Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 U6.96-201ENST00000636425 70 ntBASIC0.03□□□□□ -2.4
FOXN4Q96NZ1 SNORD115-25-201ENST00000362619 82 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 Y_RNA.244-201ENST00000364484 109 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 RNU7-165P-201ENST00000458864 60 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 SNORD2-201ENST00000459163 69 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 MIR4743-201ENST00000584576 69 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 AC145423.2-201ENST00000610631 239 ntBASIC0.02□□□□□ -2.41
FOXN4Q96NZ1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 RNU6-982P-201ENST00000516216 102 ntBASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR6507-201ENST00000613630 70 ntBASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR6739-201ENST00000622461 75 ntBASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 AC090617.8-201ENST00000623339 167 ntBASIC0.01□□□□□ -2.41
FOXN4Q96NZ1 SNORD115-22-201ENST00000364456 82 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 Y_RNA.250-201ENST00000364542 110 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 SNORA15B-2-201ENST00000384058 135 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 SNORA15B-1-201ENST00000384334 135 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 RNU6-1162P-201ENST00000384443 104 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 SNORD45A-201ENST00000384512 84 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 RNU6-1241P-201ENST00000384536 107 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 MIR521-2-201ENST00000384818 87 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 FAS-AS1.1-201ENST00000615327 126 ntBASIC0□□□□□ -2.41
FOXN4Q96NZ1 MIR148A-201ENST00000362215 68 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 RNU6-645P-201ENST00000364649 106 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR154-201ENST00000385243 84 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 RNU6-337P-201ENST00000391243 106 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 RNU6-656P-201ENST00000516785 107 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR6773-201ENST00000612812 74 ntBASIC-0.01□□□□□ -2.41
FOXN4Q96NZ1 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
FOXN4Q96NZ1 SNORD113.1-201ENST00000363280 73 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-411P-201ENST00000384451 107 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-587P-201ENST00000391282 106 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 AC244250.2-201ENST00000418731 148 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-687P-201ENST00000516443 89 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 MIR8053-201ENST00000613344 75 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 uc_338.36-201ENST00000622331 158 ntBASIC-0.03□□□□□ -2.41
FOXN4Q96NZ1 SNORD115-31-201ENST00000365318 82 ntBASIC-0.04□□□□□ -2.42
FOXN4Q96NZ1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.04□□□□□ -2.42
FOXN4Q96NZ1 CYP3A54P-201ENST00000566950 75 ntBASIC-0.04□□□□□ -2.42
FOXN4Q96NZ1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
FOXN4Q96NZ1 RNU6-776P-201ENST00000364403 104 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 MIR548C-201ENST00000384815 97 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 MIR9-2-201ENST00000384838 87 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 MIR329-2-201ENST00000385029 84 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 MIRLET7B-201ENST00000385140 83 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 RNU6-881P-201ENST00000516813 102 ntBASIC-0.05□□□□□ -2.42
FOXN4Q96NZ1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.06□□□□□ -2.42
FOXN4Q96NZ1 MIR1255B2-201ENST00000408618 67 ntBASIC-0.06□□□□□ -2.42
FOXN4Q96NZ1 MIR4662A-201ENST00000637499 67 ntBASIC-0.06□□□□□ -2.42
FOXN4Q96NZ1 SNORD49B-201ENST00000365172 72 ntBASIC-0.07□□□□□ -2.42
FOXN4Q96NZ1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
FOXN4Q96NZ1 RNU6-895P-201ENST00000384125 103 ntBASIC-0.07□□□□□ -2.42
FOXN4Q96NZ1 RNU6-523P-201ENST00000516304 54 ntBASIC-0.07□□□□□ -2.42
FOXN4Q96NZ1 RNU6-638P-201ENST00000516582 104 ntBASIC-0.07□□□□□ -2.42
FOXN4Q96NZ1 MIR655-201ENST00000362159 97 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 MTND4LP1-201ENST00000446263 157 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 snoR1.1-201ENST00000628177 80 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 MIR6759-201ENST00000638110 65 ntBASIC-0.08□□□□□ -2.42
FOXN4Q96NZ1 RNU6-668P-201ENST00000364180 107 ntBASIC-0.09□□□□□ -2.42
FOXN4Q96NZ1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.09□□□□□ -2.42
FOXN4Q96NZ1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.09□□□□□ -2.42
FOXN4Q96NZ1 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
FOXN4Q96NZ1 AL391099.1-201ENST00000624635 187 ntBASIC-0.09□□□□□ -2.42
FOXN4Q96NZ1 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 AL445193.1-201ENST00000441183 141 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 RNU6-518P-201ENST00000516056 96 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 U2.7-201ENST00000619197 100 ntBASIC-0.1□□□□□ -2.43
FOXN4Q96NZ1 SNORD116-24-201ENST00000384549 92 ntBASIC-0.11□□□□□ -2.43
FOXN4Q96NZ1 RNU6-540P-201ENST00000384622 101 ntBASIC-0.11□□□□□ -2.43
FOXN4Q96NZ1 RNU6-634P-201ENST00000459134 106 ntBASIC-0.11□□□□□ -2.43
FOXN4Q96NZ1 MIR4432-201ENST00000581823 84 ntBASIC-0.11□□□□□ -2.43
FOXN4Q96NZ1 MIR548V-201ENST00000584165 80 ntBASIC-0.11□□□□□ -2.43
FOXN4Q96NZ1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.12□□□□□ -2.43
FOXN4Q96NZ1 SNORD56B-201ENST00000384713 71 ntBASIC-0.12□□□□□ -2.43
FOXN4Q96NZ1 MIR519A2-201ENST00000384990 87 ntBASIC-0.12□□□□□ -2.43
FOXN4Q96NZ1 MIR5704-201ENST00000584029 77 ntBASIC-0.12□□□□□ -2.43
FOXN4Q96NZ1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.13□□□□□ -2.43
FOXN4Q96NZ1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.13□□□□□ -2.43
FOXN4Q96NZ1 RNU6-35P-201ENST00000384530 107 ntBASIC-0.13□□□□□ -2.43
FOXN4Q96NZ1 AL353803.5-201ENST00000599815 141 ntBASIC-0.13□□□□□ -2.43
FOXN4Q96NZ1 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
FOXN4Q96NZ1 RNU6-663P-201ENST00000391105 106 ntBASIC-0.14□□□□□ -2.43
FOXN4Q96NZ1 SNORD30.1-201ENST00000391309 70 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms