Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 MIR198-201ENST00000637333 62 ntBASIC-0.96□□□□□ -2.56
PGK1P00558 RNU6-330P-201ENST00000363015 107 ntBASIC-0.97□□□□□ -2.56
PGK1P00558 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
PGK1P00558 RNU6-844P-201ENST00000517175 102 ntBASIC-0.98□□□□□ -2.57
PGK1P00558 SNORA8.1-201ENST00000384250 140 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 RNU6-303P-201ENST00000517091 106 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 RNU6-789P-201ENST00000517105 102 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 uc_338.19-201ENST00000616808 99 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 U2.7-201ENST00000619197 100 ntBASIC-0.99□□□□□ -2.57
PGK1P00558 AL021921.1-201ENST00000442774 93 ntBASIC-1□□□□□ -2.57
PGK1P00558 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 SNORD115-22-201ENST00000364456 82 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 RNU6-645P-201ENST00000364649 106 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 RNU6-44P-201ENST00000384045 107 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 RNU4-61P-201ENST00000411243 107 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 AC074348.1-201ENST00000426503 132 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 SCARNA18B-201ENST00000458806 135 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 SNORD63.1-201ENST00000516178 80 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 AC006160.2-201ENST00000637708 154 ntBASIC-1.01□□□□□ -2.57
PGK1P00558 RNU6-686P-201ENST00000364839 107 ntBASIC-1.02□□□□□ -2.57
PGK1P00558 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.02□□□□□ -2.57
PGK1P00558 RNU6-604P-201ENST00000390917 100 ntBASIC-1.03□□□□□ -2.57
PGK1P00558 RNU6-129P-201ENST00000391022 107 ntBASIC-1.03□□□□□ -2.57
PGK1P00558 RNU7-134P-201ENST00000458997 64 ntBASIC-1.03□□□□□ -2.57
PGK1P00558 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.03□□□□□ -2.57
PGK1P00558 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.04□□□□□ -2.58
PGK1P00558 RNU6-924P-201ENST00000362926 108 ntBASIC-1.04□□□□□ -2.58
PGK1P00558 RNU6-49P-201ENST00000384256 107 ntBASIC-1.04□□□□□ -2.58
PGK1P00558 MIR378F-201ENST00000578143 78 ntBASIC-1.04□□□□□ -2.58
PGK1P00558 RNU6-246P-201ENST00000384702 107 ntBASIC-1.05□□□□□ -2.58
PGK1P00558 RNU6-807P-201ENST00000516805 107 ntBASIC-1.05□□□□□ -2.58
PGK1P00558 MIR3675-201ENST00000583661 73 ntBASIC-1.05□□□□□ -2.58
PGK1P00558 U4.2-201ENST00000618561 85 ntBASIC-1.05□□□□□ -2.58
PGK1P00558 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.06□□□□□ -2.58
PGK1P00558 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.06□□□□□ -2.58
PGK1P00558 RNU6-168P-201ENST00000516189 101 ntBASIC-1.06□□□□□ -2.58
PGK1P00558 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.06□□□□□ -2.58
PGK1P00558 AP002795.1-201ENST00000534879 84 ntBASIC-1.06□□□□□ -2.58
PGK1P00558 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.07□□□□□ -2.58
PGK1P00558 SNORA26.4-201ENST00000391188 123 ntBASIC-1.07□□□□□ -2.58
PGK1P00558 RNA5SP89-201ENST00000410300 108 ntBASIC-1.07□□□□□ -2.58
PGK1P00558 RNU7-88P-201ENST00000458752 63 ntBASIC-1.07□□□□□ -2.58
PGK1P00558 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 RNU6-982P-201ENST00000516216 102 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 snoU83B.1-201ENST00000517136 88 ntBASIC-1.08□□□□□ -2.58
PGK1P00558 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.09□□□□□ -2.58
PGK1P00558 MIR4484-201ENST00000582855 83 ntBASIC-1.09□□□□□ -2.58
PGK1P00558 U2.22-201ENST00000636441 106 ntBASIC-1.09□□□□□ -2.58
PGK1P00558 RNA5SP192-201ENST00000364404 120 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 RNU7-174P-201ENST00000516248 59 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 U7.5-201ENST00000517224 61 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.1□□□□□ -2.59
PGK1P00558 SNORD19-201ENST00000391191 68 ntBASIC-1.11□□□□□ -2.59
PGK1P00558 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.11□□□□□ -2.59
PGK1P00558 RNA5SP461-201ENST00000516451 104 ntBASIC-1.11□□□□□ -2.59
PGK1P00558 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.11□□□□□ -2.59
PGK1P00558 SNORD115-33-201ENST00000363723 82 ntBASIC-1.12□□□□□ -2.59
PGK1P00558 RNU6-732P-201ENST00000516033 103 ntBASIC-1.12□□□□□ -2.59
PGK1P00558 MIR5588-201ENST00000581890 63 ntBASIC-1.12□□□□□ -2.59
PGK1P00558 SNORD45.1-201ENST00000363181 77 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 RNU6-979P-201ENST00000383896 107 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 RNU6-24P-201ENST00000384440 107 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 MIR548C-201ENST00000384815 97 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 MIR548AI-201ENST00000579940 88 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 MIR1297-201ENST00000637311 77 ntBASIC-1.13□□□□□ -2.59
PGK1P00558 RNA5SP26-201ENST00000362406 119 ntBASIC-1.14□□□□□ -2.59
PGK1P00558 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.14□□□□□ -2.59
PGK1P00558 MIR3115-201ENST00000577915 68 ntBASIC-1.14□□□□□ -2.59
PGK1P00558 MIR3165-201ENST00000579874 75 ntBASIC-1.14□□□□□ -2.59
PGK1P00558 RNU6-315P-201ENST00000362666 107 ntBASIC-1.15□□□□□ -2.59
PGK1P00558 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.15□□□□□ -2.59
PGK1P00558 MIR6818-201ENST00000621576 65 ntBASIC-1.15□□□□□ -2.59
PGK1P00558 RNU6-153P-201ENST00000364422 104 ntBASIC-1.16□□□□□ -2.6
PGK1P00558 RNY1P1-201ENST00000364372 112 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 SNORD114-3-201ENST00000364969 75 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 MIR1207-201ENST00000408249 87 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 U4.4-201ENST00000620626 117 ntBASIC-1.17□□□□□ -2.6
PGK1P00558 MIR507-201ENST00000385234 94 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 RPL35AP4-201ENST00000412007 102 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 AL353691.2-201ENST00000443795 59 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 IGLL4P-201ENST00000614590 133 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 MIR664A-201ENST00000626086 82 ntBASIC-1.18□□□□□ -2.6
PGK1P00558 MIR365A-201ENST00000362260 87 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 RNU6-458P-201ENST00000384179 107 ntBASIC-1.19□□□□□ -2.6
PGK1P00558 MIR29B1-201ENST00000385015 81 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms