Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC021146.9-201ENST00000512503 156 ntBASIC0.16□□□□□ -2.38
RTF1Q92541 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
RTF1Q92541 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
RTF1Q92541 RNA5SP225-201ENST00000410874 135 ntBASIC0.15□□□□□ -2.39
RTF1Q92541 CR383656.4-201ENST00000546909 122 ntBASIC0.15□□□□□ -2.39
RTF1Q92541 Y_RNA.633-201ENST00000459107 95 ntBASIC0.14□□□□□ -2.39
RTF1Q92541 U7.4-201ENST00000614961 63 ntBASIC0.14□□□□□ -2.39
RTF1Q92541 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.14□□□□□ -2.39
RTF1Q92541 RNU6-302P-201ENST00000365249 107 ntBASIC0.13□□□□□ -2.39
RTF1Q92541 RNU6-46P-201ENST00000383860 107 ntBASIC0.13□□□□□ -2.39
RTF1Q92541 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
RTF1Q92541 RNA5SP163-201ENST00000410304 99 ntBASIC0.13□□□□□ -2.39
RTF1Q92541 AC145423.2-201ENST00000610631 239 ntBASIC0.13□□□□□ -2.39
RTF1Q92541 MIR6514-201ENST00000622549 70 ntBASIC0.13□□□□□ -2.39
RTF1Q92541 MIR148A-201ENST00000362215 68 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 SNORD114-5-201ENST00000362928 70 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 RNA5SP331-201ENST00000364986 107 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 RNU6-1036P-201ENST00000383959 104 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 SNORA15B-2-201ENST00000384058 135 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 SNORA15B-1-201ENST00000384334 135 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 MIR145-201ENST00000384967 88 ntBASIC0.12□□□□□ -2.39
RTF1Q92541 SNORA49-201ENST00000386157 136 ntBASIC0.11□□□□□ -2.39
RTF1Q92541 SNORD57-201ENST00000448188 72 ntBASIC0.11□□□□□ -2.39
RTF1Q92541 RNA5SP147-201ENST00000516493 109 ntBASIC0.11□□□□□ -2.39
RTF1Q92541 MIR6739-201ENST00000622461 75 ntBASIC0.11□□□□□ -2.39
RTF1Q92541 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
RTF1Q92541 MIR604-201ENST00000384880 94 ntBASIC0.09□□□□□ -2.4
RTF1Q92541 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.4
RTF1Q92541 RNU6-70P-201ENST00000516438 60 ntBASIC0.09□□□□□ -2.4
RTF1Q92541 MIR8053-201ENST00000613344 75 ntBASIC0.09□□□□□ -2.4
RTF1Q92541 Y_RNA.788-201ENST00000622394 112 ntBASIC0.09□□□□□ -2.4
RTF1Q92541 SNORD45.1-201ENST00000363181 77 ntBASIC0.08□□□□□ -2.4
RTF1Q92541 RNU6-1162P-201ENST00000384443 104 ntBASIC0.08□□□□□ -2.4
RTF1Q92541 MIR521-2-201ENST00000384818 87 ntBASIC0.08□□□□□ -2.4
RTF1Q92541 snoU13.13-201ENST00000458842 104 ntBASIC0.08□□□□□ -2.4
RTF1Q92541 MIR3134-201ENST00000579433 74 ntBASIC0.07□□□□□ -2.4
RTF1Q92541 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
RTF1Q92541 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.07□□□□□ -2.4
RTF1Q92541 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
RTF1Q92541 SNORD115-25-201ENST00000362619 82 ntBASIC0.06□□□□□ -2.4
RTF1Q92541 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
RTF1Q92541 MIR664A-201ENST00000626086 82 ntBASIC0.06□□□□□ -2.4
RTF1Q92541 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 RNU6-411P-201ENST00000384451 107 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 RNU6-604P-201ENST00000390917 100 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 MIR4493-201ENST00000584016 73 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 AC108676.2-201ENST00000605225 163 ntBASIC0.05□□□□□ -2.4
RTF1Q92541 Y_RNA.244-201ENST00000364484 109 ntBASIC0.03□□□□□ -2.4
RTF1Q92541 RNU6-1241P-201ENST00000384536 107 ntBASIC0.03□□□□□ -2.4
RTF1Q92541 RNU6-587P-201ENST00000391282 106 ntBASIC0.03□□□□□ -2.4
RTF1Q92541 MIR4662A-201ENST00000637499 67 ntBASIC0.03□□□□□ -2.4
RTF1Q92541 MIR409-201ENST00000362237 79 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 SNORD115-22-201ENST00000364456 82 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 RNA5SP266-201ENST00000410273 108 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 Y_RNA.610-201ENST00000410681 103 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 AC104692.1-201ENST00000472406 90 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 U6.96-201ENST00000636425 70 ntBASIC0.02□□□□□ -2.41
RTF1Q92541 SNORA33.1-201ENST00000364957 130 ntBASIC0.01□□□□□ -2.41
RTF1Q92541 RNU6-638P-201ENST00000516582 104 ntBASIC0.01□□□□□ -2.41
RTF1Q92541 MIR6773-201ENST00000612812 74 ntBASIC0.01□□□□□ -2.41
RTF1Q92541 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
RTF1Q92541 RNU6-502P-201ENST00000362419 108 ntBASIC0□□□□□ -2.41
RTF1Q92541 RNU6-645P-201ENST00000364649 106 ntBASIC0□□□□□ -2.41
RTF1Q92541 MIR154-201ENST00000385243 84 ntBASIC0□□□□□ -2.41
RTF1Q92541 RNU6-687P-201ENST00000516443 89 ntBASIC0□□□□□ -2.41
RTF1Q92541 RNU6-656P-201ENST00000516785 107 ntBASIC0□□□□□ -2.41
RTF1Q92541 AP000676.1-201ENST00000533307 52 ntBASIC0□□□□□ -2.41
RTF1Q92541 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
RTF1Q92541 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.01□□□□□ -2.41
RTF1Q92541 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.01□□□□□ -2.41
RTF1Q92541 RPS29P8-201ENST00000445109 171 ntBASIC-0.02□□□□□ -2.41
RTF1Q92541 RNU6-776P-201ENST00000364403 104 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 RNU6-337P-201ENST00000391243 106 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 MIR4645-201ENST00000583158 77 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 MIR1295B-201ENST00000636144 60 ntBASIC-0.03□□□□□ -2.41
RTF1Q92541 SNORD113.1-201ENST00000363280 73 ntBASIC-0.04□□□□□ -2.42
RTF1Q92541 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.04□□□□□ -2.42
RTF1Q92541 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.04□□□□□ -2.42
RTF1Q92541 MIR101-1-201ENST00000362265 75 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 RNU6-900P-201ENST00000384498 102 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 SNORD45A-201ENST00000384512 84 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 MIRLET7B-201ENST00000385140 83 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 MIR214-201ENST00000385214 110 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 MTND4LP1-201ENST00000446263 157 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 RNU6-982P-201ENST00000516216 102 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 MIR8064-201ENST00000612863 90 ntBASIC-0.05□□□□□ -2.42
RTF1Q92541 SNORD49B-201ENST00000365172 72 ntBASIC-0.06□□□□□ -2.42
RTF1Q92541 MIR224-201ENST00000384889 81 ntBASIC-0.06□□□□□ -2.42
RTF1Q92541 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
RTF1Q92541 MIR1468-201ENST00000410600 86 ntBASIC-0.06□□□□□ -2.42
RTF1Q92541 RNU6-881P-201ENST00000516813 102 ntBASIC-0.06□□□□□ -2.42
RTF1Q92541 AC244250.2-201ENST00000418731 148 ntBASIC-0.07□□□□□ -2.42
RTF1Q92541 RNU6-523P-201ENST00000516304 54 ntBASIC-0.07□□□□□ -2.42
RTF1Q92541 CYP3A54P-201ENST00000566950 75 ntBASIC-0.07□□□□□ -2.42
RTF1Q92541 SNORD114-28-201ENST00000363610 72 ntBASIC-0.08□□□□□ -2.42
RTF1Q92541 SNORD95.1-201ENST00000364099 68 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms