Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL391099.1-201ENST00000624635 187 ntBASIC0.25□□□□□ -2.37
SHISA3A0PJX4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SHISA3A0PJX4 RNA5SP214-201ENST00000363378 118 ntBASIC0.24□□□□□ -2.37
SHISA3A0PJX4 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
SHISA3A0PJX4 RNU6-1133P-201ENST00000410963 100 ntBASIC0.24□□□□□ -2.37
SHISA3A0PJX4 RNU7-159P-201ENST00000459284 62 ntBASIC0.24□□□□□ -2.37
SHISA3A0PJX4 MIR6507-201ENST00000613630 70 ntBASIC0.24□□□□□ -2.37
SHISA3A0PJX4 SNORA62.4-201ENST00000365504 151 ntBASIC0.23□□□□□ -2.37
SHISA3A0PJX4 RNU6-455P-201ENST00000384681 107 ntBASIC0.23□□□□□ -2.37
SHISA3A0PJX4 MIR145-201ENST00000384967 88 ntBASIC0.23□□□□□ -2.37
SHISA3A0PJX4 MIR8087-201ENST00000612745 78 ntBASIC0.23□□□□□ -2.37
SHISA3A0PJX4 MIR330-201ENST00000362196 94 ntBASIC0.22□□□□□ -2.37
SHISA3A0PJX4 RNU6-246P-201ENST00000384702 107 ntBASIC0.22□□□□□ -2.37
SHISA3A0PJX4 SNORD114-9-201ENST00000364370 72 ntBASIC0.21□□□□□ -2.38
SHISA3A0PJX4 RNU6-520P-201ENST00000384717 104 ntBASIC0.21□□□□□ -2.38
SHISA3A0PJX4 AC096531.1-201ENST00000419107 107 ntBASIC0.21□□□□□ -2.38
SHISA3A0PJX4 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SHISA3A0PJX4 RNU6-829P-201ENST00000363700 112 ntBASIC0.2□□□□□ -2.38
SHISA3A0PJX4 RNU7-119P-201ENST00000459279 63 ntBASIC0.2□□□□□ -2.38
SHISA3A0PJX4 MIR548AG1-201ENST00000579932 66 ntBASIC0.2□□□□□ -2.38
SHISA3A0PJX4 RNA5SP457-201ENST00000363657 124 ntBASIC0.19□□□□□ -2.38
SHISA3A0PJX4 MTND4LP19-201ENST00000403051 166 ntBASIC0.19□□□□□ -2.38
SHISA3A0PJX4 RNU6-458P-201ENST00000384179 107 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 RNU6-1184P-201ENST00000384588 108 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 AC108676.2-201ENST00000605225 163 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 U6.58-201ENST00000613107 107 ntBASIC0.18□□□□□ -2.38
SHISA3A0PJX4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.17□□□□□ -2.38
SHISA3A0PJX4 RNU6-46P-201ENST00000383860 107 ntBASIC0.17□□□□□ -2.38
SHISA3A0PJX4 RNA5SP330-201ENST00000517096 96 ntBASIC0.17□□□□□ -2.38
SHISA3A0PJX4 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
SHISA3A0PJX4 Y_RNA.236-201ENST00000364427 111 ntBASIC0.16□□□□□ -2.38
SHISA3A0PJX4 AC244250.2-201ENST00000418731 148 ntBASIC0.16□□□□□ -2.38
SHISA3A0PJX4 RNU6-231P-201ENST00000517122 103 ntBASIC0.16□□□□□ -2.38
SHISA3A0PJX4 uc_338.36-201ENST00000622331 158 ntBASIC0.16□□□□□ -2.38
SHISA3A0PJX4 RNU6-446P-201ENST00000362827 106 ntBASIC0.15□□□□□ -2.39
SHISA3A0PJX4 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
SHISA3A0PJX4 Y_RNA.109-201ENST00000363215 102 ntBASIC0.15□□□□□ -2.39
SHISA3A0PJX4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SHISA3A0PJX4 AC104692.1-201ENST00000472406 90 ntBASIC0.15□□□□□ -2.39
SHISA3A0PJX4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.14□□□□□ -2.39
SHISA3A0PJX4 RNU6-614P-201ENST00000384369 107 ntBASIC0.13□□□□□ -2.39
SHISA3A0PJX4 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
SHISA3A0PJX4 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
SHISA3A0PJX4 MIR4464-201ENST00000580818 92 ntBASIC0.13□□□□□ -2.39
SHISA3A0PJX4 U6.59-201ENST00000615686 107 ntBASIC0.13□□□□□ -2.39
SHISA3A0PJX4 RNU6-901P-201ENST00000384593 106 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 Y_RNA.698-201ENST00000516798 118 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 MIR7110-201ENST00000612638 86 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 AL445584.3-201ENST00000617173 78 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 MIR6888-201ENST00000621977 67 ntBASIC0.12□□□□□ -2.39
SHISA3A0PJX4 MIR655-201ENST00000362159 97 ntBASIC0.11□□□□□ -2.39
SHISA3A0PJX4 SNORD1B-201ENST00000363091 84 ntBASIC0.11□□□□□ -2.39
SHISA3A0PJX4 MIR6854-201ENST00000614935 69 ntBASIC0.1□□□□□ -2.39
SHISA3A0PJX4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
SHISA3A0PJX4 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
SHISA3A0PJX4 SNORD49B-201ENST00000365172 72 ntBASIC0.08□□□□□ -2.4
SHISA3A0PJX4 RNU6-929P-201ENST00000384429 107 ntBASIC0.08□□□□□ -2.4
SHISA3A0PJX4 SNORD56B-201ENST00000384713 71 ntBASIC0.08□□□□□ -2.4
SHISA3A0PJX4 RNU6-172P-201ENST00000411000 93 ntBASIC0.07□□□□□ -2.4
SHISA3A0PJX4 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
SHISA3A0PJX4 RNU6-924P-201ENST00000362926 108 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 RNU6-987P-201ENST00000384759 104 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 SNORD116.2-201ENST00000391251 93 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 MIR5704-201ENST00000584029 77 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 MIR1295B-201ENST00000636144 60 ntBASIC0.06□□□□□ -2.4
SHISA3A0PJX4 RNA5SP257-201ENST00000363023 116 ntBASIC0.05□□□□□ -2.4
SHISA3A0PJX4 RNU6-696P-201ENST00000390834 107 ntBASIC0.05□□□□□ -2.4
SHISA3A0PJX4 RNU6-598P-201ENST00000364017 105 ntBASIC0.04□□□□□ -2.4
SHISA3A0PJX4 RNU4-37P-201ENST00000410214 84 ntBASIC0.04□□□□□ -2.4
SHISA3A0PJX4 Y_RNA.613-201ENST00000410726 97 ntBASIC0.04□□□□□ -2.4
SHISA3A0PJX4 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
SHISA3A0PJX4 SNORA40B-201ENST00000385573 128 ntBASIC0.02□□□□□ -2.41
SHISA3A0PJX4 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
SHISA3A0PJX4 MIR4263-201ENST00000584745 83 ntBASIC0.02□□□□□ -2.41
SHISA3A0PJX4 MIR2909-201ENST00000617113 69 ntBASIC0.02□□□□□ -2.41
SHISA3A0PJX4 SNORA18.1-201ENST00000363418 128 ntBASIC0.01□□□□□ -2.41
SHISA3A0PJX4 SNORD113-4-201ENST00000364802 75 ntBASIC0.01□□□□□ -2.41
SHISA3A0PJX4 RNU6-1262P-201ENST00000516217 96 ntBASIC0.01□□□□□ -2.41
SHISA3A0PJX4 U7.5-201ENST00000517224 61 ntBASIC0.01□□□□□ -2.41
SHISA3A0PJX4 SNORA40.16-201ENST00000517238 121 ntBASIC0.01□□□□□ -2.41
SHISA3A0PJX4 Y_RNA.30-201ENST00000362572 97 ntBASIC0□□□□□ -2.41
SHISA3A0PJX4 AC114755.3-201ENST00000481111 251 ntBASIC0□□□□□ -2.41
SHISA3A0PJX4 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
SHISA3A0PJX4 MIR4280-201ENST00000582178 76 ntBASIC0□□□□□ -2.41
SHISA3A0PJX4 MIR8068-201ENST00000618032 68 ntBASIC0□□□□□ -2.41
SHISA3A0PJX4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 AL445193.1-201ENST00000441183 141 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 RNU7-160P-201ENST00000516660 62 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 MIR6851-201ENST00000617060 67 ntBASIC-0.01□□□□□ -2.41
SHISA3A0PJX4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
SHISA3A0PJX4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.02□□□□□ -2.41
SHISA3A0PJX4 U2.18-201ENST00000622185 84 ntBASIC-0.02□□□□□ -2.41
SHISA3A0PJX4 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.03□□□□□ -2.41
SHISA3A0PJX4 RNU6-810P-201ENST00000364001 107 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms