Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC012531.4-201ENST00000616509 177 ntBASIC-1.29□□□□□ -2.62
SHANK3Q9BYB0 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.3□□□□□ -2.62
SHANK3Q9BYB0 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
SHANK3Q9BYB0 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.3□□□□□ -2.62
SHANK3Q9BYB0 MTND5P41-201ENST00000517498 206 ntBASIC-1.3□□□□□ -2.62
SHANK3Q9BYB0 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 RNU6-257P-201ENST00000410238 98 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 RNU4-61P-201ENST00000411243 107 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 AL021921.1-201ENST00000442774 93 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 MIR3914-2-201ENST00000637339 95 ntBASIC-1.31□□□□□ -2.62
SHANK3Q9BYB0 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.32□□□□□ -2.62
SHANK3Q9BYB0 U6.81-201ENST00000612550 106 ntBASIC-1.32□□□□□ -2.62
SHANK3Q9BYB0 U6.95-201ENST00000636931 70 ntBASIC-1.32□□□□□ -2.62
SHANK3Q9BYB0 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.33□□□□□ -2.62
SHANK3Q9BYB0 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.34□□□□□ -2.62
SHANK3Q9BYB0 MIR4770-201ENST00000579149 58 ntBASIC-1.34□□□□□ -2.62
SHANK3Q9BYB0 RNU6-886P-201ENST00000384319 105 ntBASIC-1.35□□□□□ -2.62
SHANK3Q9BYB0 AL450471.1-201ENST00000447509 127 ntBASIC-1.35□□□□□ -2.62
SHANK3Q9BYB0 RNU7-200P-201ENST00000516105 62 ntBASIC-1.35□□□□□ -2.62
SHANK3Q9BYB0 U7.5-201ENST00000517224 61 ntBASIC-1.35□□□□□ -2.62
SHANK3Q9BYB0 AC026421.1-201ENST00000519101 163 ntBASIC-1.35□□□□□ -2.62
SHANK3Q9BYB0 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 SNORD90-201ENST00000391145 111 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 RNU7-107P-201ENST00000459121 61 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 MIR4719-201ENST00000585233 84 ntBASIC-1.35□□□□□ -2.63
SHANK3Q9BYB0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.36□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.36□□□□□ -2.63
SHANK3Q9BYB0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.36□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 RNU6-340P-201ENST00000364005 107 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 RNU6-880P-201ENST00000384526 107 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 RNU7-61P-201ENST00000515897 61 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.37□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.38□□□□□ -2.63
SHANK3Q9BYB0 RNU6-904P-201ENST00000516206 101 ntBASIC-1.38□□□□□ -2.63
SHANK3Q9BYB0 RNU6-971P-201ENST00000516920 106 ntBASIC-1.38□□□□□ -2.63
SHANK3Q9BYB0 SNORD115-22-201ENST00000364456 82 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 RNY1P5-201ENST00000383890 115 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 MIR519C-201ENST00000385053 87 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 SNORD33.1-201ENST00000516213 88 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 RNU6-659P-201ENST00000516454 104 ntBASIC-1.39□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 RNU6-656P-201ENST00000516785 107 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.4□□□□□ -2.63
SHANK3Q9BYB0 SNORD115-37-201ENST00000363768 82 ntBASIC-1.41□□□□□ -2.64
SHANK3Q9BYB0 MIR507-201ENST00000385234 94 ntBASIC-1.41□□□□□ -2.64
SHANK3Q9BYB0 SNORD77.2-201ENST00000391045 68 ntBASIC-1.41□□□□□ -2.64
SHANK3Q9BYB0 MIR3675-201ENST00000583661 73 ntBASIC-1.41□□□□□ -2.64
SHANK3Q9BYB0 RNU6-624P-201ENST00000363411 107 ntBASIC-1.42□□□□□ -2.64
SHANK3Q9BYB0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
SHANK3Q9BYB0 AL035461.1-201ENST00000421490 332 ntBASIC-1.42□□□□□ -2.64
SHANK3Q9BYB0 RNU6-518P-201ENST00000516056 96 ntBASIC-1.42□□□□□ -2.64
SHANK3Q9BYB0 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.42□□□□□ -2.64
SHANK3Q9BYB0 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 SNORD116-21-201ENST00000384507 92 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 HLA-S-202ENST00000425174 53 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 RNA5SP26-201ENST00000362406 119 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 AL078595.1-201ENST00000404458 226 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 RNY4-201ENST00000516507 96 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 MIR5591-201ENST00000578248 65 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 MIR2052-201ENST00000636055 55 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 MIR5683-201ENST00000636514 76 ntBASIC-1.43□□□□□ -2.64
SHANK3Q9BYB0 RNU6-907P-201ENST00000390924 102 ntBASIC-1.44□□□□□ -2.64
SHANK3Q9BYB0 MIR1302-5-201ENST00000408164 150 ntBASIC-1.44□□□□□ -2.64
SHANK3Q9BYB0 RNU6-807P-201ENST00000516805 107 ntBASIC-1.44□□□□□ -2.64
SHANK3Q9BYB0 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.45□□□□□ -2.64
SHANK3Q9BYB0 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.45□□□□□ -2.64
SHANK3Q9BYB0 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.45□□□□□ -2.64
SHANK3Q9BYB0 AC018880.2-201ENST00000414265 201 ntBASIC-1.45□□□□□ -2.64
SHANK3Q9BYB0 RNU7-88P-201ENST00000458752 63 ntBASIC-1.45□□□□□ -2.64
SHANK3Q9BYB0 RNU6-774P-201ENST00000363238 107 ntBASIC-1.46□□□□□ -2.64
SHANK3Q9BYB0 SNORD19-201ENST00000391191 68 ntBASIC-1.46□□□□□ -2.64
SHANK3Q9BYB0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.46□□□□□ -2.64
SHANK3Q9BYB0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.46□□□□□ -2.64
SHANK3Q9BYB0 MIR429-201ENST00000362106 83 ntBASIC-1.47□□□□□ -2.64
SHANK3Q9BYB0 RNU7-153P-201ENST00000516455 62 ntBASIC-1.47□□□□□ -2.64
SHANK3Q9BYB0 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 MIR8485-201ENST00000401372 91 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 MIR23C-201ENST00000579846 100 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 U7.3-201ENST00000616123 62 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 U2.7-201ENST00000619197 100 ntBASIC-1.48□□□□□ -2.65
SHANK3Q9BYB0 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 RNU6-246P-201ENST00000384702 107 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 MIR590-201ENST00000385008 97 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 MIR496-201ENST00000385226 102 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 AP002795.1-201ENST00000534879 84 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 RNU6-696P-201ENST00000390834 107 ntBASIC-1.49□□□□□ -2.65
SHANK3Q9BYB0 RNU2-51P-201ENST00000410708 197 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms