Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 MIR548AD-201ENST00000584780 82 ntBASIC0.8□□□□□ -2.28
GPC6Q9Y625 RN7SL660P-201ENST00000614852 299 ntBASIC0.8□□□□□ -2.28
GPC6Q9Y625 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
GPC6Q9Y625 MIR373-201ENST00000362273 69 ntBASIC0.79□□□□□ -2.28
GPC6Q9Y625 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
GPC6Q9Y625 RNU6-337P-201ENST00000391243 106 ntBASIC0.79□□□□□ -2.28
GPC6Q9Y625 RNU6-141P-201ENST00000410499 105 ntBASIC0.79□□□□□ -2.28
GPC6Q9Y625 RNA5SP480-201ENST00000516840 109 ntBASIC0.79□□□□□ -2.28
GPC6Q9Y625 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
GPC6Q9Y625 RNU6-782P-201ENST00000516852 104 ntBASIC0.78□□□□□ -2.28
GPC6Q9Y625 AP000676.1-201ENST00000533307 52 ntBASIC0.78□□□□□ -2.28
GPC6Q9Y625 SNORD115-25-201ENST00000362619 82 ntBASIC0.76□□□□□ -2.29
GPC6Q9Y625 RNA5SP436-201ENST00000516020 115 ntBASIC0.76□□□□□ -2.29
GPC6Q9Y625 SCARNA11.2-201ENST00000517183 154 ntBASIC0.76□□□□□ -2.29
GPC6Q9Y625 MIR3925-201ENST00000584674 77 ntBASIC0.76□□□□□ -2.29
GPC6Q9Y625 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
GPC6Q9Y625 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
GPC6Q9Y625 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
GPC6Q9Y625 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
GPC6Q9Y625 MIR103A1-201ENST00000362165 78 ntBASIC0.74□□□□□ -2.29
GPC6Q9Y625 RNU6-1312P-201ENST00000362425 108 ntBASIC0.74□□□□□ -2.29
GPC6Q9Y625 SNORD44.1-201ENST00000363202 61 ntBASIC0.74□□□□□ -2.29
GPC6Q9Y625 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
GPC6Q9Y625 Y_RNA.74-201ENST00000362911 99 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 MIRLET7B-201ENST00000385140 83 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 RNU6-848P-201ENST00000515948 107 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 RNU6-617P-201ENST00000516147 107 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 RNU6-473P-201ENST00000516164 107 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 RNU6-1049P-201ENST00000516414 107 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
GPC6Q9Y625 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
GPC6Q9Y625 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
GPC6Q9Y625 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.72□□□□□ -2.29
GPC6Q9Y625 RNU6-502P-201ENST00000362419 108 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 SNORD114-26-201ENST00000363543 72 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 SNORD113-4-201ENST00000364802 75 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 MIR7978-201ENST00000636158 59 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
GPC6Q9Y625 Y_RNA.282-201ENST00000364793 102 ntBASIC0.7□□□□□ -2.3
GPC6Q9Y625 SNORD116.2-201ENST00000391251 93 ntBASIC0.7□□□□□ -2.3
GPC6Q9Y625 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.7□□□□□ -2.3
GPC6Q9Y625 MIR548AG1-201ENST00000579932 66 ntBASIC0.7□□□□□ -2.3
GPC6Q9Y625 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
GPC6Q9Y625 SNORD116-16-201ENST00000384533 92 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 MIR643-201ENST00000385267 97 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
GPC6Q9Y625 RNU6-863P-201ENST00000515989 104 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 RNU7-154P-201ENST00000516194 62 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 RNA5SP470-201ENST00000516463 106 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 RNA5SP121-201ENST00000516537 101 ntBASIC0.69□□□□□ -2.3
GPC6Q9Y625 RNU6-936P-201ENST00000384005 107 ntBASIC0.68□□□□□ -2.3
GPC6Q9Y625 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
GPC6Q9Y625 RNU6-231P-201ENST00000517122 103 ntBASIC0.68□□□□□ -2.3
GPC6Q9Y625 MIR876-201ENST00000401147 81 ntBASIC0.67□□□□□ -2.3
GPC6Q9Y625 Y_RNA.722-201ENST00000517279 114 ntBASIC0.67□□□□□ -2.3
GPC6Q9Y625 snoR1.1-201ENST00000628177 80 ntBASIC0.67□□□□□ -2.3
GPC6Q9Y625 RNU7-119P-201ENST00000459279 63 ntBASIC0.66□□□□□ -2.3
GPC6Q9Y625 uc_338.36-201ENST00000622331 158 ntBASIC0.66□□□□□ -2.3
GPC6Q9Y625 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 RNU6-815P-201ENST00000384080 113 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 RNU6-520P-201ENST00000384717 104 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 MIR106A-201ENST00000384870 81 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 RNU6-127P-201ENST00000390897 107 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 AL353803.5-201ENST00000599815 141 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
GPC6Q9Y625 MIR429-201ENST00000362106 83 ntBASIC0.64□□□□□ -2.31
GPC6Q9Y625 AC108740.1-201ENST00000498629 225 ntBASIC0.64□□□□□ -2.31
GPC6Q9Y625 MIRLET7D-201ENST00000362263 87 ntBASIC0.63□□□□□ -2.31
GPC6Q9Y625 Y_RNA.109-201ENST00000363215 102 ntBASIC0.63□□□□□ -2.31
GPC6Q9Y625 RNA5SP325-201ENST00000363756 130 ntBASIC0.63□□□□□ -2.31
GPC6Q9Y625 RNU6-246P-201ENST00000384702 107 ntBASIC0.63□□□□□ -2.31
GPC6Q9Y625 RNA5SP98-201ENST00000363158 137 ntBASIC0.62□□□□□ -2.31
GPC6Q9Y625 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.62□□□□□ -2.31
GPC6Q9Y625 RNU6-458P-201ENST00000384179 107 ntBASIC0.61□□□□□ -2.31
GPC6Q9Y625 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
GPC6Q9Y625 U6.58-201ENST00000613107 107 ntBASIC0.61□□□□□ -2.31
GPC6Q9Y625 MIR6514-201ENST00000622549 70 ntBASIC0.61□□□□□ -2.31
GPC6Q9Y625 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
GPC6Q9Y625 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
GPC6Q9Y625 MIR7110-201ENST00000612638 86 ntBASIC0.6□□□□□ -2.31
GPC6Q9Y625 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
GPC6Q9Y625 RNU6-172P-201ENST00000411000 93 ntBASIC0.59□□□□□ -2.31
GPC6Q9Y625 MIR4432-201ENST00000581823 84 ntBASIC0.59□□□□□ -2.31
GPC6Q9Y625 SNORD1B-201ENST00000363091 84 ntBASIC0.58□□□□□ -2.32
GPC6Q9Y625 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
GPC6Q9Y625 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
GPC6Q9Y625 RNU6-808P-201ENST00000391233 108 ntBASIC0.57□□□□□ -2.32
GPC6Q9Y625 RNU6-1133P-201ENST00000410963 100 ntBASIC0.57□□□□□ -2.32
GPC6Q9Y625 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
GPC6Q9Y625 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
GPC6Q9Y625 RNA5SP163-201ENST00000410304 99 ntBASIC0.56□□□□□ -2.32
GPC6Q9Y625 RNU6-810P-201ENST00000364001 107 ntBASIC0.54□□□□□ -2.32
GPC6Q9Y625 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
GPC6Q9Y625 AC108676.2-201ENST00000605225 163 ntBASIC0.54□□□□□ -2.32
GPC6Q9Y625 SNORD115-23-201ENST00000364461 82 ntBASIC0.53□□□□□ -2.32
GPC6Q9Y625 RNU6-1184P-201ENST00000384588 108 ntBASIC0.53□□□□□ -2.32
GPC6Q9Y625 AC069113.3-201ENST00000521019 150 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms