Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 RNU6-22P-201ENST00000384355 107 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 RNU7-154P-201ENST00000516194 62 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 RNU6-479P-201ENST00000516348 105 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 RNU6-109P-201ENST00000516364 107 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 RNU6-184P-201ENST00000516514 107 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 MIR6739-201ENST00000622461 75 ntBASIC-1.36□□□□□ -2.63
CHCHD3Q9NX63 SNORA19-201ENST00000384737 128 ntBASIC-1.37□□□□□ -2.63
CHCHD3Q9NX63 SNORD77.2-201ENST00000391045 68 ntBASIC-1.37□□□□□ -2.63
CHCHD3Q9NX63 MIR1255B2-201ENST00000408618 67 ntBASIC-1.37□□□□□ -2.63
CHCHD3Q9NX63 RNU6-162P-201ENST00000516228 103 ntBASIC-1.37□□□□□ -2.63
CHCHD3Q9NX63 AC090617.8-201ENST00000623339 167 ntBASIC-1.37□□□□□ -2.63
CHCHD3Q9NX63 MIR124-2-201ENST00000385081 109 ntBASIC-1.38□□□□□ -2.63
CHCHD3Q9NX63 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.38□□□□□ -2.63
CHCHD3Q9NX63 CYP3A54P-201ENST00000566950 75 ntBASIC-1.38□□□□□ -2.63
CHCHD3Q9NX63 RNU6-924P-201ENST00000362926 108 ntBASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 RNU6-340P-201ENST00000364005 107 ntBASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 MIR147A-201ENST00000385079 72 ntBASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 SNX3P1X-201ENST00000414887 175 ntBASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
CHCHD3Q9NX63 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.4□□□□□ -2.63
CHCHD3Q9NX63 AL031737.1-201ENST00000450125 223 ntBASIC-1.4□□□□□ -2.63
CHCHD3Q9NX63 RNU6-313P-201ENST00000516317 112 ntBASIC-1.4□□□□□ -2.63
CHCHD3Q9NX63 MIR4464-201ENST00000580818 92 ntBASIC-1.4□□□□□ -2.63
CHCHD3Q9NX63 AL445584.3-201ENST00000617173 78 ntBASIC-1.4□□□□□ -2.63
CHCHD3Q9NX63 RNA5SP331-201ENST00000364986 107 ntBASIC-1.42□□□□□ -2.64
CHCHD3Q9NX63 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
CHCHD3Q9NX63 RNU6-633P-201ENST00000362612 103 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 RNU7-153P-201ENST00000516455 62 ntBASIC-1.43□□□□□ -2.64
CHCHD3Q9NX63 SNORD114-25-201ENST00000363742 72 ntBASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 AL021921.1-201ENST00000442774 93 ntBASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 MIR6888-201ENST00000621977 67 ntBASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 MIR4320-201ENST00000636981 65 ntBASIC-1.45□□□□□ -2.64
CHCHD3Q9NX63 MT-TR-201ENST00000387439 65 ntBASIC-1.46□□□□□ -2.64
CHCHD3Q9NX63 AC132825.6-201ENST00000638861 357 ntBASIC-1.46□□□□□ -2.64
CHCHD3Q9NX63 SNORD115-27-201ENST00000364430 82 ntBASIC-1.47□□□□□ -2.64
CHCHD3Q9NX63 SNORD114-17-201ENST00000364699 75 ntBASIC-1.47□□□□□ -2.64
CHCHD3Q9NX63 MIR4668-201ENST00000582284 70 ntBASIC-1.47□□□□□ -2.64
CHCHD3Q9NX63 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.49□□□□□ -2.65
CHCHD3Q9NX63 AL035461.1-201ENST00000421490 332 ntBASIC-1.49□□□□□ -2.65
CHCHD3Q9NX63 RNA5SP192-201ENST00000364404 120 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 RNU6-431P-201ENST00000383874 107 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 SNORD116-22-201ENST00000384430 92 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 SNORD64-201ENST00000386683 67 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 RNU2-51P-201ENST00000410708 197 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 SNORA40.13-201ENST00000516379 120 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 snoU83B.1-201ENST00000517136 88 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 MIR378F-201ENST00000578143 78 ntBASIC-1.5□□□□□ -2.65
CHCHD3Q9NX63 RNU6-624P-201ENST00000363411 107 ntBASIC-1.51□□□□□ -2.65
CHCHD3Q9NX63 AC093729.1-201ENST00000513074 128 ntBASIC-1.51□□□□□ -2.65
CHCHD3Q9NX63 AC140658.3-201ENST00000567603 271 ntBASIC-1.51□□□□□ -2.65
CHCHD3Q9NX63 RNU6-518P-201ENST00000516056 96 ntBASIC-1.52□□□□□ -2.65
CHCHD3Q9NX63 MIR3165-201ENST00000579874 75 ntBASIC-1.52□□□□□ -2.65
CHCHD3Q9NX63 uc_338.19-201ENST00000616808 99 ntBASIC-1.52□□□□□ -2.65
CHCHD3Q9NX63 RNU6-557P-201ENST00000516842 110 ntBASIC-1.53□□□□□ -2.65
CHCHD3Q9NX63 MIR382-201ENST00000637119 76 ntBASIC-1.53□□□□□ -2.65
CHCHD3Q9NX63 SNORD115-33-201ENST00000363723 82 ntBASIC-1.54□□□□□ -2.66
CHCHD3Q9NX63 SNORD113-1-201ENST00000365321 69 ntBASIC-1.54□□□□□ -2.66
CHCHD3Q9NX63 SNORA26.4-201ENST00000391188 123 ntBASIC-1.54□□□□□ -2.66
CHCHD3Q9NX63 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.54□□□□□ -2.66
CHCHD3Q9NX63 MIR3910-1-201ENST00000580936 111 ntBASIC-1.54□□□□□ -2.66
CHCHD3Q9NX63 RNU6-24P-201ENST00000384440 107 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 MIR519A2-201ENST00000384990 87 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 AL500527.2-201ENST00000454105 95 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 RNU6-807P-201ENST00000516805 107 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 MIR3115-201ENST00000577915 68 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 AP001318.4-201ENST00000616637 121 ntBASIC-1.55□□□□□ -2.66
CHCHD3Q9NX63 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 RNU6-755P-201ENST00000364400 103 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 RNA5SP461-201ENST00000516451 104 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 MIR4499-201ENST00000584834 69 ntBASIC-1.56□□□□□ -2.66
CHCHD3Q9NX63 MALAT1.1-201ENST00000618249 95 ntBASIC-1.57□□□□□ -2.66
CHCHD3Q9NX63 MIR450A1-201ENST00000362262 91 ntBASIC-1.58□□□□□ -2.66
CHCHD3Q9NX63 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.58□□□□□ -2.66
CHCHD3Q9NX63 RNY4P18-201ENST00000391107 89 ntBASIC-1.58□□□□□ -2.66
CHCHD3Q9NX63 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.58□□□□□ -2.66
CHCHD3Q9NX63 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.59□□□□□ -2.66
CHCHD3Q9NX63 SCARNA18B-201ENST00000458806 135 ntBASIC-1.59□□□□□ -2.66
CHCHD3Q9NX63 RNU6-303P-201ENST00000517091 106 ntBASIC-1.59□□□□□ -2.66
CHCHD3Q9NX63 MIR601-201ENST00000385256 79 ntBASIC-1.6□□□□□ -2.67
CHCHD3Q9NX63 MIR1468-201ENST00000410600 86 ntBASIC-1.6□□□□□ -2.67
CHCHD3Q9NX63 RNU6-656P-201ENST00000516785 107 ntBASIC-1.6□□□□□ -2.67
CHCHD3Q9NX63 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.61□□□□□ -2.67
CHCHD3Q9NX63 MIR29B1-201ENST00000385015 81 ntBASIC-1.62□□□□□ -2.67
CHCHD3Q9NX63 RNU6-219P-201ENST00000364728 107 ntBASIC-1.63□□□□□ -2.67
CHCHD3Q9NX63 RNU6-497P-201ENST00000365316 104 ntBASIC-1.63□□□□□ -2.67
CHCHD3Q9NX63 RNU6-32P-201ENST00000383948 107 ntBASIC-1.63□□□□□ -2.67
CHCHD3Q9NX63 RNU6-13P-201ENST00000384248 107 ntBASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 267.3 ms