST00000383872 107 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 AC093729.1-201ENST00000513074 128 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 MIR3123-201ENST00000583417 75 ntBASIC-2.17□□□□□ -2.76
EIF3EP60228 RNU6-330P-201ENST00000363015 107 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 RNU6-563P-201ENST00000364872 108 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 RNU6-303P-201ENST00000517091 106 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 U4.4-201ENST00000620626 117 ntBASIC-2.18□□□□□ -2.76
EIF3EP60228 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.19□□□□□ -2.76
EIF3EP60228 RNU6-557P-201ENST00000516842 110 ntBASIC-2.19□□□□□ -2.76
EIF3EP60228 U2.18-201ENST00000622185 84 ntBASIC-2.19□□□□□ -2.76
EIF3EP60228 RNU6-698P-201ENST00000363523 107 ntBASIC-2.2□□□□□ -2.76
EIF3EP60228 RNU6-34P-201ENST00000364874 107 ntBASIC-2.2□□□□□ -2.76
EIF3EP60228 MIR3170-201ENST00000582699 77 ntBASIC-2.2□□□□□ -2.76
EIF3EP60228 AL627230.5-201ENST00000619807 58 ntBASIC-2.2□□□□□ -2.76
EIF3EP60228 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.21□□□□□ -2.76
EIF3EP60228 MIR4756-201ENST00000577874 78 ntBASIC-2.21□□□□□ -2.76
EIF3EP60228 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.21□□□□□ -2.76
EIF3EP60228 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 SNORA8.1-201ENST00000384250 140 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 AC074348.1-201ENST00000426503 132 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 MIR548AM-201ENST00000584298 74 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 MIR664B-201ENST00000626756 61 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 MIR2052-201ENST00000636055 55 ntBASIC-2.22□□□□□ -2.76
EIF3EP60228 RNU6-959P-201ENST00000384671 107 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 RNU6-604P-201ENST00000390917 100 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 MIR1468-201ENST00000410600 86 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 AC008267.6-201ENST00000441664 139 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 RNU6-982P-201ENST00000516216 102 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 RNU6-589P-201ENST00000516485 107 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.23□□□□□ -2.77
EIF3EP60228 RNU6-497P-201ENST00000365316 104 ntBASIC-2.24□□□□□ -2.77
EIF3EP60228 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.24□□□□□ -2.77
EIF3EP60228 RNU6-794P-201ENST00000517261 64 ntBASIC-2.24□□□□□ -2.77
EIF3EP60228 MIR548V-201ENST00000584165 80 ntBASIC-2.24□□□□□ -2.77
EIF3EP60228 AC090425.1-201ENST00000610007 140 ntBASIC-2.24□□□□□ -2.77
EIF3EP60228 RNU6-258P-201ENST00000390884 101 ntBASIC-2.25□□□□□ -2.77
EIF3EP60228 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.25□□□□□ -2.77
EIF3EP60228 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.25□□□□□ -2.77
EIF3EP60228 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.25□□□□□ -2.77
EIF3EP60228 RNU6-686P-201ENST00000364839 107 ntBASIC-2.26□□□□□ -2.77
EIF3EP60228 MIR3133-201ENST00000583157 78 ntBASIC-2.26□□□□□ -2.77
EIF3EP60228 RNU6-219P-201ENST00000364728 107 ntBASIC-2.27□□□□□ -2.77
EIF3EP60228 MIR548AA1-201ENST00000384971 97 ntBASIC-2.27□□□□□ -2.77
EIF3EP60228 MIR365A-201ENST00000362260 87 ntBASIC-2.28□□□□□ -2.77
EIF3EP60228 SNORD45.1-201ENST00000363181 77 ntBASIC-2.28□□□□□ -2.77
EIF3EP60228 SNORD116-22-201ENST00000384430 92 ntBASIC-2.28□□□□□ -2.77
EIF3EP60228 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.29□□□□□ -2.78
EIF3EP60228 SNORD116-16-201ENST00000384533 92 ntBASIC-2.29□□□□□ -2.78
EIF3EP60228 MIR4441-201ENST00000582623 100 ntBASIC-2.29□□□□□ -2.78
EIF3EP60228 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.3□□□□□ -2.78
EIF3EP60228 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.3□□□□□ -2.78
EIF3EP60228 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.3□□□□□ -2.78
EIF3EP60228 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.3□□□□□ -2.78
EIF3EP60228 RNU6-834P-201ENST00000362367 110 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms