Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR548X-201ENST00000580069 75 ntBASIC0.8□□□□□ -2.28
CSB-PGBD3P0DP91 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
CSB-PGBD3P0DP91 U2.18-201ENST00000622185 84 ntBASIC0.79□□□□□ -2.28
CSB-PGBD3P0DP91 MIR429-201ENST00000362106 83 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR106A-201ENST00000384870 81 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR579-201ENST00000385221 98 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR5087-201ENST00000635826 76 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR103A1-201ENST00000362165 78 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 SNORA68.3-201ENST00000515906 83 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 RNU6-863P-201ENST00000515989 104 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 Y_RNA.698-201ENST00000516798 118 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
CSB-PGBD3P0DP91 MIR4432-201ENST00000581823 84 ntBASIC0.74□□□□□ -2.29
CSB-PGBD3P0DP91 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.74□□□□□ -2.29
CSB-PGBD3P0DP91 MIR330-201ENST00000362196 94 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 RNU7-151P-201ENST00000516930 53 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 AC108676.2-201ENST00000605225 163 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 RNU6-127P-201ENST00000390897 107 ntBASIC0.72□□□□□ -2.29
CSB-PGBD3P0DP91 MIR1197-201ENST00000408818 88 ntBASIC0.72□□□□□ -2.29
CSB-PGBD3P0DP91 MIRLET7D-201ENST00000362263 87 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 MIR4464-201ENST00000580818 92 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 uc_338.17-201ENST00000619633 179 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 RNA5SP98-201ENST00000363158 137 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-930P-201ENST00000390938 100 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 uc_338.36-201ENST00000622331 158 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-815P-201ENST00000384080 113 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-1262P-201ENST00000516217 96 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-419P-201ENST00000517030 63 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 MIR6888-201ENST00000621977 67 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-924P-201ENST00000362926 108 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 AC114737.2-201ENST00000421583 173 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 AC108740.1-201ENST00000498629 225 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CSB-PGBD3P0DP91 MIR548F3-201ENST00000408509 87 ntBASIC0.67□□□□□ -2.3
CSB-PGBD3P0DP91 Y_RNA.69-201ENST00000362885 109 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 RNA5SP257-201ENST00000363023 116 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 MIR643-201ENST00000385267 97 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 U7.5-201ENST00000517224 61 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 RNU7-88P-201ENST00000458752 63 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 RNU7-55P-201ENST00000459426 62 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 AL445584.3-201ENST00000617173 78 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 AL391099.1-201ENST00000624635 187 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-696P-201ENST00000390834 107 ntBASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1206P-201ENST00000516339 103 ntBASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1267P-201ENST00000410747 107 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 RNU7-160P-201ENST00000516660 62 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 MIR6514-201ENST00000622549 70 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 VTRNA1-3-201ENST00000365645 89 ntBASIC0.62□□□□□ -2.31
CSB-PGBD3P0DP91 MIR548H2-201ENST00000408874 88 ntBASIC0.62□□□□□ -2.31
CSB-PGBD3P0DP91 Y_RNA.68-201ENST00000362881 102 ntBASIC0.61□□□□□ -2.31
CSB-PGBD3P0DP91 MIR548AA1-201ENST00000384971 97 ntBASIC0.61□□□□□ -2.31
CSB-PGBD3P0DP91 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-973P-201ENST00000364690 107 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1133P-201ENST00000410963 100 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1174P-201ENST00000517278 101 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 AC090625.1-201ENST00000357130 210 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 Y_RNA.178-201ENST00000363832 102 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 MIR125B1-201ENST00000385236 88 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 MIR4514-201ENST00000581410 57 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-838P-201ENST00000363399 108 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 AC096531.1-201ENST00000419107 107 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 AC069113.3-201ENST00000521019 150 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 MIR5704-201ENST00000584029 77 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 MIR6507-201ENST00000613630 70 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-900P-201ENST00000384498 102 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-455P-201ENST00000384681 107 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR329-2-201ENST00000385029 84 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-995P-201ENST00000391244 107 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNA5SP163-201ENST00000410304 99 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR2909-201ENST00000617113 69 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR8068-201ENST00000618032 68 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CSB-PGBD3P0DP91 SNORA62.4-201ENST00000365504 151 ntBASIC0.56□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-1327P-201ENST00000365302 105 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-974P-201ENST00000384099 108 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 MIR545-201ENST00000385085 106 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-180P-201ENST00000516697 61 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 CR383656.4-201ENST00000546909 122 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 Y_RNA.139-201ENST00000363464 102 ntBASIC0.53□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-828P-201ENST00000364876 107 ntBASIC0.53□□□□□ -2.32
CSB-PGBD3P0DP91 SNORD63.1-201ENST00000516178 80 ntBASIC0.52□□□□□ -2.33
CSB-PGBD3P0DP91 RNU6-247P-201ENST00000362636 107 ntBASIC0.51□□□□□ -2.33
CSB-PGBD3P0DP91 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
CSB-PGBD3P0DP91 AL451105.1-201ENST00000450005 189 ntBASIC0.5□□□□□ -2.33
CSB-PGBD3P0DP91 MTRNR2L9-201ENST00000622562 75 ntBASIC0.5□□□□□ -2.33
CSB-PGBD3P0DP91 MIR148A-201ENST00000362215 68 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 SNORD56B-201ENST00000384713 71 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 Y_RNA.613-201ENST00000410726 97 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 MIR593-201ENST00000384856 100 ntBASIC0.47□□□□□ -2.33
CSB-PGBD3P0DP91 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.47□□□□□ -2.33
CSB-PGBD3P0DP91 AC244250.2-201ENST00000418731 148 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 RNA5SP134-201ENST00000516492 96 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 MIR3170-201ENST00000582699 77 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms