Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CLDND1Q9NY35 RNU6-645P-201ENST00000364649 106 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 SNORA15B-2-201ENST00000384058 135 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 SNORA15B-1-201ENST00000384334 135 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 RNU6-540P-201ENST00000384622 101 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 MIR521-2-201ENST00000384818 87 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 MIR6759-201ENST00000638110 65 ntBASIC0.37□□□□□ -2.35
CLDND1Q9NY35 RNU6-895P-201ENST00000384125 103 ntBASIC0.36□□□□□ -2.35
CLDND1Q9NY35 RNU6-1162P-201ENST00000384443 104 ntBASIC0.36□□□□□ -2.35
CLDND1Q9NY35 SNORD2-201ENST00000459163 69 ntBASIC0.36□□□□□ -2.35
CLDND1Q9NY35 RNU6-656P-201ENST00000516785 107 ntBASIC0.36□□□□□ -2.35
CLDND1Q9NY35 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
CLDND1Q9NY35 MIR4636-201ENST00000582271 80 ntBASIC0.35□□□□□ -2.35
CLDND1Q9NY35 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
CLDND1Q9NY35 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
CLDND1Q9NY35 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
CLDND1Q9NY35 RNU6-1216P-201ENST00000362590 107 ntBASIC0.33□□□□□ -2.36
CLDND1Q9NY35 SNORA33.1-201ENST00000364957 130 ntBASIC0.33□□□□□ -2.36
CLDND1Q9NY35 RNU6-1036P-201ENST00000383959 104 ntBASIC0.33□□□□□ -2.36
CLDND1Q9NY35 MTND4LP1-201ENST00000446263 157 ntBASIC0.32□□□□□ -2.36
CLDND1Q9NY35 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CLDND1Q9NY35 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
CLDND1Q9NY35 SNORD116-24-201ENST00000384549 92 ntBASIC0.31□□□□□ -2.36
CLDND1Q9NY35 MIR106A-201ENST00000384870 81 ntBASIC0.31□□□□□ -2.36
CLDND1Q9NY35 RNU6-663P-201ENST00000391105 106 ntBASIC0.31□□□□□ -2.36
CLDND1Q9NY35 RNA5SP299-201ENST00000391203 116 ntBASIC0.31□□□□□ -2.36
CLDND1Q9NY35 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
CLDND1Q9NY35 SNORD30.1-201ENST00000391309 70 ntBASIC0.3□□□□□ -2.36
CLDND1Q9NY35 AC114801.3-201ENST00000510231 177 ntBASIC0.3□□□□□ -2.36
CLDND1Q9NY35 RNU6-649P-201ENST00000384463 107 ntBASIC0.29□□□□□ -2.36
CLDND1Q9NY35 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.29□□□□□ -2.36
CLDND1Q9NY35 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
CLDND1Q9NY35 U6.96-201ENST00000636425 70 ntBASIC0.29□□□□□ -2.36
CLDND1Q9NY35 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
CLDND1Q9NY35 MIR5589-201ENST00000579442 60 ntBASIC0.28□□□□□ -2.36
CLDND1Q9NY35 RNU6-668P-201ENST00000364180 107 ntBASIC0.27□□□□□ -2.37
CLDND1Q9NY35 SNORA42.1-201ENST00000363515 137 ntBASIC0.26□□□□□ -2.37
CLDND1Q9NY35 RNU6-539P-201ENST00000516665 103 ntBASIC0.26□□□□□ -2.37
CLDND1Q9NY35 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
CLDND1Q9NY35 SNORD115-25-201ENST00000362619 82 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 MIR892B-201ENST00000401279 77 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 MIR4802-201ENST00000581881 80 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 AC104408.1-201ENST00000605241 170 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 MIR6773-201ENST00000612812 74 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 AL627230.5-201ENST00000619807 58 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 MIR6514-201ENST00000622549 70 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 AC090617.8-201ENST00000623339 167 ntBASIC0.25□□□□□ -2.37
CLDND1Q9NY35 RNU6-337P-201ENST00000391243 106 ntBASIC0.24□□□□□ -2.37
CLDND1Q9NY35 RNU6-180P-201ENST00000516697 61 ntBASIC0.24□□□□□ -2.37
CLDND1Q9NY35 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.24□□□□□ -2.37
CLDND1Q9NY35 U6.111-201ENST00000636093 83 ntBASIC0.24□□□□□ -2.37
CLDND1Q9NY35 RNA5SP98-201ENST00000363158 137 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 Y_RNA.443-201ENST00000384135 111 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 RNA5SP163-201ENST00000410304 99 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 RNU6-1089P-201ENST00000516473 104 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 CR383656.4-201ENST00000546909 122 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 MIR4743-201ENST00000584576 69 ntBASIC0.23□□□□□ -2.37
CLDND1Q9NY35 RNU6-502P-201ENST00000362419 108 ntBASIC0.22□□□□□ -2.37
CLDND1Q9NY35 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
CLDND1Q9NY35 RNU6-630P-201ENST00000391258 106 ntBASIC0.22□□□□□ -2.37
CLDND1Q9NY35 CYP3A54P-201ENST00000566950 75 ntBASIC0.22□□□□□ -2.37
CLDND1Q9NY35 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
CLDND1Q9NY35 U2.7-201ENST00000619197 100 ntBASIC0.21□□□□□ -2.38
CLDND1Q9NY35 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
CLDND1Q9NY35 AP000676.1-201ENST00000533307 52 ntBASIC0.2□□□□□ -2.38
CLDND1Q9NY35 MIR148A-201ENST00000362215 68 ntBASIC0.19□□□□□ -2.38
CLDND1Q9NY35 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
CLDND1Q9NY35 MIRLET7B-201ENST00000385140 83 ntBASIC0.19□□□□□ -2.38
CLDND1Q9NY35 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
CLDND1Q9NY35 AC005520.4-201ENST00000604337 90 ntBASIC0.19□□□□□ -2.38
CLDND1Q9NY35 RNA5SP215-201ENST00000363440 122 ntBASIC0.18□□□□□ -2.38
CLDND1Q9NY35 SNORA25.4-201ENST00000363666 124 ntBASIC0.18□□□□□ -2.38
CLDND1Q9NY35 Y_RNA.375-201ENST00000365625 101 ntBASIC0.18□□□□□ -2.38
CLDND1Q9NY35 MIR548C-201ENST00000384815 97 ntBASIC0.18□□□□□ -2.38
CLDND1Q9NY35 AC139453.2-201ENST00000487255 133 ntBASIC0.18□□□□□ -2.38
CLDND1Q9NY35 RNU6-800P-201ENST00000384473 103 ntBASIC0.17□□□□□ -2.38
CLDND1Q9NY35 SNORD114-5-201ENST00000362928 70 ntBASIC0.16□□□□□ -2.38
CLDND1Q9NY35 Y_RNA.185-201ENST00000363894 100 ntBASIC0.16□□□□□ -2.38
CLDND1Q9NY35 RNU7-165P-201ENST00000458864 60 ntBASIC0.16□□□□□ -2.38
CLDND1Q9NY35 snoU13.19-201ENST00000459148 104 ntBASIC0.16□□□□□ -2.38
CLDND1Q9NY35 Y_RNA.386-201ENST00000383913 105 ntBASIC0.15□□□□□ -2.39
CLDND1Q9NY35 MIR1255B2-201ENST00000408618 67 ntBASIC0.15□□□□□ -2.39
CLDND1Q9NY35 RNU7-159P-201ENST00000459284 62 ntBASIC0.15□□□□□ -2.39
CLDND1Q9NY35 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
CLDND1Q9NY35 RNU7-174P-201ENST00000516248 59 ntBASIC0.14□□□□□ -2.39
CLDND1Q9NY35 MIR6507-201ENST00000613630 70 ntBASIC0.14□□□□□ -2.39
CLDND1Q9NY35 RNU6-590P-201ENST00000365039 107 ntBASIC0.12□□□□□ -2.39
CLDND1Q9NY35 MIR517B-201ENST00000385102 67 ntBASIC0.12□□□□□ -2.39
CLDND1Q9NY35 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CLDND1Q9NY35 AL021921.1-201ENST00000442774 93 ntBASIC0.12□□□□□ -2.39
CLDND1Q9NY35 Z95118.1-201ENST00000421372 247 ntBASIC0.11□□□□□ -2.39
CLDND1Q9NY35 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.11□□□□□ -2.39
CLDND1Q9NY35 RNU6-518P-201ENST00000516056 96 ntBASIC0.11□□□□□ -2.39
CLDND1Q9NY35 RNU6-542P-201ENST00000516405 103 ntBASIC0.11□□□□□ -2.39
CLDND1Q9NY35 MIR548V-201ENST00000584165 80 ntBASIC0.11□□□□□ -2.39
CLDND1Q9NY35 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
CLDND1Q9NY35 RNA5SP25-201ENST00000410815 110 ntBASIC0.1□□□□□ -2.39
CLDND1Q9NY35 RNA5SP470-201ENST00000516463 106 ntBASIC0.1□□□□□ -2.39
CLDND1Q9NY35 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms