Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNA5SP200-201ENST00000516360 103 ntBASIC2.93□□□□□ -1.94
SENP3Q9H4L4 Y_RNA.423-201ENST00000384057 113 ntBASIC2.92□□□□□ -1.94
SENP3Q9H4L4 RNA5SP489-201ENST00000410986 109 ntBASIC2.92□□□□□ -1.94
SENP3Q9H4L4 SNORA25.15-201ENST00000516487 89 ntBASIC2.92□□□□□ -1.94
SENP3Q9H4L4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SENP3Q9H4L4 MIR1276-201ENST00000408707 83 ntBASIC2.91□□□□□ -1.94
SENP3Q9H4L4 RNA5SP222-201ENST00000411039 105 ntBASIC2.91□□□□□ -1.94
SENP3Q9H4L4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
SENP3Q9H4L4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SENP3Q9H4L4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SENP3Q9H4L4 SNORD60-201ENST00000383903 83 ntBASIC2.9□□□□□ -1.95
SENP3Q9H4L4 MIR643-201ENST00000385267 97 ntBASIC2.89□□□□□ -1.95
SENP3Q9H4L4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SENP3Q9H4L4 RNA5SP517-201ENST00000364724 117 ntBASIC2.88□□□□□ -1.95
SENP3Q9H4L4 SNORA25.18-201ENST00000607153 114 ntBASIC2.87□□□□□ -1.95
SENP3Q9H4L4 MIR6504-201ENST00000613520 61 ntBASIC2.87□□□□□ -1.95
SENP3Q9H4L4 RNA5SP233-201ENST00000459153 113 ntBASIC2.86□□□□□ -1.95
SENP3Q9H4L4 RNA5SP255-201ENST00000516370 107 ntBASIC2.85□□□□□ -1.95
SENP3Q9H4L4 RNA5SP37-201ENST00000365420 130 ntBASIC2.84□□□□□ -1.95
SENP3Q9H4L4 RNA5SP220-201ENST00000516298 104 ntBASIC2.84□□□□□ -1.95
SENP3Q9H4L4 MIR4452-201ENST00000583004 71 ntBASIC2.84□□□□□ -1.95
SENP3Q9H4L4 RNU6-1233P-201ENST00000362922 102 ntBASIC2.83□□□□□ -1.96
SENP3Q9H4L4 MIR106A-201ENST00000384870 81 ntBASIC2.83□□□□□ -1.96
SENP3Q9H4L4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SENP3Q9H4L4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.82□□□□□ -1.96
SENP3Q9H4L4 SNORD114-26-201ENST00000363543 72 ntBASIC2.81□□□□□ -1.96
SENP3Q9H4L4 AL356379.1-201ENST00000414105 126 ntBASIC2.81□□□□□ -1.96
SENP3Q9H4L4 RNU6-973P-201ENST00000364690 107 ntBASIC2.8□□□□□ -1.96
SENP3Q9H4L4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.8□□□□□ -1.96
SENP3Q9H4L4 AL137847.3-201ENST00000611521 109 ntBASIC2.8□□□□□ -1.96
SENP3Q9H4L4 RNU7-95P-201ENST00000459222 64 ntBASIC2.79□□□□□ -1.96
SENP3Q9H4L4 RNU4-54P-201ENST00000516428 129 ntBASIC2.79□□□□□ -1.96
SENP3Q9H4L4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SENP3Q9H4L4 MIR518A1-201ENST00000385068 85 ntBASIC2.78□□□□□ -1.96
SENP3Q9H4L4 MIR876-201ENST00000401147 81 ntBASIC2.78□□□□□ -1.96
SENP3Q9H4L4 MIR5002-201ENST00000584713 97 ntBASIC2.78□□□□□ -1.96
SENP3Q9H4L4 Z82195.2-201ENST00000612348 18351 ntBASIC2.78□□□□□ -1.96
SENP3Q9H4L4 RNA5SP160-201ENST00000364866 120 ntBASIC2.77□□□□□ -1.97
SENP3Q9H4L4 RNU6-608P-201ENST00000383927 104 ntBASIC2.77□□□□□ -1.97
SENP3Q9H4L4 RNA5SP181-201ENST00000410246 98 ntBASIC2.77□□□□□ -1.97
SENP3Q9H4L4 MIR9-3-201ENST00000385084 90 ntBASIC2.76□□□□□ -1.97
SENP3Q9H4L4 RNU7-55P-201ENST00000459426 62 ntBASIC2.76□□□□□ -1.97
SENP3Q9H4L4 MIR3925-201ENST00000584674 77 ntBASIC2.76□□□□□ -1.97
SENP3Q9H4L4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
SENP3Q9H4L4 RNU6-836P-201ENST00000362920 107 ntBASIC2.75□□□□□ -1.97
SENP3Q9H4L4 MIR124-2-201ENST00000385081 109 ntBASIC2.75□□□□□ -1.97
SENP3Q9H4L4 MIR548N-201ENST00000408742 75 ntBASIC2.75□□□□□ -1.97
SENP3Q9H4L4 MIR6515-201ENST00000619843 57 ntBASIC2.75□□□□□ -1.97
SENP3Q9H4L4 SNORD114-24-201ENST00000365029 72 ntBASIC2.74□□□□□ -1.97
SENP3Q9H4L4 RNA5SP182-201ENST00000516064 82 ntBASIC2.74□□□□□ -1.97
SENP3Q9H4L4 ACA64.5-201ENST00000516207 127 ntBASIC2.74□□□□□ -1.97
SENP3Q9H4L4 RNA5SP98-201ENST00000363158 137 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 Y_RNA.320-201ENST00000365144 102 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 SNORD114-22-201ENST00000365423 72 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 AL096840.1-201ENST00000603287 93 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
SENP3Q9H4L4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.72□□□□□ -1.97
SENP3Q9H4L4 AP002795.1-201ENST00000534879 84 ntBASIC2.72□□□□□ -1.97
SENP3Q9H4L4 MIR6755-201ENST00000619993 66 ntBASIC2.72□□□□□ -1.97
SENP3Q9H4L4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
SENP3Q9H4L4 Y_RNA.30-201ENST00000362572 97 ntBASIC2.71□□□□□ -1.98
SENP3Q9H4L4 AC096531.1-201ENST00000419107 107 ntBASIC2.71□□□□□ -1.98
SENP3Q9H4L4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC2.71□□□□□ -1.98
SENP3Q9H4L4 SNORA42.1-201ENST00000363515 137 ntBASIC2.7□□□□□ -1.98
SENP3Q9H4L4 MIR760-201ENST00000390220 80 ntBASIC2.7□□□□□ -1.98
SENP3Q9H4L4 MIR5704-201ENST00000584029 77 ntBASIC2.7□□□□□ -1.98
SENP3Q9H4L4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SENP3Q9H4L4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SENP3Q9H4L4 SNORA36.2-201ENST00000384004 127 ntBASIC2.69□□□□□ -1.98
SENP3Q9H4L4 RNA5SP102-201ENST00000516865 106 ntBASIC2.69□□□□□ -1.98
SENP3Q9H4L4 PVT1_3.1-201ENST00000620853 95 ntBASIC2.69□□□□□ -1.98
SENP3Q9H4L4 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
SENP3Q9H4L4 SNORD118-201ENST00000363593 134 ntBASIC2.68□□□□□ -1.98
SENP3Q9H4L4 Y_RNA.178-201ENST00000363832 102 ntBASIC2.68□□□□□ -1.98
SENP3Q9H4L4 MIR618-201ENST00000385287 98 ntBASIC2.68□□□□□ -1.98
SENP3Q9H4L4 MIR8068-201ENST00000618032 68 ntBASIC2.67□□□□□ -1.98
SENP3Q9H4L4 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
SENP3Q9H4L4 Y_RNA.406-201ENST00000383984 100 ntBASIC2.66□□□□□ -1.98
SENP3Q9H4L4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC2.66□□□□□ -1.98
SENP3Q9H4L4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SENP3Q9H4L4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
SENP3Q9H4L4 AC104435.1-201ENST00000483483 166 ntBASIC2.64□□□□□ -1.99
SENP3Q9H4L4 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
SENP3Q9H4L4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.64□□□□□ -1.99
SENP3Q9H4L4 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
SENP3Q9H4L4 MIRLET7G-201ENST00000362280 84 ntBASIC2.62□□□□□ -1.99
SENP3Q9H4L4 SCARNA11.2-201ENST00000517183 154 ntBASIC2.62□□□□□ -1.99
SENP3Q9H4L4 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
SENP3Q9H4L4 MIR5683-201ENST00000636514 76 ntBASIC2.62□□□□□ -1.99
SENP3Q9H4L4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SENP3Q9H4L4 Y_RNA.129-201ENST00000363392 110 ntBASIC2.61□□□□□ -1.99
SENP3Q9H4L4 AC022709.1-201ENST00000615967 87 ntBASIC2.61□□□□□ -1.99
SENP3Q9H4L4 RNU6-392P-201ENST00000364926 101 ntBASIC2.6□□□□□ -1.99
SENP3Q9H4L4 SNORA40.8-201ENST00000411034 126 ntBASIC2.6□□□□□ -1.99
SENP3Q9H4L4 MIR4285-201ENST00000581001 85 ntBASIC2.6□□□□□ -1.99
SENP3Q9H4L4 RNU6-68P-201ENST00000516576 104 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms