Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 MIR3681-201ENST00000580089 72 ntBASIC-0.57□□□□□ -2.5
LIG4P49917 U4.4-201ENST00000620626 117 ntBASIC-0.57□□□□□ -2.5
LIG4P49917 RNA5SP26-201ENST00000362406 119 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 RNU6-153P-201ENST00000364422 104 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 RNU6-604P-201ENST00000390917 100 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 RNU6-129P-201ENST00000391022 107 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 AL021921.1-201ENST00000442774 93 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 MIR3675-201ENST00000583661 73 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 MIR4499-201ENST00000584834 69 ntBASIC-0.58□□□□□ -2.5
LIG4P49917 SNORD115-37-201ENST00000363768 82 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 RNU6-787P-201ENST00000384032 107 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 SNORA8.1-201ENST00000384250 140 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 SNORA26.4-201ENST00000391188 123 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 RNU6-587P-201ENST00000391282 106 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 RNU6-807P-201ENST00000516805 107 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 MIR4484-201ENST00000582855 83 ntBASIC-0.59□□□□□ -2.5
LIG4P49917 RNU4-61P-201ENST00000411243 107 ntBASIC-0.6□□□□□ -2.51
LIG4P49917 RNU6-789P-201ENST00000517105 102 ntBASIC-0.6□□□□□ -2.51
LIG4P49917 U7.5-201ENST00000517224 61 ntBASIC-0.6□□□□□ -2.51
LIG4P49917 MIR5588-201ENST00000581890 63 ntBASIC-0.6□□□□□ -2.51
LIG4P49917 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.6□□□□□ -2.51
LIG4P49917 RNU6-924P-201ENST00000362926 108 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 SNORD115-33-201ENST00000363723 82 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 SCARNA17-201ENST00000516183 144 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.61□□□□□ -2.51
LIG4P49917 SNORD45.1-201ENST00000363181 77 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 SNORD114-15-201ENST00000364687 72 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 RNU7-88P-201ENST00000458752 63 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 RNU7-171P-201ENST00000459581 62 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 RNU6-732P-201ENST00000516033 103 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.62□□□□□ -2.51
LIG4P49917 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.63□□□□□ -2.51
LIG4P49917 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.63□□□□□ -2.51
LIG4P49917 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.63□□□□□ -2.51
LIG4P49917 RNU6-315P-201ENST00000362666 107 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 SNORD45A-201ENST00000384512 84 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 SNORD116-24-201ENST00000384549 92 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 MIR29B1-201ENST00000385015 81 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 MIR4712-201ENST00000583750 82 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 MIR6818-201ENST00000621576 65 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.64□□□□□ -2.51
LIG4P49917 SNORD113.1-201ENST00000363280 73 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 RNU6-598P-201ENST00000364017 105 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 RNU6-458P-201ENST00000384179 107 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 MIR520D-201ENST00000385002 87 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 MIR548V-201ENST00000584165 80 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 U6.58-201ENST00000613107 107 ntBASIC-0.65□□□□□ -2.51
LIG4P49917 RNU6-698P-201ENST00000363523 107 ntBASIC-0.66□□□□□ -2.52
LIG4P49917 RNU6-34P-201ENST00000364874 107 ntBASIC-0.66□□□□□ -2.52
LIG4P49917 SNORD83B-201ENST00000386745 93 ntBASIC-0.66□□□□□ -2.52
LIG4P49917 uc_338.19-201ENST00000616808 99 ntBASIC-0.66□□□□□ -2.52
LIG4P49917 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 SNORD115-31-201ENST00000365318 82 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 SNORA41B-201ENST00000384785 128 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 SNORD113-2-201ENST00000391082 72 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 MIR4666B-201ENST00000578142 81 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 MIR1297-201ENST00000637311 77 ntBASIC-0.67□□□□□ -2.52
LIG4P49917 RNY1P1-201ENST00000364372 112 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 MIR630-201ENST00000384957 97 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
LIG4P49917 RNY4P30-201ENST00000410216 95 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 SNORD57-201ENST00000448188 72 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 RNY1P9-201ENST00000532431 109 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 MIR3134-201ENST00000579433 74 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 MIR5582-201ENST00000579697 68 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 MIR1245B-201ENST00000636115 69 ntBASIC-0.68□□□□□ -2.52
LIG4P49917 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 MIR548C-201ENST00000384815 97 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 AL353691.2-201ENST00000443795 59 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 MIR378F-201ENST00000578143 78 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 AC062037.1-201ENST00000605302 128 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 IGLL4P-201ENST00000614590 133 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 U2.18-201ENST00000622185 84 ntBASIC-0.69□□□□□ -2.52
LIG4P49917 MIR494-201ENST00000349529 81 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 RNU6-608P-201ENST00000383927 104 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 RNU6-696P-201ENST00000390834 107 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 MIR8485-201ENST00000401372 91 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 RNU6-687P-201ENST00000516443 89 ntBASIC-0.7□□□□□ -2.52
LIG4P49917 MIR5683-201ENST00000636514 76 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms