Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 MIR6739-201ENST00000622461 75 ntBASIC-0.97□□□□□ -2.56
RPUSD3Q6P087 SNORD18.1-201ENST00000363807 70 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 MIR521-2-201ENST00000384818 87 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 AL078595.1-201ENST00000404458 226 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 RNU6-518P-201ENST00000516056 96 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 RNU6-62P-201ENST00000516526 102 ntBASIC-0.98□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 RNU6-813P-201ENST00000384691 107 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 MIR548H1-201ENST00000408610 102 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 RNU6-983P-201ENST00000516004 103 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 RNU6-656P-201ENST00000516785 107 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 MIR6509-201ENST00000614603 85 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 MIR3914-2-201ENST00000637339 95 ntBASIC-0.99□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.95-201ENST00000363079 95 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.175-201ENST00000363794 111 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 RNU6-563P-201ENST00000364872 108 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 MIR548A3-201ENST00000385297 97 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 SNORA18.5-201ENST00000516616 101 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 RNU6-400P-201ENST00000391173 106 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 RNU6-794P-201ENST00000517261 64 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 MIR4773-1-201ENST00000637203 78 ntBASIC-1.01□□□□□ -2.57
RPUSD3Q6P087 RNU6-258P-201ENST00000390884 101 ntBASIC-1.02□□□□□ -2.57
RPUSD3Q6P087 MIR548I1-201ENST00000408810 149 ntBASIC-1.02□□□□□ -2.57
RPUSD3Q6P087 RNU6-158P-201ENST00000517104 100 ntBASIC-1.02□□□□□ -2.57
RPUSD3Q6P087 MIR4777-201ENST00000583710 86 ntBASIC-1.02□□□□□ -2.57
RPUSD3Q6P087 MIR664B-201ENST00000626756 61 ntBASIC-1.02□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.03□□□□□ -2.57
RPUSD3Q6P087 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.03□□□□□ -2.57
RPUSD3Q6P087 RNU7-107P-201ENST00000459121 61 ntBASIC-1.03□□□□□ -2.57
RPUSD3Q6P087 AC103810.7-201ENST00000607821 91 ntBASIC-1.03□□□□□ -2.57
RPUSD3Q6P087 SNORD115-27-201ENST00000364430 82 ntBASIC-1.04□□□□□ -2.58
RPUSD3Q6P087 RNU6-630P-201ENST00000391258 106 ntBASIC-1.04□□□□□ -2.58
RPUSD3Q6P087 RNU6-971P-201ENST00000516920 106 ntBASIC-1.04□□□□□ -2.58
RPUSD3Q6P087 AC006254.2-201ENST00000603259 279 ntBASIC-1.04□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 RNU6-598P-201ENST00000364017 105 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 SNX3P1X-201ENST00000414887 175 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 MIR3123-201ENST00000583417 75 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 AC090425.1-201ENST00000610007 140 ntBASIC-1.05□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 RNU6-519P-201ENST00000410590 108 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 AC018880.2-201ENST00000414265 201 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 AL021921.1-201ENST00000442774 93 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 RNU7-174P-201ENST00000516248 59 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 MIR4490-201ENST00000582647 84 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.06□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 RNU6-458P-201ENST00000384179 107 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 RNU6-695P-201ENST00000391157 104 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 U6.58-201ENST00000613107 107 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 AC012531.4-201ENST00000616509 177 ntBASIC-1.07□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 SNORD115-31-201ENST00000365318 82 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 RNU6-587P-201ENST00000391282 106 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 AL691482.2-201ENST00000457453 84 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 AC005520.4-201ENST00000604337 90 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 U4.4-201ENST00000620626 117 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 U2.18-201ENST00000622185 84 ntBASIC-1.08□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 RNU6-841P-201ENST00000383872 107 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 RNU6-696P-201ENST00000390834 107 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 MIR1285-2-201ENST00000408311 88 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 RNU6-346P-201ENST00000516288 111 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 RNU6-795P-201ENST00000516323 103 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 AC120024.2-201ENST00000576526 175 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 MIR548AM-201ENST00000584298 74 ntBASIC-1.09□□□□□ -2.58
RPUSD3Q6P087 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 AL035461.1-201ENST00000421490 332 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 SNORD33.1-201ENST00000516213 88 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 RNU7-153P-201ENST00000516455 62 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 MIR548W-201ENST00000581970 74 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 AC013734.1-201ENST00000619329 111 ntBASIC-1.1□□□□□ -2.59
RPUSD3Q6P087 RNU6-340P-201ENST00000364005 107 ntBASIC-1.11□□□□□ -2.59
RPUSD3Q6P087 RNU6-907P-201ENST00000390924 102 ntBASIC-1.11□□□□□ -2.59
RPUSD3Q6P087 RNU4-88P-201ENST00000411220 86 ntBASIC-1.11□□□□□ -2.59
RPUSD3Q6P087 MTATP6P29-201ENST00000415057 132 ntBASIC-1.11□□□□□ -2.59
RPUSD3Q6P087 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.11□□□□□ -2.59
RPUSD3Q6P087 RNU6-807P-201ENST00000516805 107 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms