Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
POLR2AP24928 AP000676.1-201ENST00000533307 52 ntBASIC0.33□□□□□ -2.36
POLR2AP24928 MIR6086-201ENST00000638065 55 ntBASIC0.33□□□□□ -2.36
POLR2AP24928 SNORD115-23-201ENST00000364461 82 ntBASIC0.32□□□□□ -2.36
POLR2AP24928 RNA5SP214-201ENST00000363378 118 ntBASIC0.32□□□□□ -2.36
POLR2AP24928 Y_RNA.282-201ENST00000364793 102 ntBASIC0.32□□□□□ -2.36
POLR2AP24928 Y_RNA.74-201ENST00000362911 99 ntBASIC0.31□□□□□ -2.36
POLR2AP24928 MIR4667-201ENST00000578933 66 ntBASIC0.31□□□□□ -2.36
POLR2AP24928 U6.96-201ENST00000636425 70 ntBASIC0.31□□□□□ -2.36
POLR2AP24928 RNU6-180P-201ENST00000516697 61 ntBASIC0.3□□□□□ -2.36
POLR2AP24928 RNU6-829P-201ENST00000363700 112 ntBASIC0.29□□□□□ -2.36
POLR2AP24928 MIR5589-201ENST00000579442 60 ntBASIC0.29□□□□□ -2.36
POLR2AP24928 SNORD114-9-201ENST00000364370 72 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 SNORA41B-201ENST00000384785 128 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 RNA5SP285-201ENST00000516619 119 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 U7.5-201ENST00000517224 61 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 MIR6854-201ENST00000614935 69 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 SNORA42.1-201ENST00000363515 137 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 MIR633-201ENST00000384821 98 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 RNA5SP163-201ENST00000410304 99 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 AL391099.1-201ENST00000624635 187 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 snoR1.1-201ENST00000628177 80 ntBASIC0.28□□□□□ -2.36
POLR2AP24928 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
POLR2AP24928 MIR527-201ENST00000385244 85 ntBASIC0.26□□□□□ -2.37
POLR2AP24928 RNU6-1262P-201ENST00000516217 96 ntBASIC0.26□□□□□ -2.37
POLR2AP24928 Y_RNA.698-201ENST00000516798 118 ntBASIC0.26□□□□□ -2.37
POLR2AP24928 RNU7-165P-201ENST00000458864 60 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 MIR429-201ENST00000362106 83 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 SNORD1B-201ENST00000363091 84 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 RNA5SP470-201ENST00000516463 106 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 MIR4636-201ENST00000582271 80 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.25□□□□□ -2.37
POLR2AP24928 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
POLR2AP24928 RNU7-119P-201ENST00000459279 63 ntBASIC0.24□□□□□ -2.37
POLR2AP24928 SNORD63.1-201ENST00000516178 80 ntBASIC0.24□□□□□ -2.37
POLR2AP24928 RNU6-246P-201ENST00000384702 107 ntBASIC0.23□□□□□ -2.37
POLR2AP24928 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.23□□□□□ -2.37
POLR2AP24928 RNU7-151P-201ENST00000516930 53 ntBASIC0.23□□□□□ -2.37
POLR2AP24928 RNU6-1079P-201ENST00000362861 110 ntBASIC0.22□□□□□ -2.37
POLR2AP24928 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
POLR2AP24928 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
POLR2AP24928 MIR517B-201ENST00000385102 67 ntBASIC0.21□□□□□ -2.38
POLR2AP24928 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
POLR2AP24928 AL445584.3-201ENST00000617173 78 ntBASIC0.21□□□□□ -2.38
POLR2AP24928 AC244250.2-201ENST00000418731 148 ntBASIC0.2□□□□□ -2.38
POLR2AP24928 RNU7-55P-201ENST00000459426 62 ntBASIC0.2□□□□□ -2.38
POLR2AP24928 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.2□□□□□ -2.38
POLR2AP24928 SNORD56B-201ENST00000384713 71 ntBASIC0.19□□□□□ -2.38
POLR2AP24928 MIR548X-201ENST00000580069 75 ntBASIC0.19□□□□□ -2.38
POLR2AP24928 SNORA40B-201ENST00000385573 128 ntBASIC0.19□□□□□ -2.38
POLR2AP24928 RNU6-696P-201ENST00000390834 107 ntBASIC0.19□□□□□ -2.38
POLR2AP24928 RNU6-458P-201ENST00000384179 107 ntBASIC0.18□□□□□ -2.38
POLR2AP24928 RNU6-455P-201ENST00000384681 107 ntBASIC0.18□□□□□ -2.38
POLR2AP24928 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
POLR2AP24928 U6.58-201ENST00000613107 107 ntBASIC0.18□□□□□ -2.38
POLR2AP24928 RNU6-900P-201ENST00000384498 102 ntBASIC0.17□□□□□ -2.38
POLR2AP24928 MIR548AA1-201ENST00000384971 97 ntBASIC0.17□□□□□ -2.38
POLR2AP24928 RNU6-1133P-201ENST00000410963 100 ntBASIC0.17□□□□□ -2.38
POLR2AP24928 MIR6514-201ENST00000622549 70 ntBASIC0.17□□□□□ -2.38
POLR2AP24928 RNU7-88P-201ENST00000458752 63 ntBASIC0.16□□□□□ -2.38
POLR2AP24928 MIR466-201ENST00000580653 84 ntBASIC0.16□□□□□ -2.38
POLR2AP24928 MIR4290-201ENST00000583807 95 ntBASIC0.16□□□□□ -2.38
POLR2AP24928 MIR8068-201ENST00000618032 68 ntBASIC0.16□□□□□ -2.38
POLR2AP24928 SNORD114-12-201ENST00000365400 75 ntBASIC0.15□□□□□ -2.38
POLR2AP24928 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.38
POLR2AP24928 RNU6-929P-201ENST00000384429 107 ntBASIC0.15□□□□□ -2.38
POLR2AP24928 SNORD18.2-201ENST00000459604 70 ntBASIC0.15□□□□□ -2.38
POLR2AP24928 Y_RNA.236-201ENST00000364427 111 ntBASIC0.15□□□□□ -2.39
POLR2AP24928 MIR548C-201ENST00000384815 97 ntBASIC0.15□□□□□ -2.39
POLR2AP24928 SNORD116.2-201ENST00000391251 93 ntBASIC0.15□□□□□ -2.39
POLR2AP24928 SNORA40.16-201ENST00000517238 121 ntBASIC0.15□□□□□ -2.39
POLR2AP24928 AL353803.5-201ENST00000599815 141 ntBASIC0.15□□□□□ -2.39
POLR2AP24928 RNU6-901P-201ENST00000384593 106 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 RNU6-1246P-201ENST00000391064 107 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 AC114755.3-201ENST00000481111 251 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 RNU6-518P-201ENST00000516056 96 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 RNA5SP134-201ENST00000516492 96 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 MIR4802-201ENST00000581881 80 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 RNU6-446P-201ENST00000362827 106 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 SNORD114-5-201ENST00000362928 70 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 SNORA62.4-201ENST00000365504 151 ntBASIC0.14□□□□□ -2.39
POLR2AP24928 AC108676.2-201ENST00000605225 163 ntBASIC0.13□□□□□ -2.39
POLR2AP24928 uc_338.36-201ENST00000622331 158 ntBASIC0.12□□□□□ -2.39
POLR2AP24928 RNU4-33P-201ENST00000364316 85 ntBASIC0.12□□□□□ -2.39
POLR2AP24928 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
POLR2AP24928 MIR4280-201ENST00000582178 76 ntBASIC0.11□□□□□ -2.39
POLR2AP24928 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
POLR2AP24928 RNU6-924P-201ENST00000362926 108 ntBASIC0.1□□□□□ -2.39
POLR2AP24928 MIR6888-201ENST00000621977 67 ntBASIC0.1□□□□□ -2.39
POLR2AP24928 MIR1295B-201ENST00000636144 60 ntBASIC0.1□□□□□ -2.39
POLR2AP24928 SNORA18.1-201ENST00000363418 128 ntBASIC0.09□□□□□ -2.39
POLR2AP24928 SNORD113-4-201ENST00000364802 75 ntBASIC0.09□□□□□ -2.39
POLR2AP24928 RNU6-122P-201ENST00000516818 107 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 MIR548AG1-201ENST00000579932 66 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 MIR4263-201ENST00000584745 83 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 RNU6-973P-201ENST00000364690 107 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.08□□□□□ -2.4
POLR2AP24928 MIR4464-201ENST00000580818 92 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 280 ms