Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU6-303P-201ENST00000517091 106 ntBASIC-0.96□□□□□ -2.56
PTPN4P29074 RNU6-844P-201ENST00000517175 102 ntBASIC-0.96□□□□□ -2.56
PTPN4P29074 U4.2-201ENST00000618561 85 ntBASIC-0.96□□□□□ -2.56
PTPN4P29074 SNORD114-25-201ENST00000363742 72 ntBASIC-0.97□□□□□ -2.56
PTPN4P29074 SNORD114-17-201ENST00000364699 75 ntBASIC-0.97□□□□□ -2.56
PTPN4P29074 RNU6-686P-201ENST00000364839 107 ntBASIC-0.97□□□□□ -2.56
PTPN4P29074 AL021921.1-201ENST00000442774 93 ntBASIC-0.97□□□□□ -2.56
PTPN4P29074 RNU6-924P-201ENST00000362926 108 ntBASIC-0.98□□□□□ -2.57
PTPN4P29074 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.98□□□□□ -2.57
PTPN4P29074 MIR147A-201ENST00000385079 72 ntBASIC-0.98□□□□□ -2.57
PTPN4P29074 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 RNU6-478P-201ENST00000363904 110 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 RNU6-44P-201ENST00000384045 107 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 RNU6-129P-201ENST00000391022 107 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 AL500527.2-201ENST00000454105 95 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 MIR548AI-201ENST00000579940 88 ntBASIC-0.99□□□□□ -2.57
PTPN4P29074 MIRLET7A1-201ENST00000362295 80 ntBASIC-1□□□□□ -2.57
PTPN4P29074 RNU6-330P-201ENST00000363015 107 ntBASIC-1□□□□□ -2.57
PTPN4P29074 RNU6-645P-201ENST00000364649 106 ntBASIC-1□□□□□ -2.57
PTPN4P29074 RNU6-431P-201ENST00000383874 107 ntBASIC-1□□□□□ -2.57
PTPN4P29074 AC074348.1-201ENST00000426503 132 ntBASIC-1□□□□□ -2.57
PTPN4P29074 MIR3675-201ENST00000583661 73 ntBASIC-1□□□□□ -2.57
PTPN4P29074 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
PTPN4P29074 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.01□□□□□ -2.57
PTPN4P29074 SNORA8.1-201ENST00000384250 140 ntBASIC-1.01□□□□□ -2.57
PTPN4P29074 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
PTPN4P29074 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
PTPN4P29074 AC006160.2-201ENST00000637708 154 ntBASIC-1.01□□□□□ -2.57
PTPN4P29074 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 RNU6-168P-201ENST00000516189 101 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.02□□□□□ -2.57
PTPN4P29074 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.03□□□□□ -2.57
PTPN4P29074 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.03□□□□□ -2.57
PTPN4P29074 RNU6-807P-201ENST00000516805 107 ntBASIC-1.03□□□□□ -2.57
PTPN4P29074 MIR1285-2-201ENST00000408311 88 ntBASIC-1.04□□□□□ -2.58
PTPN4P29074 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.04□□□□□ -2.58
PTPN4P29074 RNA5SP180-201ENST00000516181 101 ntBASIC-1.04□□□□□ -2.58
PTPN4P29074 MIR4499-201ENST00000584834 69 ntBASIC-1.04□□□□□ -2.58
PTPN4P29074 MIR365A-201ENST00000362260 87 ntBASIC-1.05□□□□□ -2.58
PTPN4P29074 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.05□□□□□ -2.58
PTPN4P29074 RNA5SP89-201ENST00000410300 108 ntBASIC-1.05□□□□□ -2.58
PTPN4P29074 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.05□□□□□ -2.58
PTPN4P29074 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.05□□□□□ -2.58
PTPN4P29074 RNU6-49P-201ENST00000384256 107 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 RNU6-604P-201ENST00000390917 100 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 MIR548AG1-201ENST00000579932 66 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 uc_338.19-201ENST00000616808 99 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 MIR382-201ENST00000637119 76 ntBASIC-1.06□□□□□ -2.58
PTPN4P29074 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.07□□□□□ -2.58
PTPN4P29074 U2.22-201ENST00000636441 106 ntBASIC-1.07□□□□□ -2.58
PTPN4P29074 MIR1297-201ENST00000637311 77 ntBASIC-1.07□□□□□ -2.58
PTPN4P29074 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.08□□□□□ -2.58
PTPN4P29074 SNORD114-3-201ENST00000364969 75 ntBASIC-1.08□□□□□ -2.58
PTPN4P29074 MIR548C-201ENST00000384815 97 ntBASIC-1.08□□□□□ -2.58
PTPN4P29074 SNORA26.4-201ENST00000391188 123 ntBASIC-1.08□□□□□ -2.58
PTPN4P29074 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
PTPN4P29074 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.09□□□□□ -2.58
PTPN4P29074 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.09□□□□□ -2.58
PTPN4P29074 SNORD45.1-201ENST00000363181 77 ntBASIC-1.09□□□□□ -2.58
PTPN4P29074 SNORD115-33-201ENST00000363723 82 ntBASIC-1.09□□□□□ -2.58
PTPN4P29074 MIR4484-201ENST00000582855 83 ntBASIC-1.09□□□□□ -2.58
PTPN4P29074 RNY1P1-201ENST00000364372 112 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 MIR1207-201ENST00000408249 87 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 RNU6-380P-201ENST00000410207 107 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 RNU6-982P-201ENST00000516216 102 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 IGLL4P-201ENST00000614590 133 ntBASIC-1.1□□□□□ -2.59
PTPN4P29074 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.11□□□□□ -2.59
PTPN4P29074 SNORD63.1-201ENST00000516178 80 ntBASIC-1.11□□□□□ -2.59
PTPN4P29074 MIR5588-201ENST00000581890 63 ntBASIC-1.11□□□□□ -2.59
PTPN4P29074 MIR4306-201ENST00000583390 91 ntBASIC-1.11□□□□□ -2.59
PTPN4P29074 RNU6-315P-201ENST00000362666 107 ntBASIC-1.12□□□□□ -2.59
PTPN4P29074 RNU6-246P-201ENST00000384702 107 ntBASIC-1.12□□□□□ -2.59
PTPN4P29074 RNU7-174P-201ENST00000516248 59 ntBASIC-1.12□□□□□ -2.59
PTPN4P29074 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.12□□□□□ -2.59
PTPN4P29074 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
PTPN4P29074 RNU6-979P-201ENST00000383896 107 ntBASIC-1.13□□□□□ -2.59
PTPN4P29074 SNORD115-22-201ENST00000364456 82 ntBASIC-1.14□□□□□ -2.59
PTPN4P29074 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
PTPN4P29074 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.14□□□□□ -2.59
PTPN4P29074 RNU6-153P-201ENST00000364422 104 ntBASIC-1.15□□□□□ -2.59
PTPN4P29074 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.15□□□□□ -2.59
PTPN4P29074 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
PTPN4P29074 RNU6-732P-201ENST00000516033 103 ntBASIC-1.15□□□□□ -2.59
PTPN4P29074 U7.5-201ENST00000517224 61 ntBASIC-1.15□□□□□ -2.59
PTPN4P29074 RNY4P30-201ENST00000410216 95 ntBASIC-1.16□□□□□ -2.6
PTPN4P29074 RNU7-88P-201ENST00000458752 63 ntBASIC-1.16□□□□□ -2.6
PTPN4P29074 MIR1246-201ENST00000636535 73 ntBASIC-1.16□□□□□ -2.6
PTPN4P29074 AL353691.2-201ENST00000443795 59 ntBASIC-1.17□□□□□ -2.6
PTPN4P29074 RNU6-706P-201ENST00000517229 104 ntBASIC-1.17□□□□□ -2.6
PTPN4P29074 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.18□□□□□ -2.6
PTPN4P29074 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.18□□□□□ -2.6
PTPN4P29074 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.18□□□□□ -2.6
PTPN4P29074 RNU7-171P-201ENST00000459581 62 ntBASIC-1.18□□□□□ -2.6
PTPN4P29074 MIR8053-201ENST00000613344 75 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms