Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.34□□□□□ -2.36
DNMT3BQ9UBC3 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
DNMT3BQ9UBC3 MIR548V-201ENST00000584165 80 ntBASIC0.34□□□□□ -2.36
DNMT3BQ9UBC3 AC084368.1-201ENST00000620935 65 ntBASIC0.34□□□□□ -2.36
DNMT3BQ9UBC3 MIR521-2-201ENST00000384818 87 ntBASIC0.33□□□□□ -2.36
DNMT3BQ9UBC3 MIR9-2-201ENST00000384838 87 ntBASIC0.33□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
DNMT3BQ9UBC3 MIR1265-201ENST00000408444 86 ntBASIC0.33□□□□□ -2.36
DNMT3BQ9UBC3 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
DNMT3BQ9UBC3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.32□□□□□ -2.36
DNMT3BQ9UBC3 MTND4LP1-201ENST00000446263 157 ntBASIC0.32□□□□□ -2.36
DNMT3BQ9UBC3 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
DNMT3BQ9UBC3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.32□□□□□ -2.36
DNMT3BQ9UBC3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 MIR20A-201ENST00000362279 71 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 SNORD114-29-201ENST00000364819 70 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 U6.96-201ENST00000636425 70 ntBASIC0.31□□□□□ -2.36
DNMT3BQ9UBC3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 MIR630-201ENST00000384957 97 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 RNA5SP63-201ENST00000391225 112 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-337P-201ENST00000391243 106 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 AC244090.1-201ENST00000441884 93 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 U2.7-201ENST00000619197 100 ntBASIC0.3□□□□□ -2.36
DNMT3BQ9UBC3 SNORA25.4-201ENST00000363666 124 ntBASIC0.29□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-788P-201ENST00000390967 104 ntBASIC0.29□□□□□ -2.36
DNMT3BQ9UBC3 RNA5SP299-201ENST00000391203 116 ntBASIC0.29□□□□□ -2.36
DNMT3BQ9UBC3 CYP3A54P-201ENST00000566950 75 ntBASIC0.29□□□□□ -2.36
DNMT3BQ9UBC3 SNORA75.1-201ENST00000391130 148 ntBASIC0.28□□□□□ -2.36
DNMT3BQ9UBC3 MIR548H2-201ENST00000408874 88 ntBASIC0.28□□□□□ -2.36
DNMT3BQ9UBC3 AP000676.1-201ENST00000533307 52 ntBASIC0.28□□□□□ -2.36
DNMT3BQ9UBC3 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
DNMT3BQ9UBC3 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
DNMT3BQ9UBC3 RNU6-590P-201ENST00000365039 107 ntBASIC0.27□□□□□ -2.37
DNMT3BQ9UBC3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
DNMT3BQ9UBC3 MIR1255B2-201ENST00000408618 67 ntBASIC0.27□□□□□ -2.37
DNMT3BQ9UBC3 MIR548AG1-201ENST00000579932 66 ntBASIC0.27□□□□□ -2.37
DNMT3BQ9UBC3 MIR6773-201ENST00000612812 74 ntBASIC0.27□□□□□ -2.37
DNMT3BQ9UBC3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 MIR876-201ENST00000401147 81 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 U4.4-201ENST00000620626 117 ntBASIC0.26□□□□□ -2.37
DNMT3BQ9UBC3 AC125388.1-201ENST00000459631 156 ntBASIC0.25□□□□□ -2.37
DNMT3BQ9UBC3 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
DNMT3BQ9UBC3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.25□□□□□ -2.37
DNMT3BQ9UBC3 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
DNMT3BQ9UBC3 RNU6-502P-201ENST00000362419 108 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 RNU6-518P-201ENST00000516056 96 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 RNU7-174P-201ENST00000516248 59 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 MIR4511-201ENST00000582784 87 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 uc_338.36-201ENST00000622331 158 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
DNMT3BQ9UBC3 SNORD115-25-201ENST00000362619 82 ntBASIC0.23□□□□□ -2.37
DNMT3BQ9UBC3 Y_RNA.325-201ENST00000365171 122 ntBASIC0.23□□□□□ -2.37
DNMT3BQ9UBC3 MIR519A2-201ENST00000384990 87 ntBASIC0.23□□□□□ -2.37
DNMT3BQ9UBC3 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
DNMT3BQ9UBC3 RNA5SP192-201ENST00000364404 120 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 RNU6-471P-201ENST00000383944 106 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 MIRLET7B-201ENST00000385140 83 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
DNMT3BQ9UBC3 SNORD114-5-201ENST00000362928 70 ntBASIC0.21□□□□□ -2.38
DNMT3BQ9UBC3 MIR517B-201ENST00000385102 67 ntBASIC0.21□□□□□ -2.38
DNMT3BQ9UBC3 SCARNA21.1-201ENST00000515996 128 ntBASIC0.21□□□□□ -2.38
DNMT3BQ9UBC3 RNU6-542P-201ENST00000516405 103 ntBASIC0.21□□□□□ -2.38
DNMT3BQ9UBC3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.2□□□□□ -2.38
DNMT3BQ9UBC3 RNA5SP215-201ENST00000363440 122 ntBASIC0.19□□□□□ -2.38
DNMT3BQ9UBC3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
DNMT3BQ9UBC3 SNORD113-2-201ENST00000391082 72 ntBASIC0.19□□□□□ -2.38
DNMT3BQ9UBC3 RNU6-698P-201ENST00000363523 107 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 Y_RNA.246-201ENST00000364495 108 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 RNU6-34P-201ENST00000364874 107 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 SNORA41B-201ENST00000384785 128 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 MIR892B-201ENST00000401279 77 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 MIR6507-201ENST00000613630 70 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 AC103706.3-201ENST00000636297 85 ntBASIC0.18□□□□□ -2.38
DNMT3BQ9UBC3 RNA5SP98-201ENST00000363158 137 ntBASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 SNORA25.5-201ENST00000363782 126 ntBASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 AC110620.1-201ENST00000416042 228 ntBASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.17□□□□□ -2.38
DNMT3BQ9UBC3 MIR633-201ENST00000384821 98 ntBASIC0.16□□□□□ -2.38
DNMT3BQ9UBC3 SNORD60.1-201ENST00000362451 73 ntBASIC0.15□□□□□ -2.39
DNMT3BQ9UBC3 RNU6-929P-201ENST00000384429 107 ntBASIC0.15□□□□□ -2.39
DNMT3BQ9UBC3 RNU6-455P-201ENST00000384681 107 ntBASIC0.15□□□□□ -2.39
DNMT3BQ9UBC3 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
DNMT3BQ9UBC3 AL021921.1-201ENST00000442774 93 ntBASIC0.15□□□□□ -2.39
DNMT3BQ9UBC3 MIR5704-201ENST00000584029 77 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms