Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 MIR548A3-201ENST00000385297 97 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 RNU6-258P-201ENST00000390884 101 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 RNU6-587P-201ENST00000391282 106 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 U2.18-201ENST00000622185 84 ntBASIC-1.35□□□□□ -2.63
ALX4Q9H161 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 MIR548C-201ENST00000384815 97 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 AL450471.1-201ENST00000447509 127 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 MIR23C-201ENST00000579846 100 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 MIR3128-201ENST00000581957 66 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 MIR3170-201ENST00000582699 77 ntBASIC-1.36□□□□□ -2.63
ALX4Q9H161 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 RNU4-88P-201ENST00000411220 86 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 RNU6-980P-201ENST00000516925 103 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 AL117187.1-201ENST00000555482 181 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 U7.2-201ENST00000607576 63 ntBASIC-1.37□□□□□ -2.63
ALX4Q9H161 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.38□□□□□ -2.63
ALX4Q9H161 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.38□□□□□ -2.63
ALX4Q9H161 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.38□□□□□ -2.63
ALX4Q9H161 AC072026.1-201ENST00000605023 201 ntBASIC-1.38□□□□□ -2.63
ALX4Q9H161 U4.4-201ENST00000620626 117 ntBASIC-1.38□□□□□ -2.63
ALX4Q9H161 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 RNU6-972P-201ENST00000391208 107 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 MIR513C-201ENST00000401352 84 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 MIR1236-201ENST00000408340 102 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 RNU6-887P-201ENST00000410660 100 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.39□□□□□ -2.63
ALX4Q9H161 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 RNU6-682P-201ENST00000363843 106 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 MIR548X2-201ENST00000579776 100 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 AC013734.1-201ENST00000619329 111 ntBASIC-1.4□□□□□ -2.63
ALX4Q9H161 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
ALX4Q9H161 RNU6-330P-201ENST00000363015 107 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-681P-201ENST00000364012 104 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 SNORD115-31-201ENST00000365318 82 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 MIR569-201ENST00000385228 96 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-772P-201ENST00000516042 105 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-861P-201ENST00000516745 106 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-537P-201ENST00000517277 103 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.41□□□□□ -2.64
ALX4Q9H161 RNU6-766P-201ENST00000362478 107 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 RNU6-574P-201ENST00000384265 107 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 SNORD77.2-201ENST00000391045 68 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 RNU6-982P-201ENST00000516216 102 ntBASIC-1.42□□□□□ -2.64
ALX4Q9H161 AL157777.2-201ENST00000258070 137 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNA5SP405-201ENST00000363059 114 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNU6-698P-201ENST00000363523 107 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 SNORD116-10-201ENST00000363791 102 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 SNORA20.1-201ENST00000364790 130 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNU6-34P-201ENST00000364874 107 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 SNORD116-18-201ENST00000383961 92 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 SCARNA23-201ENST00000516060 130 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNU6-904P-201ENST00000516206 101 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 AC005520.4-201ENST00000604337 90 ntBASIC-1.43□□□□□ -2.64
ALX4Q9H161 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.44□□□□□ -2.64
ALX4Q9H161 MIR548W-201ENST00000581970 74 ntBASIC-1.44□□□□□ -2.64
ALX4Q9H161 MIR548V-201ENST00000584165 80 ntBASIC-1.44□□□□□ -2.64
ALX4Q9H161 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.44□□□□□ -2.64
ALX4Q9H161 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.44□□□□□ -2.64
ALX4Q9H161 MIR429-201ENST00000362106 83 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 RNU6-394P-201ENST00000410735 107 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 RNU7-107P-201ENST00000459121 61 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 snoU13.10-201ENST00000459301 103 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.45□□□□□ -2.64
ALX4Q9H161 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.46□□□□□ -2.64
ALX4Q9H161 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
ALX4Q9H161 RNU6-604P-201ENST00000390917 100 ntBASIC-1.46□□□□□ -2.64
ALX4Q9H161 SNORD113-2-201ENST00000391082 72 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms