Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP476-201ENST00000516613 103 ntBASIC0.58□□□□□ -2.32
NFKB1P19838 SNORA40.16-201ENST00000517238 121 ntBASIC0.58□□□□□ -2.32
NFKB1P19838 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
NFKB1P19838 Y_RNA.433-201ENST00000384089 102 ntBASIC0.56□□□□□ -2.32
NFKB1P19838 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
NFKB1P19838 RNU6-172P-201ENST00000411000 93 ntBASIC0.56□□□□□ -2.32
NFKB1P19838 snoR1.1-201ENST00000628177 80 ntBASIC0.56□□□□□ -2.32
NFKB1P19838 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
NFKB1P19838 MIR4432-201ENST00000581823 84 ntBASIC0.55□□□□□ -2.32
NFKB1P19838 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
NFKB1P19838 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
NFKB1P19838 RNU6-35P-201ENST00000384530 107 ntBASIC0.54□□□□□ -2.32
NFKB1P19838 SNORA40B-201ENST00000385573 128 ntBASIC0.54□□□□□ -2.32
NFKB1P19838 HAR1A.1-201ENST00000459583 118 ntBASIC0.54□□□□□ -2.32
NFKB1P19838 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
NFKB1P19838 MIR643-201ENST00000385267 97 ntBASIC0.53□□□□□ -2.32
NFKB1P19838 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.53□□□□□ -2.32
NFKB1P19838 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
NFKB1P19838 MIR6514-201ENST00000622549 70 ntBASIC0.53□□□□□ -2.32
NFKB1P19838 RNU7-55P-201ENST00000459426 62 ntBASIC0.52□□□□□ -2.33
NFKB1P19838 AC108676.2-201ENST00000605225 163 ntBASIC0.52□□□□□ -2.33
NFKB1P19838 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
NFKB1P19838 RNU6-810P-201ENST00000364001 107 ntBASIC0.51□□□□□ -2.33
NFKB1P19838 CR383656.4-201ENST00000546909 122 ntBASIC0.51□□□□□ -2.33
NFKB1P19838 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
NFKB1P19838 MIR548H2-201ENST00000408874 88 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 Y_RNA.698-201ENST00000516798 118 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 MIR4514-201ENST00000581410 57 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 MIR2909-201ENST00000617113 69 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 AL391099.1-201ENST00000624635 187 ntBASIC0.5□□□□□ -2.33
NFKB1P19838 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
NFKB1P19838 MIR148A-201ENST00000362215 68 ntBASIC0.49□□□□□ -2.33
NFKB1P19838 RNU6-1327P-201ENST00000365302 105 ntBASIC0.49□□□□□ -2.33
NFKB1P19838 Y_RNA.379-201ENST00000365653 102 ntBASIC0.49□□□□□ -2.33
NFKB1P19838 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
NFKB1P19838 RNU6-598P-201ENST00000364017 105 ntBASIC0.48□□□□□ -2.33
NFKB1P19838 RNU6-973P-201ENST00000364690 107 ntBASIC0.48□□□□□ -2.33
NFKB1P19838 RNU6-900P-201ENST00000384498 102 ntBASIC0.48□□□□□ -2.33
NFKB1P19838 RNU6-1133P-201ENST00000410963 100 ntBASIC0.48□□□□□ -2.33
NFKB1P19838 RNU6-980P-201ENST00000516925 103 ntBASIC0.48□□□□□ -2.33
NFKB1P19838 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
NFKB1P19838 SNORA62.4-201ENST00000365504 151 ntBASIC0.47□□□□□ -2.33
NFKB1P19838 RNU6-180P-201ENST00000516697 61 ntBASIC0.47□□□□□ -2.33
NFKB1P19838 MIR4464-201ENST00000580818 92 ntBASIC0.47□□□□□ -2.33
NFKB1P19838 MIR892B-201ENST00000401279 77 ntBASIC0.46□□□□□ -2.34
NFKB1P19838 RNA5SP163-201ENST00000410304 99 ntBASIC0.46□□□□□ -2.34
NFKB1P19838 uc_338.36-201ENST00000622331 158 ntBASIC0.46□□□□□ -2.34
NFKB1P19838 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
NFKB1P19838 AC096531.1-201ENST00000419107 107 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 MIR6888-201ENST00000621977 67 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 U2.18-201ENST00000622185 84 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 MIR6086-201ENST00000638065 55 ntBASIC0.45□□□□□ -2.34
NFKB1P19838 RNU6-455P-201ENST00000384681 107 ntBASIC0.44□□□□□ -2.34
NFKB1P19838 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.44□□□□□ -2.34
NFKB1P19838 MIR6507-201ENST00000613630 70 ntBASIC0.44□□□□□ -2.34
NFKB1P19838 MIR4315-1-201ENST00000636800 73 ntBASIC0.44□□□□□ -2.34
NFKB1P19838 MIR4315-2-201ENST00000640925 73 ntBASIC0.44□□□□□ -2.34
NFKB1P19838 MIR548X-201ENST00000580069 75 ntBASIC0.43□□□□□ -2.34
NFKB1P19838 MIR4490-201ENST00000582647 84 ntBASIC0.43□□□□□ -2.34
NFKB1P19838 AL445584.3-201ENST00000617173 78 ntBASIC0.43□□□□□ -2.34
NFKB1P19838 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
NFKB1P19838 RNU6-696P-201ENST00000390834 107 ntBASIC0.42□□□□□ -2.34
NFKB1P19838 MIR4743-201ENST00000584576 69 ntBASIC0.42□□□□□ -2.34
NFKB1P19838 RNU6-753P-201ENST00000363926 107 ntBASIC0.41□□□□□ -2.34
NFKB1P19838 RNU6-1262P-201ENST00000516217 96 ntBASIC0.41□□□□□ -2.34
NFKB1P19838 RNU7-160P-201ENST00000516660 62 ntBASIC0.41□□□□□ -2.34
NFKB1P19838 RNU4-33P-201ENST00000364316 85 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 MIR610-201ENST00000385139 96 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 MIR579-201ENST00000385221 98 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 RNU4-88P-201ENST00000411220 86 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 RNU7-151P-201ENST00000516930 53 ntBASIC0.4□□□□□ -2.35
NFKB1P19838 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
NFKB1P19838 MIR548AA1-201ENST00000384971 97 ntBASIC0.38□□□□□ -2.35
NFKB1P19838 RNA5SP285-201ENST00000516619 119 ntBASIC0.38□□□□□ -2.35
NFKB1P19838 U7.5-201ENST00000517224 61 ntBASIC0.38□□□□□ -2.35
NFKB1P19838 MIR4636-201ENST00000582271 80 ntBASIC0.38□□□□□ -2.35
NFKB1P19838 MIR593-201ENST00000384856 100 ntBASIC0.37□□□□□ -2.35
NFKB1P19838 MIR4802-201ENST00000581881 80 ntBASIC0.37□□□□□ -2.35
NFKB1P19838 SNORA42.1-201ENST00000363515 137 ntBASIC0.36□□□□□ -2.35
NFKB1P19838 AC104408.1-201ENST00000605241 170 ntBASIC0.36□□□□□ -2.35
NFKB1P19838 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 AC244250.2-201ENST00000418731 148 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 SNORD57-201ENST00000448188 72 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 RNU7-88P-201ENST00000458752 63 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 RNU7-165P-201ENST00000458864 60 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 RNU6-419P-201ENST00000517030 63 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 MIR5704-201ENST00000584029 77 ntBASIC0.35□□□□□ -2.35
NFKB1P19838 Y_RNA.69-201ENST00000362885 109 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 MIR145-201ENST00000384967 88 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 RNU6-995P-201ENST00000391244 107 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 RNU6-1206P-201ENST00000516339 103 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 RNU6-1174P-201ENST00000517278 101 ntBASIC0.34□□□□□ -2.36
NFKB1P19838 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
NFKB1P19838 RNU7-159P-201ENST00000459284 62 ntBASIC0.33□□□□□ -2.36
NFKB1P19838 Y_RNA.613-201ENST00000410726 97 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms