Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SNORA62.4-201ENST00000365504 151 ntBASIC0.94□□□□□ -2.26
PRIM1P49642 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.94□□□□□ -2.26
PRIM1P49642 MIR4711-201ENST00000578274 70 ntBASIC0.94□□□□□ -2.26
PRIM1P49642 MIR6866-201ENST00000638146 69 ntBASIC0.94□□□□□ -2.26
PRIM1P49642 AP000676.1-201ENST00000533307 52 ntBASIC0.93□□□□□ -2.26
PRIM1P49642 SNORD44.1-201ENST00000363202 61 ntBASIC0.92□□□□□ -2.26
PRIM1P49642 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.92□□□□□ -2.26
PRIM1P49642 MIR8087-201ENST00000612745 78 ntBASIC0.92□□□□□ -2.26
PRIM1P49642 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
PRIM1P49642 RNA5SP121-201ENST00000516537 101 ntBASIC0.91□□□□□ -2.26
PRIM1P49642 MIR548AG1-201ENST00000579932 66 ntBASIC0.91□□□□□ -2.26
PRIM1P49642 MIR4432-201ENST00000581823 84 ntBASIC0.91□□□□□ -2.26
PRIM1P49642 AC108676.2-201ENST00000605225 163 ntBASIC0.91□□□□□ -2.26
PRIM1P49642 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 RNU6-930P-201ENST00000390938 100 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 RNU6-995P-201ENST00000391244 107 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 AC108740.1-201ENST00000498629 225 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 RNU6-419P-201ENST00000517030 63 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.9□□□□□ -2.27
PRIM1P49642 HAR1A.1-201ENST00000459583 118 ntBASIC0.89□□□□□ -2.27
PRIM1P49642 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
PRIM1P49642 MIR548AA1-201ENST00000384971 97 ntBASIC0.88□□□□□ -2.27
PRIM1P49642 RNA5SP347-201ENST00000362445 119 ntBASIC0.87□□□□□ -2.27
PRIM1P49642 RNA5SP499-201ENST00000363982 119 ntBASIC0.87□□□□□ -2.27
PRIM1P49642 RNU6-696P-201ENST00000390834 107 ntBASIC0.87□□□□□ -2.27
PRIM1P49642 RNU6-1133P-201ENST00000410963 100 ntBASIC0.86□□□□□ -2.27
PRIM1P49642 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PRIM1P49642 RNU6-35P-201ENST00000384530 107 ntBASIC0.85□□□□□ -2.27
PRIM1P49642 RNU6-1206P-201ENST00000516339 103 ntBASIC0.85□□□□□ -2.27
PRIM1P49642 RNA5SP476-201ENST00000516613 103 ntBASIC0.85□□□□□ -2.27
PRIM1P49642 MIR4490-201ENST00000582647 84 ntBASIC0.85□□□□□ -2.27
PRIM1P49642 MIR892B-201ENST00000401279 77 ntBASIC0.84□□□□□ -2.27
PRIM1P49642 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
PRIM1P49642 RNU6-598P-201ENST00000364017 105 ntBASIC0.83□□□□□ -2.28
PRIM1P49642 RNU6-973P-201ENST00000364690 107 ntBASIC0.82□□□□□ -2.28
PRIM1P49642 RNU6-828P-201ENST00000364876 107 ntBASIC0.82□□□□□ -2.28
PRIM1P49642 RNU7-55P-201ENST00000459426 62 ntBASIC0.82□□□□□ -2.28
PRIM1P49642 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.82□□□□□ -2.28
PRIM1P49642 AL391099.1-201ENST00000624635 187 ntBASIC0.82□□□□□ -2.28
PRIM1P49642 RNU6-247P-201ENST00000362636 107 ntBASIC0.81□□□□□ -2.28
PRIM1P49642 RNU6-838P-201ENST00000363399 108 ntBASIC0.81□□□□□ -2.28
PRIM1P49642 RNU6-900P-201ENST00000384498 102 ntBASIC0.81□□□□□ -2.28
PRIM1P49642 RNU7-151P-201ENST00000516930 53 ntBASIC0.8□□□□□ -2.28
PRIM1P49642 CR383656.4-201ENST00000546909 122 ntBASIC0.8□□□□□ -2.28
PRIM1P49642 AC090625.1-201ENST00000357130 210 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 MIR148A-201ENST00000362215 68 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 SNORD45.2-201ENST00000363552 72 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 MIR329-2-201ENST00000385029 84 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 MIR1197-201ENST00000408818 88 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 RNU6-1262P-201ENST00000516217 96 ntBASIC0.79□□□□□ -2.28
PRIM1P49642 Y_RNA.69-201ENST00000362885 109 ntBASIC0.78□□□□□ -2.28
PRIM1P49642 RNU6-127P-201ENST00000390897 107 ntBASIC0.78□□□□□ -2.28
PRIM1P49642 MIR5087-201ENST00000635826 76 ntBASIC0.77□□□□□ -2.29
PRIM1P49642 MIR6086-201ENST00000638065 55 ntBASIC0.77□□□□□ -2.29
PRIM1P49642 MIRLET7D-201ENST00000362263 87 ntBASIC0.76□□□□□ -2.29
PRIM1P49642 RNU6-924P-201ENST00000362926 108 ntBASIC0.75□□□□□ -2.29
PRIM1P49642 U2.18-201ENST00000622185 84 ntBASIC0.75□□□□□ -2.29
PRIM1P49642 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.74□□□□□ -2.29
PRIM1P49642 SNORA68.3-201ENST00000515906 83 ntBASIC0.74□□□□□ -2.29
PRIM1P49642 MIR4743-201ENST00000584576 69 ntBASIC0.74□□□□□ -2.29
PRIM1P49642 MIR579-201ENST00000385221 98 ntBASIC0.73□□□□□ -2.29
PRIM1P49642 MIR548F3-201ENST00000408509 87 ntBASIC0.73□□□□□ -2.29
PRIM1P49642 AC096531.1-201ENST00000419107 107 ntBASIC0.73□□□□□ -2.29
PRIM1P49642 SNORD63.1-201ENST00000516178 80 ntBASIC0.73□□□□□ -2.29
PRIM1P49642 MIR6514-201ENST00000622549 70 ntBASIC0.73□□□□□ -2.29
PRIM1P49642 MIR125B1-201ENST00000385236 88 ntBASIC0.72□□□□□ -2.29
PRIM1P49642 Y_RNA.613-201ENST00000410726 97 ntBASIC0.72□□□□□ -2.29
PRIM1P49642 SNORD57-201ENST00000448188 72 ntBASIC0.72□□□□□ -2.29
PRIM1P49642 Y_RNA.698-201ENST00000516798 118 ntBASIC0.72□□□□□ -2.29
PRIM1P49642 AL445584.3-201ENST00000617173 78 ntBASIC0.72□□□□□ -2.29
PRIM1P49642 SNORA62.5-201ENST00000516634 120 ntBASIC0.71□□□□□ -2.3
PRIM1P49642 AC069113.3-201ENST00000521019 150 ntBASIC0.71□□□□□ -2.3
PRIM1P49642 MIR2909-201ENST00000617113 69 ntBASIC0.71□□□□□ -2.3
PRIM1P49642 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
PRIM1P49642 AL451105.1-201ENST00000450005 189 ntBASIC0.7□□□□□ -2.3
PRIM1P49642 RNU6-1327P-201ENST00000365302 105 ntBASIC0.69□□□□□ -2.3
PRIM1P49642 RNU6-180P-201ENST00000516697 61 ntBASIC0.69□□□□□ -2.3
PRIM1P49642 U7.5-201ENST00000517224 61 ntBASIC0.69□□□□□ -2.3
PRIM1P49642 MIR6888-201ENST00000621977 67 ntBASIC0.69□□□□□ -2.3
PRIM1P49642 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
PRIM1P49642 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
PRIM1P49642 RNA5SP285-201ENST00000516619 119 ntBASIC0.68□□□□□ -2.3
PRIM1P49642 MIR4464-201ENST00000580818 92 ntBASIC0.68□□□□□ -2.3
PRIM1P49642 AC104408.1-201ENST00000605241 170 ntBASIC0.68□□□□□ -2.3
PRIM1P49642 RNU6-815P-201ENST00000384080 113 ntBASIC0.67□□□□□ -2.3
PRIM1P49642 RNU6-455P-201ENST00000384681 107 ntBASIC0.67□□□□□ -2.3
PRIM1P49642 RNU6-1174P-201ENST00000517278 101 ntBASIC0.67□□□□□ -2.3
PRIM1P49642 Y_RNA.321-201ENST00000365149 102 ntBASIC0.66□□□□□ -2.3
PRIM1P49642 MIR610-201ENST00000385139 96 ntBASIC0.65□□□□□ -2.31
PRIM1P49642 MIR4315-1-201ENST00000636800 73 ntBASIC0.65□□□□□ -2.31
PRIM1P49642 MIR4315-2-201ENST00000640925 73 ntBASIC0.65□□□□□ -2.31
PRIM1P49642 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
PRIM1P49642 AC114737.2-201ENST00000421583 173 ntBASIC0.64□□□□□ -2.31
PRIM1P49642 uc_338.36-201ENST00000622331 158 ntBASIC0.64□□□□□ -2.31
PRIM1P49642 MIR643-201ENST00000385267 97 ntBASIC0.63□□□□□ -2.31
PRIM1P49642 RNA5SP163-201ENST00000410304 99 ntBASIC0.63□□□□□ -2.31
PRIM1P49642 RNU6-1267P-201ENST00000410747 107 ntBASIC0.62□□□□□ -2.31
PRIM1P49642 VTRNA1-3-201ENST00000365645 89 ntBASIC0.61□□□□□ -2.31
PRIM1P49642 RNU6-901P-201ENST00000384593 106 ntBASIC0.61□□□□□ -2.31
PRIM1P49642 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms