Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 MIR508-201ENST00000384857 115 ntBASIC1.07□□□□□ -2.24
HDGFP51858 RNU6-1267P-201ENST00000410747 107 ntBASIC1.07□□□□□ -2.24
HDGFP51858 SCARNA11.2-201ENST00000517183 154 ntBASIC1.07□□□□□ -2.24
HDGFP51858 MIR6888-201ENST00000621977 67 ntBASIC1.07□□□□□ -2.24
HDGFP51858 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HDGFP51858 RNU7-129P-201ENST00000516128 62 ntBASIC1.06□□□□□ -2.24
HDGFP51858 MIR4464-201ENST00000580818 92 ntBASIC1.06□□□□□ -2.24
HDGFP51858 MIR924-201ENST00000638017 53 ntBASIC1.05□□□□□ -2.24
HDGFP51858 MIR548AA1-201ENST00000384971 97 ntBASIC1.04□□□□□ -2.24
HDGFP51858 MIR125B1-201ENST00000385236 88 ntBASIC1.04□□□□□ -2.24
HDGFP51858 uc_338.36-201ENST00000622331 158 ntBASIC1.04□□□□□ -2.24
HDGFP51858 MIR106A-201ENST00000384870 81 ntBASIC1.03□□□□□ -2.24
HDGFP51858 MIR329-2-201ENST00000385029 84 ntBASIC1.03□□□□□ -2.24
HDGFP51858 RNU6-696P-201ENST00000390834 107 ntBASIC1.03□□□□□ -2.24
HDGFP51858 RNA5SP347-201ENST00000362445 119 ntBASIC1.02□□□□□ -2.25
HDGFP51858 SNORD44.1-201ENST00000363202 61 ntBASIC1.02□□□□□ -2.25
HDGFP51858 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
HDGFP51858 RNU6-110P-201ENST00000384508 104 ntBASIC1.01□□□□□ -2.25
HDGFP51858 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
HDGFP51858 snoR1.1-201ENST00000628177 80 ntBASIC1.01□□□□□ -2.25
HDGFP51858 RNU6-995P-201ENST00000391244 107 ntBASIC1□□□□□ -2.25
HDGFP51858 MIR4711-201ENST00000578274 70 ntBASIC1□□□□□ -2.25
HDGFP51858 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
HDGFP51858 RNU6-1174P-201ENST00000517278 101 ntBASIC0.99□□□□□ -2.25
HDGFP51858 MIR548AL-201ENST00000578416 97 ntBASIC0.99□□□□□ -2.25
HDGFP51858 AL445584.3-201ENST00000617173 78 ntBASIC0.99□□□□□ -2.25
HDGFP51858 Y_RNA.139-201ENST00000363464 102 ntBASIC0.98□□□□□ -2.25
HDGFP51858 AL451105.1-201ENST00000450005 189 ntBASIC0.98□□□□□ -2.25
HDGFP51858 RNU6-828P-201ENST00000364876 107 ntBASIC0.97□□□□□ -2.25
HDGFP51858 SNORD57-201ENST00000448188 72 ntBASIC0.97□□□□□ -2.25
HDGFP51858 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.97□□□□□ -2.25
HDGFP51858 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
HDGFP51858 Y_RNA.30-201ENST00000362572 97 ntBASIC0.95□□□□□ -2.26
HDGFP51858 MIR103A1-201ENST00000362165 78 ntBASIC0.94□□□□□ -2.26
HDGFP51858 AL391099.1-201ENST00000624635 187 ntBASIC0.94□□□□□ -2.26
HDGFP51858 RNA5SP98-201ENST00000363158 137 ntBASIC0.93□□□□□ -2.26
HDGFP51858 Y_RNA.115-201ENST00000363272 98 ntBASIC0.93□□□□□ -2.26
HDGFP51858 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HDGFP51858 RNU6-945P-201ENST00000383947 107 ntBASIC0.92□□□□□ -2.26
HDGFP51858 RNU6-863P-201ENST00000515989 104 ntBASIC0.92□□□□□ -2.26
HDGFP51858 RNA5SP330-201ENST00000517096 96 ntBASIC0.92□□□□□ -2.26
HDGFP51858 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HDGFP51858 RNU7-55P-201ENST00000459426 62 ntBASIC0.91□□□□□ -2.26
HDGFP51858 MTRNR2L9-201ENST00000622562 75 ntBASIC0.91□□□□□ -2.26
HDGFP51858 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
HDGFP51858 RNU6-1250P-201ENST00000391218 107 ntBASIC0.9□□□□□ -2.27
HDGFP51858 SNORD63.1-201ENST00000516178 80 ntBASIC0.9□□□□□ -2.27
HDGFP51858 MIR330-201ENST00000362196 94 ntBASIC0.89□□□□□ -2.27
HDGFP51858 RNU6-127P-201ENST00000390897 107 ntBASIC0.89□□□□□ -2.27
HDGFP51858 SNORA68.3-201ENST00000515906 83 ntBASIC0.89□□□□□ -2.27
HDGFP51858 MIR8087-201ENST00000612745 78 ntBASIC0.89□□□□□ -2.27
HDGFP51858 MIR8068-201ENST00000618032 68 ntBASIC0.89□□□□□ -2.27
HDGFP51858 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HDGFP51858 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
HDGFP51858 RNU6-1133P-201ENST00000410963 100 ntBASIC0.88□□□□□ -2.27
HDGFP51858 AC108740.1-201ENST00000498629 225 ntBASIC0.88□□□□□ -2.27
HDGFP51858 MIR3170-201ENST00000582699 77 ntBASIC0.88□□□□□ -2.27
HDGFP51858 MIR5704-201ENST00000584029 77 ntBASIC0.88□□□□□ -2.27
HDGFP51858 RNU6-815P-201ENST00000384080 113 ntBASIC0.87□□□□□ -2.27
HDGFP51858 MIR29B1-201ENST00000385015 81 ntBASIC0.86□□□□□ -2.27
HDGFP51858 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.86□□□□□ -2.27
HDGFP51858 SNORD63.2-201ENST00000516303 64 ntBASIC0.86□□□□□ -2.27
HDGFP51858 RNU6-973P-201ENST00000364690 107 ntBASIC0.85□□□□□ -2.27
HDGFP51858 MIR643-201ENST00000385267 97 ntBASIC0.85□□□□□ -2.27
HDGFP51858 uc_338.17-201ENST00000619633 179 ntBASIC0.85□□□□□ -2.27
HDGFP51858 MIR5087-201ENST00000635826 76 ntBASIC0.85□□□□□ -2.27
HDGFP51858 SNORA62.4-201ENST00000365504 151 ntBASIC0.84□□□□□ -2.27
HDGFP51858 RNU6-1008P-201ENST00000384160 104 ntBASIC0.84□□□□□ -2.27
HDGFP51858 RNU6-724P-201ENST00000390958 105 ntBASIC0.84□□□□□ -2.27
HDGFP51858 AC096531.1-201ENST00000419107 107 ntBASIC0.83□□□□□ -2.28
HDGFP51858 RNU6-900P-201ENST00000384498 102 ntBASIC0.82□□□□□ -2.28
HDGFP51858 Y_RNA.613-201ENST00000410726 97 ntBASIC0.82□□□□□ -2.28
HDGFP51858 MIR6514-201ENST00000622549 70 ntBASIC0.82□□□□□ -2.28
HDGFP51858 RNA5SP499-201ENST00000363982 119 ntBASIC0.81□□□□□ -2.28
HDGFP51858 RNU6-742P-201ENST00000365289 107 ntBASIC0.81□□□□□ -2.28
HDGFP51858 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
HDGFP51858 MIR6507-201ENST00000613630 70 ntBASIC0.81□□□□□ -2.28
HDGFP51858 RNU6-455P-201ENST00000384681 107 ntBASIC0.8□□□□□ -2.28
HDGFP51858 MIR548H2-201ENST00000408874 88 ntBASIC0.79□□□□□ -2.28
HDGFP51858 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
HDGFP51858 RNU6-1204P-201ENST00000363948 107 ntBASIC0.78□□□□□ -2.28
HDGFP51858 RNU6-258P-201ENST00000390884 101 ntBASIC0.78□□□□□ -2.28
HDGFP51858 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
HDGFP51858 SNORD45.2-201ENST00000363552 72 ntBASIC0.77□□□□□ -2.29
HDGFP51858 MIR124-2-201ENST00000385081 109 ntBASIC0.77□□□□□ -2.29
HDGFP51858 RNU6-530P-201ENST00000391180 107 ntBASIC0.77□□□□□ -2.29
HDGFP51858 RNU6-1238P-201ENST00000517215 102 ntBASIC0.77□□□□□ -2.29
HDGFP51858 MIRLET7D-201ENST00000362263 87 ntBASIC0.76□□□□□ -2.29
HDGFP51858 SNORD19-201ENST00000391191 68 ntBASIC0.76□□□□□ -2.29
HDGFP51858 Y_RNA.68-201ENST00000362881 102 ntBASIC0.75□□□□□ -2.29
HDGFP51858 RNA5SP257-201ENST00000363023 116 ntBASIC0.75□□□□□ -2.29
HDGFP51858 RNU6-721P-201ENST00000410155 105 ntBASIC0.75□□□□□ -2.29
HDGFP51858 RNA5SP163-201ENST00000410304 99 ntBASIC0.75□□□□□ -2.29
HDGFP51858 RNU6-732P-201ENST00000516033 103 ntBASIC0.75□□□□□ -2.29
HDGFP51858 MIR1197-201ENST00000408818 88 ntBASIC0.74□□□□□ -2.29
HDGFP51858 AC114737.2-201ENST00000421583 173 ntBASIC0.74□□□□□ -2.29
HDGFP51858 RNA5SP62-201ENST00000363457 110 ntBASIC0.73□□□□□ -2.29
HDGFP51858 MIR520D-201ENST00000385002 87 ntBASIC0.73□□□□□ -2.29
HDGFP51858 MIR6854-201ENST00000614935 69 ntBASIC0.73□□□□□ -2.29
HDGFP51858 RNU6-822P-201ENST00000362707 106 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms