Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RNU6-1250P-201ENST00000391218 107 ntBASIC0.64□□□□□ -2.31
CTGFP29279 MIR3925-201ENST00000584674 77 ntBASIC0.64□□□□□ -2.31
CTGFP29279 MIR499B-201ENST00000636498 73 ntBASIC0.64□□□□□ -2.31
CTGFP29279 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
CTGFP29279 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CTGFP29279 RNU6-1262P-201ENST00000516217 96 ntBASIC0.63□□□□□ -2.31
CTGFP29279 U7.5-201ENST00000517224 61 ntBASIC0.63□□□□□ -2.31
CTGFP29279 MIR4464-201ENST00000580818 92 ntBASIC0.63□□□□□ -2.31
CTGFP29279 MIR4432-201ENST00000581823 84 ntBASIC0.63□□□□□ -2.31
CTGFP29279 MIR4677-201ENST00000584153 80 ntBASIC0.63□□□□□ -2.31
CTGFP29279 uc_338.36-201ENST00000622331 158 ntBASIC0.63□□□□□ -2.31
CTGFP29279 RNU7-154P-201ENST00000516194 62 ntBASIC0.62□□□□□ -2.31
CTGFP29279 MIR6888-201ENST00000621977 67 ntBASIC0.62□□□□□ -2.31
CTGFP29279 Y_RNA.139-201ENST00000363464 102 ntBASIC0.61□□□□□ -2.31
CTGFP29279 SNORA40.8-201ENST00000411034 126 ntBASIC0.61□□□□□ -2.31
CTGFP29279 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
CTGFP29279 RNU6-1206P-201ENST00000516339 103 ntBASIC0.61□□□□□ -2.31
CTGFP29279 AP000676.1-201ENST00000533307 52 ntBASIC0.61□□□□□ -2.31
CTGFP29279 MTRNR2L9-201ENST00000622562 75 ntBASIC0.61□□□□□ -2.31
CTGFP29279 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
CTGFP29279 SNORA2A-201ENST00000383885 135 ntBASIC0.6□□□□□ -2.31
CTGFP29279 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
CTGFP29279 SNORD115-23-201ENST00000364461 82 ntBASIC0.59□□□□□ -2.31
CTGFP29279 RNU6-742P-201ENST00000365289 107 ntBASIC0.59□□□□□ -2.31
CTGFP29279 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
CTGFP29279 MIR125B1-201ENST00000385236 88 ntBASIC0.59□□□□□ -2.31
CTGFP29279 RNU6-258P-201ENST00000390884 101 ntBASIC0.59□□□□□ -2.31
CTGFP29279 MIR5706-201ENST00000579841 80 ntBASIC0.59□□□□□ -2.31
CTGFP29279 MIR8068-201ENST00000618032 68 ntBASIC0.59□□□□□ -2.31
CTGFP29279 RNU6-247P-201ENST00000362636 107 ntBASIC0.58□□□□□ -2.32
CTGFP29279 SNORD114-29-201ENST00000364819 70 ntBASIC0.58□□□□□ -2.32
CTGFP29279 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
CTGFP29279 MIR760-201ENST00000390220 80 ntBASIC0.58□□□□□ -2.32
CTGFP29279 RNU7-129P-201ENST00000516128 62 ntBASIC0.58□□□□□ -2.32
CTGFP29279 MIR548AL-201ENST00000578416 97 ntBASIC0.58□□□□□ -2.32
CTGFP29279 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CTGFP29279 MIR29B1-201ENST00000385015 81 ntBASIC0.57□□□□□ -2.32
CTGFP29279 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
CTGFP29279 MIR5704-201ENST00000584029 77 ntBASIC0.57□□□□□ -2.32
CTGFP29279 AC108676.2-201ENST00000605225 163 ntBASIC0.57□□□□□ -2.32
CTGFP29279 AC084368.1-201ENST00000620935 65 ntBASIC0.57□□□□□ -2.32
CTGFP29279 VTRNA1-3-201ENST00000365645 89 ntBASIC0.56□□□□□ -2.32
CTGFP29279 RNU6-1174P-201ENST00000517278 101 ntBASIC0.56□□□□□ -2.32
CTGFP29279 AC138207.3-201ENST00000585289 166 ntBASIC0.56□□□□□ -2.32
CTGFP29279 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.56□□□□□ -2.32
CTGFP29279 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
CTGFP29279 MIR329-2-201ENST00000385029 84 ntBASIC0.55□□□□□ -2.32
CTGFP29279 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.55□□□□□ -2.32
CTGFP29279 MIR520D-201ENST00000385002 87 ntBASIC0.54□□□□□ -2.32
CTGFP29279 MIR548H4-201ENST00000408689 111 ntBASIC0.54□□□□□ -2.32
CTGFP29279 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
CTGFP29279 SNORD57-201ENST00000448188 72 ntBASIC0.54□□□□□ -2.32
CTGFP29279 AL451105.1-201ENST00000450005 189 ntBASIC0.54□□□□□ -2.32
CTGFP29279 HAR1A.1-201ENST00000459583 118 ntBASIC0.54□□□□□ -2.32
CTGFP29279 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.54□□□□□ -2.32
CTGFP29279 AL445584.3-201ENST00000617173 78 ntBASIC0.54□□□□□ -2.32
CTGFP29279 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
CTGFP29279 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
CTGFP29279 SNORD63.2-201ENST00000516303 64 ntBASIC0.53□□□□□ -2.32
CTGFP29279 RNA5SP470-201ENST00000516463 106 ntBASIC0.53□□□□□ -2.32
CTGFP29279 SCARNA11.2-201ENST00000517183 154 ntBASIC0.53□□□□□ -2.32
CTGFP29279 RNU6-696P-201ENST00000390834 107 ntBASIC0.52□□□□□ -2.33
CTGFP29279 MIR3170-201ENST00000582699 77 ntBASIC0.52□□□□□ -2.33
CTGFP29279 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
CTGFP29279 MIR548AA1-201ENST00000384971 97 ntBASIC0.51□□□□□ -2.33
CTGFP29279 MIR876-201ENST00000401147 81 ntBASIC0.51□□□□□ -2.33
CTGFP29279 RNU6-721P-201ENST00000410155 105 ntBASIC0.51□□□□□ -2.33
CTGFP29279 RNU7-160P-201ENST00000516660 62 ntBASIC0.51□□□□□ -2.33
CTGFP29279 AP002795.1-201ENST00000534879 84 ntBASIC0.51□□□□□ -2.33
CTGFP29279 RNU6-828P-201ENST00000364876 107 ntBASIC0.5□□□□□ -2.33
CTGFP29279 RNU6-530P-201ENST00000391180 107 ntBASIC0.5□□□□□ -2.33
CTGFP29279 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
CTGFP29279 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
CTGFP29279 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CTGFP29279 SNORD44.1-201ENST00000363202 61 ntBASIC0.49□□□□□ -2.33
CTGFP29279 MIR643-201ENST00000385267 97 ntBASIC0.49□□□□□ -2.33
CTGFP29279 SNORD19-201ENST00000391191 68 ntBASIC0.49□□□□□ -2.33
CTGFP29279 RNU6-822P-201ENST00000362707 106 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-815P-201ENST00000384080 113 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNA5SP63-201ENST00000391225 112 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-995P-201ENST00000391244 107 ntBASIC0.48□□□□□ -2.33
CTGFP29279 MIR548H2-201ENST00000408874 88 ntBASIC0.48□□□□□ -2.33
CTGFP29279 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-848P-201ENST00000515948 107 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-617P-201ENST00000516147 107 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-473P-201ENST00000516164 107 ntBASIC0.48□□□□□ -2.33
CTGFP29279 RNU6-1049P-201ENST00000516414 107 ntBASIC0.48□□□□□ -2.33
CTGFP29279 AC023932.2-201ENST00000603176 175 ntBASIC0.48□□□□□ -2.33
CTGFP29279 AL391099.1-201ENST00000624635 187 ntBASIC0.48□□□□□ -2.33
CTGFP29279 MIR429-201ENST00000362106 83 ntBASIC0.47□□□□□ -2.33
CTGFP29279 RNU6-59P-201ENST00000384787 107 ntBASIC0.47□□□□□ -2.33
CTGFP29279 RNU6-127P-201ENST00000390897 107 ntBASIC0.47□□□□□ -2.33
CTGFP29279 SNORD63.1-201ENST00000516178 80 ntBASIC0.47□□□□□ -2.33
CTGFP29279 Y_RNA.206-201ENST00000364136 102 ntBASIC0.46□□□□□ -2.34
CTGFP29279 MIR124-2-201ENST00000385081 109 ntBASIC0.46□□□□□ -2.34
CTGFP29279 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
CTGFP29279 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
CTGFP29279 snoR1.1-201ENST00000628177 80 ntBASIC0.46□□□□□ -2.34
CTGFP29279 U6.103-201ENST00000637085 61 ntBASIC0.46□□□□□ -2.34
CTGFP29279 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms