Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU6-788P-201ENST00000390967 104 ntBASIC0.33□□□□□ -2.36
PDLIM2Q96JY6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
PDLIM2Q96JY6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
PDLIM2Q96JY6 Y_RNA.386-201ENST00000383913 105 ntBASIC0.32□□□□□ -2.36
PDLIM2Q96JY6 SNORA49-201ENST00000386157 136 ntBASIC0.32□□□□□ -2.36
PDLIM2Q96JY6 RNU6-782P-201ENST00000516852 104 ntBASIC0.32□□□□□ -2.36
PDLIM2Q96JY6 AC125388.1-201ENST00000459631 156 ntBASIC0.31□□□□□ -2.36
PDLIM2Q96JY6 CYP3A54P-201ENST00000566950 75 ntBASIC0.31□□□□□ -2.36
PDLIM2Q96JY6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 RNA5SP215-201ENST00000363440 122 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 Y_RNA.340-201ENST00000365330 92 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 Y_RNA.375-201ENST00000365625 101 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 MIR5093-201ENST00000583199 100 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 MIR548V-201ENST00000584165 80 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 U2.7-201ENST00000619197 100 ntBASIC0.3□□□□□ -2.36
PDLIM2Q96JY6 AC090617.8-201ENST00000623339 167 ntBASIC0.29□□□□□ -2.36
PDLIM2Q96JY6 RNA5SP325-201ENST00000363756 130 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 RNA5SP299-201ENST00000391203 116 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 RNU6-542P-201ENST00000516405 103 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 MIR6773-201ENST00000612812 74 ntBASIC0.28□□□□□ -2.36
PDLIM2Q96JY6 SNORD115-25-201ENST00000362619 82 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 MIR106A-201ENST00000384870 81 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 MIR517B-201ENST00000385102 67 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 RNU6-337P-201ENST00000391243 106 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 AP000676.1-201ENST00000533307 52 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
PDLIM2Q96JY6 RNU6-471P-201ENST00000383944 106 ntBASIC0.26□□□□□ -2.37
PDLIM2Q96JY6 MIR1255B2-201ENST00000408618 67 ntBASIC0.26□□□□□ -2.37
PDLIM2Q96JY6 MIR330-201ENST00000362196 94 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 RNU6-502P-201ENST00000362419 108 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 RNU6-302P-201ENST00000365249 107 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 RNA5SP163-201ENST00000410304 99 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 MIR4511-201ENST00000582784 87 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 MIR6514-201ENST00000622549 70 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 AC103706.3-201ENST00000636297 85 ntBASIC0.25□□□□□ -2.37
PDLIM2Q96JY6 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 MIR630-201ENST00000384957 97 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 RNU6-518P-201ENST00000516056 96 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 RNU7-174P-201ENST00000516248 59 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 MIR924-201ENST00000638017 53 ntBASIC0.24□□□□□ -2.37
PDLIM2Q96JY6 MIR593-201ENST00000384856 100 ntBASIC0.23□□□□□ -2.37
PDLIM2Q96JY6 MIR892B-201ENST00000401279 77 ntBASIC0.23□□□□□ -2.37
PDLIM2Q96JY6 MIR1265-201ENST00000408444 86 ntBASIC0.23□□□□□ -2.37
PDLIM2Q96JY6 AL021921.1-201ENST00000442774 93 ntBASIC0.23□□□□□ -2.37
PDLIM2Q96JY6 RNA5SP330-201ENST00000517096 96 ntBASIC0.23□□□□□ -2.37
PDLIM2Q96JY6 MIRLET7B-201ENST00000385140 83 ntBASIC0.22□□□□□ -2.37
PDLIM2Q96JY6 MIR548H2-201ENST00000408874 88 ntBASIC0.22□□□□□ -2.37
PDLIM2Q96JY6 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
PDLIM2Q96JY6 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
PDLIM2Q96JY6 RNU6-698P-201ENST00000363523 107 ntBASIC0.21□□□□□ -2.38
PDLIM2Q96JY6 RNU6-34P-201ENST00000364874 107 ntBASIC0.21□□□□□ -2.38
PDLIM2Q96JY6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.21□□□□□ -2.38
PDLIM2Q96JY6 CR383656.4-201ENST00000546909 122 ntBASIC0.21□□□□□ -2.38
PDLIM2Q96JY6 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
PDLIM2Q96JY6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
PDLIM2Q96JY6 SNORD113-2-201ENST00000391082 72 ntBASIC0.2□□□□□ -2.38
PDLIM2Q96JY6 SCARNA21.1-201ENST00000515996 128 ntBASIC0.2□□□□□ -2.38
PDLIM2Q96JY6 RNU6-180P-201ENST00000516697 61 ntBASIC0.2□□□□□ -2.38
PDLIM2Q96JY6 Y_RNA.246-201ENST00000364495 108 ntBASIC0.19□□□□□ -2.38
PDLIM2Q96JY6 MIR519A2-201ENST00000384990 87 ntBASIC0.19□□□□□ -2.38
PDLIM2Q96JY6 RNA5SP470-201ENST00000516463 106 ntBASIC0.19□□□□□ -2.38
PDLIM2Q96JY6 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
PDLIM2Q96JY6 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
PDLIM2Q96JY6 RNA5SP457-201ENST00000363657 124 ntBASIC0.18□□□□□ -2.38
PDLIM2Q96JY6 MIR9-2-201ENST00000384838 87 ntBASIC0.18□□□□□ -2.38
PDLIM2Q96JY6 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
PDLIM2Q96JY6 U4.4-201ENST00000620626 117 ntBASIC0.18□□□□□ -2.38
PDLIM2Q96JY6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.17□□□□□ -2.38
PDLIM2Q96JY6 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
PDLIM2Q96JY6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
PDLIM2Q96JY6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
PDLIM2Q96JY6 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
PDLIM2Q96JY6 SNORA25.5-201ENST00000363782 126 ntBASIC0.16□□□□□ -2.38
PDLIM2Q96JY6 MIR1197-201ENST00000408818 88 ntBASIC0.16□□□□□ -2.38
PDLIM2Q96JY6 MIR4743-201ENST00000584576 69 ntBASIC0.16□□□□□ -2.38
PDLIM2Q96JY6 RNU6-92P-201ENST00000605893 104 ntBASIC0.16□□□□□ -2.38
PDLIM2Q96JY6 snoR1.1-201ENST00000628177 80 ntBASIC0.16□□□□□ -2.38
PDLIM2Q96JY6 MIR148A-201ENST00000362215 68 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 Y_RNA.325-201ENST00000365171 122 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 RNU7-159P-201ENST00000459284 62 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 uc_338.36-201ENST00000622331 158 ntBASIC0.15□□□□□ -2.39
PDLIM2Q96JY6 RNA5SP192-201ENST00000364404 120 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 RNU6-1246P-201ENST00000391064 107 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 AC110620.1-201ENST00000416042 228 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 RNU7-165P-201ENST00000458864 60 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 RNU7-154P-201ENST00000516194 62 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 MIR6507-201ENST00000613630 70 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 MIR2909-201ENST00000617113 69 ntBASIC0.14□□□□□ -2.39
PDLIM2Q96JY6 RNU6-455P-201ENST00000384681 107 ntBASIC0.13□□□□□ -2.39
PDLIM2Q96JY6 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms