Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
COL9A1P20849 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
COL9A1P20849 MIR6507-201ENST00000613630 70 ntBASIC1.32□□□□□ -2.2
COL9A1P20849 RNU6-530P-201ENST00000391180 107 ntBASIC1.31□□□□□ -2.2
COL9A1P20849 MIR4677-201ENST00000584153 80 ntBASIC1.31□□□□□ -2.2
COL9A1P20849 SNORA25.18-201ENST00000607153 114 ntBASIC1.31□□□□□ -2.2
COL9A1P20849 AC084368.1-201ENST00000620935 65 ntBASIC1.31□□□□□ -2.2
COL9A1P20849 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
COL9A1P20849 RNU6-1036P-201ENST00000383959 104 ntBASIC1.3□□□□□ -2.2
COL9A1P20849 SNORD71-201ENST00000411292 86 ntBASIC1.3□□□□□ -2.2
COL9A1P20849 RNA5SP285-201ENST00000516619 119 ntBASIC1.3□□□□□ -2.2
COL9A1P20849 MTRNR2L9-201ENST00000622562 75 ntBASIC1.3□□□□□ -2.2
COL9A1P20849 MIR373-201ENST00000362273 69 ntBASIC1.29□□□□□ -2.2
COL9A1P20849 AL353803.5-201ENST00000599815 141 ntBASIC1.29□□□□□ -2.2
COL9A1P20849 snoU13.19-201ENST00000459148 104 ntBASIC1.28□□□□□ -2.2
COL9A1P20849 ACA64.5-201ENST00000516207 127 ntBASIC1.28□□□□□ -2.2
COL9A1P20849 MIR6513-201ENST00000621188 64 ntBASIC1.28□□□□□ -2.2
COL9A1P20849 Y_RNA.321-201ENST00000365149 102 ntBASIC1.27□□□□□ -2.21
COL9A1P20849 Y_RNA.423-201ENST00000384057 113 ntBASIC1.27□□□□□ -2.21
COL9A1P20849 SNORD57-201ENST00000448188 72 ntBASIC1.27□□□□□ -2.21
COL9A1P20849 MIR936-201ENST00000401264 98 ntBASIC1.26□□□□□ -2.21
COL9A1P20849 MIR548T-201ENST00000408369 74 ntBASIC1.26□□□□□ -2.21
COL9A1P20849 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
COL9A1P20849 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.25□□□□□ -2.21
COL9A1P20849 MIR501-201ENST00000390204 84 ntBASIC1.25□□□□□ -2.21
COL9A1P20849 SNORD63.2-201ENST00000516303 64 ntBASIC1.25□□□□□ -2.21
COL9A1P20849 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
COL9A1P20849 SNORD115-23-201ENST00000364461 82 ntBASIC1.23□□□□□ -2.21
COL9A1P20849 MIR518A1-201ENST00000385068 85 ntBASIC1.23□□□□□ -2.21
COL9A1P20849 RNU6-1232P-201ENST00000516299 86 ntBASIC1.23□□□□□ -2.21
COL9A1P20849 MIR4714-201ENST00000580728 77 ntBASIC1.22□□□□□ -2.21
COL9A1P20849 MIR3170-201ENST00000582699 77 ntBASIC1.22□□□□□ -2.21
COL9A1P20849 AC108676.2-201ENST00000605225 163 ntBASIC1.22□□□□□ -2.21
COL9A1P20849 MIR2909-201ENST00000617113 69 ntBASIC1.22□□□□□ -2.21
COL9A1P20849 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
COL9A1P20849 RNU6-1091P-201ENST00000363945 107 ntBASIC1.21□□□□□ -2.22
COL9A1P20849 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.21□□□□□ -2.22
COL9A1P20849 MIR4426-201ENST00000640330 63 ntBASIC1.21□□□□□ -2.22
COL9A1P20849 RNU6-30P-201ENST00000384561 107 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 MIR876-201ENST00000401147 81 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 MIR1468-201ENST00000410600 86 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 SNORD63.1-201ENST00000516178 80 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 MIR4636-201ENST00000582271 80 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 RN7SL660P-201ENST00000614852 299 ntBASIC1.2□□□□□ -2.22
COL9A1P20849 MIR608-201ENST00000384820 100 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 MIR106A-201ENST00000384870 81 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 MIR760-201ENST00000390220 80 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 Y_RNA.698-201ENST00000516798 118 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 U7.5-201ENST00000517224 61 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 RNU6-1174P-201ENST00000517278 101 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 MIR6755-201ENST00000619993 66 ntBASIC1.19□□□□□ -2.22
COL9A1P20849 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
COL9A1P20849 RNU6-300P-201ENST00000459080 104 ntBASIC1.18□□□□□ -2.22
COL9A1P20849 snoR1.1-201ENST00000628177 80 ntBASIC1.18□□□□□ -2.22
COL9A1P20849 RNU6-863P-201ENST00000515989 104 ntBASIC1.17□□□□□ -2.22
COL9A1P20849 AC104408.1-201ENST00000605241 170 ntBASIC1.17□□□□□ -2.22
COL9A1P20849 RNU6-361P-201ENST00000364454 107 ntBASIC1.16□□□□□ -2.22
COL9A1P20849 RNA5SP128-201ENST00000365305 116 ntBASIC1.16□□□□□ -2.22
COL9A1P20849 RNU6-110P-201ENST00000384508 104 ntBASIC1.16□□□□□ -2.22
COL9A1P20849 MIR4432-201ENST00000581823 84 ntBASIC1.16□□□□□ -2.22
COL9A1P20849 RNU7-88P-201ENST00000458752 63 ntBASIC1.15□□□□□ -2.23
COL9A1P20849 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
COL9A1P20849 RNU6-258P-201ENST00000390884 101 ntBASIC1.14□□□□□ -2.23
COL9A1P20849 RNU6-1111P-201ENST00000391118 107 ntBASIC1.14□□□□□ -2.23
COL9A1P20849 AP000676.1-201ENST00000533307 52 ntBASIC1.14□□□□□ -2.23
COL9A1P20849 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
COL9A1P20849 SNORA27.2-201ENST00000363365 126 ntBASIC1.13□□□□□ -2.23
COL9A1P20849 RNU4-54P-201ENST00000516428 129 ntBASIC1.13□□□□□ -2.23
COL9A1P20849 MIR3925-201ENST00000584674 77 ntBASIC1.13□□□□□ -2.23
COL9A1P20849 Y_RNA.519-201ENST00000384553 102 ntBASIC1.12□□□□□ -2.23
COL9A1P20849 RNU6-176P-201ENST00000517196 105 ntBASIC1.12□□□□□ -2.23
COL9A1P20849 RNY1P9-201ENST00000532431 109 ntBASIC1.12□□□□□ -2.23
COL9A1P20849 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
COL9A1P20849 SNORA62.4-201ENST00000365504 151 ntBASIC1.11□□□□□ -2.23
COL9A1P20849 MIR4723-201ENST00000585070 81 ntBASIC1.11□□□□□ -2.23
COL9A1P20849 RNU6-1238P-201ENST00000517215 102 ntBASIC1.1□□□□□ -2.23
COL9A1P20849 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
COL9A1P20849 RNA5SP98-201ENST00000363158 137 ntBASIC1.09□□□□□ -2.23
COL9A1P20849 Y_RNA.699-201ENST00000516803 93 ntBASIC1.09□□□□□ -2.23
COL9A1P20849 MIR6888-201ENST00000621977 67 ntBASIC1.09□□□□□ -2.23
COL9A1P20849 RNA5SP193-201ENST00000410353 107 ntBASIC1.08□□□□□ -2.24
COL9A1P20849 MIR4464-201ENST00000580818 92 ntBASIC1.08□□□□□ -2.24
COL9A1P20849 SNORA17.4-201ENST00000391287 132 ntBASIC1.07□□□□□ -2.24
COL9A1P20849 Y_RNA.613-201ENST00000410726 97 ntBASIC1.07□□□□□ -2.24
COL9A1P20849 SCARNA11.2-201ENST00000517183 154 ntBASIC1.07□□□□□ -2.24
COL9A1P20849 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
COL9A1P20849 AL445584.3-201ENST00000617173 78 ntBASIC1.07□□□□□ -2.24
COL9A1P20849 MIR202-201ENST00000362219 110 ntBASIC1.06□□□□□ -2.24
COL9A1P20849 MIR520D-201ENST00000385002 87 ntBASIC1.06□□□□□ -2.24
COL9A1P20849 MIR499B-201ENST00000636498 73 ntBASIC1.06□□□□□ -2.24
COL9A1P20849 MIR6759-201ENST00000638110 65 ntBASIC1.06□□□□□ -2.24
COL9A1P20849 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
COL9A1P20849 MIR4711-201ENST00000578274 70 ntBASIC1.05□□□□□ -2.24
COL9A1P20849 Y_RNA.134-201ENST00000363435 105 ntBASIC1.04□□□□□ -2.24
COL9A1P20849 RNU7-129P-201ENST00000516128 62 ntBASIC1.04□□□□□ -2.24
COL9A1P20849 MIR5589-201ENST00000579442 60 ntBASIC1.04□□□□□ -2.24
COL9A1P20849 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
COL9A1P20849 Y_RNA.382-201ENST00000365672 114 ntBASIC1.03□□□□□ -2.24
COL9A1P20849 RNU6-1133P-201ENST00000410963 100 ntBASIC1.03□□□□□ -2.24
COL9A1P20849 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms