Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
SMC1BQ8NDV3 MIR3657-201ENST00000584818 117 ntBASIC0.02□□□□□ -2.41
SMC1BQ8NDV3 SNORA2.1-201ENST00000363089 137 ntBASIC0.01□□□□□ -2.41
SMC1BQ8NDV3 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
SMC1BQ8NDV3 MIR4712-201ENST00000583750 82 ntBASIC0.01□□□□□ -2.41
SMC1BQ8NDV3 Y_RNA.250-201ENST00000364542 110 ntBASIC0□□□□□ -2.41
SMC1BQ8NDV3 Y_RNA.313-201ENST00000365095 103 ntBASIC0□□□□□ -2.41
SMC1BQ8NDV3 AC074348.1-201ENST00000426503 132 ntBASIC-0.01□□□□□ -2.41
SMC1BQ8NDV3 MIR4645-201ENST00000583158 77 ntBASIC-0.01□□□□□ -2.41
SMC1BQ8NDV3 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.02□□□□□ -2.41
SMC1BQ8NDV3 RNU6-573P-201ENST00000383938 106 ntBASIC-0.02□□□□□ -2.41
SMC1BQ8NDV3 RPS29P8-201ENST00000445109 171 ntBASIC-0.02□□□□□ -2.41
SMC1BQ8NDV3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.02□□□□□ -2.41
SMC1BQ8NDV3 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
SMC1BQ8NDV3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 MIR214-201ENST00000385214 110 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 MIR4484-201ENST00000582855 83 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 MIR3675-201ENST00000583661 73 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
SMC1BQ8NDV3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.04□□□□□ -2.42
SMC1BQ8NDV3 RNU6-787P-201ENST00000384032 107 ntBASIC-0.04□□□□□ -2.42
SMC1BQ8NDV3 SNORA8.1-201ENST00000384250 140 ntBASIC-0.04□□□□□ -2.42
SMC1BQ8NDV3 MIR1468-201ENST00000410600 86 ntBASIC-0.04□□□□□ -2.42
SMC1BQ8NDV3 SNORD49B-201ENST00000365172 72 ntBASIC-0.05□□□□□ -2.42
SMC1BQ8NDV3 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.05□□□□□ -2.42
SMC1BQ8NDV3 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.05□□□□□ -2.42
SMC1BQ8NDV3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.05□□□□□ -2.42
SMC1BQ8NDV3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
SMC1BQ8NDV3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SMC1BQ8NDV3 AP000676.1-201ENST00000533307 52 ntBASIC-0.06□□□□□ -2.42
SMC1BQ8NDV3 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
SMC1BQ8NDV3 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.07□□□□□ -2.42
SMC1BQ8NDV3 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.07□□□□□ -2.42
SMC1BQ8NDV3 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.07□□□□□ -2.42
SMC1BQ8NDV3 SNORA49-201ENST00000386157 136 ntBASIC-0.07□□□□□ -2.42
SMC1BQ8NDV3 snoU13.13-201ENST00000458842 104 ntBASIC-0.07□□□□□ -2.42
SMC1BQ8NDV3 SNORD57-201ENST00000448188 72 ntBASIC-0.08□□□□□ -2.42
SMC1BQ8NDV3 SNORA72.7-201ENST00000516349 94 ntBASIC-0.08□□□□□ -2.42
SMC1BQ8NDV3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.08□□□□□ -2.42
SMC1BQ8NDV3 RNU6-330P-201ENST00000363015 107 ntBASIC-0.09□□□□□ -2.42
SMC1BQ8NDV3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.09□□□□□ -2.42
SMC1BQ8NDV3 U6.96-201ENST00000636425 70 ntBASIC-0.09□□□□□ -2.42
SMC1BQ8NDV3 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.1□□□□□ -2.43
SMC1BQ8NDV3 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.1□□□□□ -2.43
SMC1BQ8NDV3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.11□□□□□ -2.43
SMC1BQ8NDV3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SMC1BQ8NDV3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.11□□□□□ -2.43
SMC1BQ8NDV3 MIR6507-201ENST00000613630 70 ntBASIC-0.11□□□□□ -2.43
SMC1BQ8NDV3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.12□□□□□ -2.43
SMC1BQ8NDV3 SNORD78.1-201ENST00000390866 65 ntBASIC-0.12□□□□□ -2.43
SMC1BQ8NDV3 RNU6-228P-201ENST00000362700 106 ntBASIC-0.13□□□□□ -2.43
SMC1BQ8NDV3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.14□□□□□ -2.43
SMC1BQ8NDV3 MIR521-2-201ENST00000384818 87 ntBASIC-0.14□□□□□ -2.43
SMC1BQ8NDV3 MIR224-201ENST00000384889 81 ntBASIC-0.14□□□□□ -2.43
SMC1BQ8NDV3 MIR6773-201ENST00000612812 74 ntBASIC-0.14□□□□□ -2.43
SMC1BQ8NDV3 MIR6739-201ENST00000622461 75 ntBASIC-0.14□□□□□ -2.43
SMC1BQ8NDV3 SNORD45.1-201ENST00000363181 77 ntBASIC-0.15□□□□□ -2.43
SMC1BQ8NDV3 MIR1255A-201ENST00000408338 113 ntBASIC-0.15□□□□□ -2.43
SMC1BQ8NDV3 AC145423.2-201ENST00000610631 239 ntBASIC-0.15□□□□□ -2.43
SMC1BQ8NDV3 AC244250.2-201ENST00000418731 148 ntBASIC-0.16□□□□□ -2.44
SMC1BQ8NDV3 MIR548AX-201ENST00000580117 73 ntBASIC-0.16□□□□□ -2.44
SMC1BQ8NDV3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.17□□□□□ -2.44
SMC1BQ8NDV3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
SMC1BQ8NDV3 SCARNA18B-201ENST00000458806 135 ntBASIC-0.17□□□□□ -2.44
SMC1BQ8NDV3 RNY1P9-201ENST00000532431 109 ntBASIC-0.17□□□□□ -2.44
SMC1BQ8NDV3 SNORA33.1-201ENST00000364957 130 ntBASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 RNU6-604P-201ENST00000390917 100 ntBASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 MIR8053-201ENST00000613344 75 ntBASIC-0.18□□□□□ -2.44
SMC1BQ8NDV3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
SMC1BQ8NDV3 RNU6-279P-201ENST00000391297 101 ntBASIC-0.19□□□□□ -2.44
SMC1BQ8NDV3 RNU6-70P-201ENST00000516438 60 ntBASIC-0.19□□□□□ -2.44
SMC1BQ8NDV3 RNU6-24P-201ENST00000384440 107 ntBASIC-0.2□□□□□ -2.44
SMC1BQ8NDV3 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
SMC1BQ8NDV3 U7.4-201ENST00000614961 63 ntBASIC-0.2□□□□□ -2.44
SMC1BQ8NDV3 RNU6-857P-201ENST00000515893 110 ntBASIC-0.21□□□□□ -2.44
SMC1BQ8NDV3 MIR9-2-201ENST00000384838 87 ntBASIC-0.22□□□□□ -2.44
SMC1BQ8NDV3 MIRLET7B-201ENST00000385140 83 ntBASIC-0.22□□□□□ -2.44
SMC1BQ8NDV3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.22□□□□□ -2.44
SMC1BQ8NDV3 snoR1.1-201ENST00000628177 80 ntBASIC-0.22□□□□□ -2.44
SMC1BQ8NDV3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.23□□□□□ -2.45
SMC1BQ8NDV3 RNU6-337P-201ENST00000391243 106 ntBASIC-0.23□□□□□ -2.45
SMC1BQ8NDV3 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
SMC1BQ8NDV3 RNU6-645P-201ENST00000364649 106 ntBASIC-0.24□□□□□ -2.45
SMC1BQ8NDV3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.24□□□□□ -2.45
SMC1BQ8NDV3 MIR664A-201ENST00000626086 82 ntBASIC-0.24□□□□□ -2.45
SMC1BQ8NDV3 MIR154-201ENST00000385243 84 ntBASIC-0.25□□□□□ -2.45
SMC1BQ8NDV3 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.25□□□□□ -2.45
SMC1BQ8NDV3 MIR3666-201ENST00000607845 111 ntBASIC-0.25□□□□□ -2.45
SMC1BQ8NDV3 MIR8064-201ENST00000612863 90 ntBASIC-0.25□□□□□ -2.45
SMC1BQ8NDV3 MIR655-201ENST00000362159 97 ntBASIC-0.26□□□□□ -2.45
SMC1BQ8NDV3 RNA5SP225-201ENST00000410874 135 ntBASIC-0.26□□□□□ -2.45
SMC1BQ8NDV3 RNU6-656P-201ENST00000516785 107 ntBASIC-0.26□□□□□ -2.45
SMC1BQ8NDV3 CYP3A54P-201ENST00000566950 75 ntBASIC-0.26□□□□□ -2.45
SMC1BQ8NDV3 RNU6-411P-201ENST00000384451 107 ntBASIC-0.27□□□□□ -2.45
SMC1BQ8NDV3 MTND4LP1-201ENST00000446263 157 ntBASIC-0.27□□□□□ -2.45
SMC1BQ8NDV3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 239.7 ms