Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 Y_RNA.379-201ENST00000365653 102 ntBASIC0.95□□□□□ -2.26
RETREG3Q86VR2 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
RETREG3Q86VR2 MIR3925-201ENST00000584674 77 ntBASIC0.94□□□□□ -2.26
RETREG3Q86VR2 Y_RNA.109-201ENST00000363215 102 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 MIR876-201ENST00000401147 81 ntBASIC0.92□□□□□ -2.26
RETREG3Q86VR2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.92□□□□□ -2.26
RETREG3Q86VR2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.92□□□□□ -2.26
RETREG3Q86VR2 SNORD1B-201ENST00000363091 84 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 SNORA40.16-201ENST00000517238 121 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 RNU6-458P-201ENST00000384179 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 AP000676.1-201ENST00000533307 52 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 U6.58-201ENST00000613107 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.89□□□□□ -2.27
RETREG3Q86VR2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 SNORD114-22-201ENST00000365423 72 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 AL353803.5-201ENST00000599815 141 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 SNORD44.1-201ENST00000363202 61 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU6-753P-201ENST00000363926 107 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU6-810P-201ENST00000364001 107 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 SNORA40B-201ENST00000385573 128 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU4-88P-201ENST00000411220 86 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
RETREG3Q86VR2 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 MIR106A-201ENST00000384870 81 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 snoU13.18-201ENST00000459483 104 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 snoR1.1-201ENST00000628177 80 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 MIR6734-201ENST00000621166 68 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 RNU6-980P-201ENST00000516925 103 ntBASIC0.83□□□□□ -2.28
RETREG3Q86VR2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RETREG3Q86VR2 SNORD115-23-201ENST00000364461 82 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 RNA5SP98-201ENST00000363158 137 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
RETREG3Q86VR2 RPS29P1-201ENST00000465274 159 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU4-33P-201ENST00000364316 85 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 AC108740.1-201ENST00000498629 225 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 SNORA68.3-201ENST00000515906 83 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR4432-201ENST00000581823 84 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR151B-201ENST00000584249 96 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 AC108676.2-201ENST00000605225 163 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 uc_338.17-201ENST00000619633 179 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 MIR548X-201ENST00000580069 75 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 RNU6-598P-201ENST00000364017 105 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 RNU6-127P-201ENST00000390897 107 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
RETREG3Q86VR2 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR579-201ENST00000385221 98 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR4490-201ENST00000582647 84 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 U2.18-201ENST00000622185 84 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.73□□□□□ -2.29
RETREG3Q86VR2 uc_338.36-201ENST00000622331 158 ntBASIC0.73□□□□□ -2.29
RETREG3Q86VR2 MIRLET7D-201ENST00000362263 87 ntBASIC0.72□□□□□ -2.29
RETREG3Q86VR2 RNU6-815P-201ENST00000384080 113 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 MIR643-201ENST00000385267 97 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 MIR6514-201ENST00000622549 70 ntBASIC0.7□□□□□ -2.3
RETREG3Q86VR2 AL391099.1-201ENST00000624635 187 ntBASIC0.7□□□□□ -2.3
RETREG3Q86VR2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
RETREG3Q86VR2 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU7-160P-201ENST00000516660 62 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU7-151P-201ENST00000516930 53 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 MIR7111-201ENST00000619751 72 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 Y_RNA.698-201ENST00000516798 118 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
RETREG3Q86VR2 SNORA62.4-201ENST00000365504 151 ntBASIC0.67□□□□□ -2.3
RETREG3Q86VR2 RNU6-696P-201ENST00000390834 107 ntBASIC0.67□□□□□ -2.3
RETREG3Q86VR2 RNU6-995P-201ENST00000391244 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms