Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 snoU13.19-201ENST00000459148 104 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
CTHRC1Q96CG8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORA49-201ENST00000386157 136 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORD78.1-201ENST00000390866 65 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 Z95118.1-201ENST00000421372 247 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORA40.17-201ENST00000517256 115 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 MIR1295B-201ENST00000636144 60 ntBASIC-0.02□□□□□ -2.41
CTHRC1Q96CG8 SNORD115-25-201ENST00000362619 82 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 RNU6-330P-201ENST00000363015 107 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 MIR1255A-201ENST00000408338 113 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 AL627230.5-201ENST00000619807 58 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 U6.96-201ENST00000636425 70 ntBASIC-0.03□□□□□ -2.41
CTHRC1Q96CG8 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
CTHRC1Q96CG8 RNU6-228P-201ENST00000362700 106 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 MIR6507-201ENST00000613630 70 ntBASIC-0.05□□□□□ -2.42
CTHRC1Q96CG8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
CTHRC1Q96CG8 MIR521-2-201ENST00000384818 87 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 MIR4493-201ENST00000584016 73 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 AC145423.2-201ENST00000610631 239 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 U7.4-201ENST00000614961 63 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 MIR6739-201ENST00000622461 75 ntBASIC-0.07□□□□□ -2.42
CTHRC1Q96CG8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.08□□□□□ -2.42
CTHRC1Q96CG8 RNU6-279P-201ENST00000391297 101 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 AC244250.2-201ENST00000418731 148 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 RNU6-70P-201ENST00000516438 60 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 MIR8053-201ENST00000613344 75 ntBASIC-0.09□□□□□ -2.42
CTHRC1Q96CG8 MIR604-201ENST00000384880 94 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 RNU6-857P-201ENST00000515893 110 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 MIR6773-201ENST00000612812 74 ntBASIC-0.1□□□□□ -2.43
CTHRC1Q96CG8 RNU6-502P-201ENST00000362419 108 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.11□□□□□ -2.43
CTHRC1Q96CG8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 SNORD49B-201ENST00000365172 72 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
CTHRC1Q96CG8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 AC108676.2-201ENST00000605225 163 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 uc_338.36-201ENST00000622331 158 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 AC090617.8-201ENST00000623339 167 ntBASIC-0.13□□□□□ -2.43
CTHRC1Q96CG8 MIR655-201ENST00000362159 97 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR9-2-201ENST00000384838 87 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR664A-201ENST00000626086 82 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 snoR1.1-201ENST00000628177 80 ntBASIC-0.14□□□□□ -2.43
CTHRC1Q96CG8 MIR101-1-201ENST00000362265 75 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 MIR154-201ENST00000385243 84 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.15□□□□□ -2.43
CTHRC1Q96CG8 RNU6-411P-201ENST00000384451 107 ntBASIC-0.16□□□□□ -2.44
CTHRC1Q96CG8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MIRLET7B-201ENST00000385140 83 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP225-201ENST00000410874 135 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MTND4LP1-201ENST00000446263 157 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 MIR3134-201ENST00000579433 74 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.17□□□□□ -2.44
CTHRC1Q96CG8 SNORD95.1-201ENST00000364099 68 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 SNORD115-22-201ENST00000364456 82 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.18□□□□□ -2.44
CTHRC1Q96CG8 RNU6-587P-201ENST00000391282 106 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 AL445193.1-201ENST00000441183 141 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 RNA5SP67-201ENST00000516422 131 ntBASIC-0.19□□□□□ -2.44
CTHRC1Q96CG8 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 AL391099.1-201ENST00000624635 187 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 MIR4662A-201ENST00000637499 67 ntBASIC-0.2□□□□□ -2.44
CTHRC1Q96CG8 SNORD113.1-201ENST00000363280 73 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-895P-201ENST00000384125 103 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
CTHRC1Q96CG8 SNORD56B-201ENST00000384713 71 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms