Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MIR5588-201ENST00000581890 63 ntBASIC-0.44□□□□□ -2.48
CCDC144BQ3MJ40 SNORD95.1-201ENST00000364099 68 ntBASIC-0.45□□□□□ -2.48
CCDC144BQ3MJ40 MIR9-2-201ENST00000384838 87 ntBASIC-0.45□□□□□ -2.48
CCDC144BQ3MJ40 AC145423.2-201ENST00000610631 239 ntBASIC-0.45□□□□□ -2.48
CCDC144BQ3MJ40 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
CCDC144BQ3MJ40 MIR203A-201ENST00000384836 110 ntBASIC-0.46□□□□□ -2.48
CCDC144BQ3MJ40 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.46□□□□□ -2.48
CCDC144BQ3MJ40 RNU6-502P-201ENST00000362419 108 ntBASIC-0.47□□□□□ -2.48
CCDC144BQ3MJ40 SNORD114-11-201ENST00000363738 75 ntBASIC-0.47□□□□□ -2.48
CCDC144BQ3MJ40 RNU6-303P-201ENST00000517091 106 ntBASIC-0.47□□□□□ -2.48
CCDC144BQ3MJ40 RNA5SP170-201ENST00000517150 101 ntBASIC-0.47□□□□□ -2.48
CCDC144BQ3MJ40 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
CCDC144BQ3MJ40 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
CCDC144BQ3MJ40 U6.96-201ENST00000636425 70 ntBASIC-0.48□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-979P-201ENST00000383896 107 ntBASIC-0.49□□□□□ -2.49
CCDC144BQ3MJ40 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
CCDC144BQ3MJ40 AL445193.1-201ENST00000441183 141 ntBASIC-0.49□□□□□ -2.49
CCDC144BQ3MJ40 RNU7-55P-201ENST00000459426 62 ntBASIC-0.49□□□□□ -2.49
CCDC144BQ3MJ40 MIR6773-201ENST00000612812 74 ntBASIC-0.49□□□□□ -2.49
CCDC144BQ3MJ40 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.5□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-242P-201ENST00000384359 107 ntBASIC-0.5□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-901P-201ENST00000384593 106 ntBASIC-0.5□□□□□ -2.49
CCDC144BQ3MJ40 snoU13.13-201ENST00000458842 104 ntBASIC-0.5□□□□□ -2.49
CCDC144BQ3MJ40 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.5□□□□□ -2.49
CCDC144BQ3MJ40 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.51□□□□□ -2.49
CCDC144BQ3MJ40 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
CCDC144BQ3MJ40 RNA5SP66-201ENST00000517178 101 ntBASIC-0.51□□□□□ -2.49
CCDC144BQ3MJ40 MIR1297-201ENST00000637311 77 ntBASIC-0.51□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-820P-201ENST00000384273 107 ntBASIC-0.52□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.52□□□□□ -2.49
CCDC144BQ3MJ40 RNA5SP147-201ENST00000516493 109 ntBASIC-0.52□□□□□ -2.49
CCDC144BQ3MJ40 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.52□□□□□ -2.49
CCDC144BQ3MJ40 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 SNORD56B-201ENST00000384713 71 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 RNU7-171P-201ENST00000459581 62 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-807P-201ENST00000516805 107 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 uc_338.36-201ENST00000622331 158 ntBASIC-0.53□□□□□ -2.49
CCDC144BQ3MJ40 RNU6-315P-201ENST00000362666 107 ntBASIC-0.54□□□□□ -2.5
CCDC144BQ3MJ40 RNU4-63P-201ENST00000411313 118 ntBASIC-0.54□□□□□ -2.5
CCDC144BQ3MJ40 SNORD57-201ENST00000448188 72 ntBASIC-0.54□□□□□ -2.5
CCDC144BQ3MJ40 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.54□□□□□ -2.5
CCDC144BQ3MJ40 RNU6-478P-201ENST00000363904 110 ntBASIC-0.55□□□□□ -2.5
CCDC144BQ3MJ40 RNU6-973P-201ENST00000364690 107 ntBASIC-0.55□□□□□ -2.5
CCDC144BQ3MJ40 AC022137.1-201ENST00000483735 151 ntBASIC-0.55□□□□□ -2.5
CCDC144BQ3MJ40 snoR1.1-201ENST00000628177 80 ntBASIC-0.55□□□□□ -2.5
CCDC144BQ3MJ40 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
CCDC144BQ3MJ40 AC114755.3-201ENST00000481111 251 ntBASIC-0.56□□□□□ -2.5
CCDC144BQ3MJ40 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
CCDC144BQ3MJ40 MIR494-201ENST00000349529 81 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 MIR409-201ENST00000362237 79 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 MIR521-2-201ENST00000384818 87 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 MIRLET7B-201ENST00000385140 83 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 MIR4432-201ENST00000581823 84 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 AC093726.3-201ENST00000637588 150 ntBASIC-0.57□□□□□ -2.5
CCDC144BQ3MJ40 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.58□□□□□ -2.5
CCDC144BQ3MJ40 MIR3681-201ENST00000580089 72 ntBASIC-0.58□□□□□ -2.5
CCDC144BQ3MJ40 MIR3675-201ENST00000583661 73 ntBASIC-0.58□□□□□ -2.5
CCDC144BQ3MJ40 MIR6739-201ENST00000622461 75 ntBASIC-0.58□□□□□ -2.5
CCDC144BQ3MJ40 AL391099.1-201ENST00000624635 187 ntBASIC-0.58□□□□□ -2.5
CCDC144BQ3MJ40 RNU6-337P-201ENST00000391243 106 ntBASIC-0.59□□□□□ -2.5
CCDC144BQ3MJ40 AC074348.1-201ENST00000426503 132 ntBASIC-0.59□□□□□ -2.5
CCDC144BQ3MJ40 RNA5SP169-201ENST00000517268 117 ntBASIC-0.59□□□□□ -2.5
CCDC144BQ3MJ40 RNA5SP331-201ENST00000364986 107 ntBASIC-0.6□□□□□ -2.51
CCDC144BQ3MJ40 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.6□□□□□ -2.51
CCDC144BQ3MJ40 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
CCDC144BQ3MJ40 MIR4280-201ENST00000582178 76 ntBASIC-0.6□□□□□ -2.51
CCDC144BQ3MJ40 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.61□□□□□ -2.51
CCDC144BQ3MJ40 SNORD38.3-201ENST00000516599 73 ntBASIC-0.61□□□□□ -2.51
CCDC144BQ3MJ40 MIR5704-201ENST00000584029 77 ntBASIC-0.61□□□□□ -2.51
CCDC144BQ3MJ40 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.62□□□□□ -2.51
CCDC144BQ3MJ40 RNA5SP266-201ENST00000410273 108 ntBASIC-0.62□□□□□ -2.51
CCDC144BQ3MJ40 SNORA33.1-201ENST00000364957 130 ntBASIC-0.63□□□□□ -2.51
CCDC144BQ3MJ40 MIR548AX-201ENST00000580117 73 ntBASIC-0.63□□□□□ -2.51
CCDC144BQ3MJ40 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
CCDC144BQ3MJ40 RNA5SP470-201ENST00000516463 106 ntBASIC-0.64□□□□□ -2.51
CCDC144BQ3MJ40 MIR6851-201ENST00000617060 67 ntBASIC-0.64□□□□□ -2.51
CCDC144BQ3MJ40 SNORA8.1-201ENST00000384250 140 ntBASIC-0.65□□□□□ -2.51
CCDC144BQ3MJ40 MIR1245B-201ENST00000636115 69 ntBASIC-0.65□□□□□ -2.51
CCDC144BQ3MJ40 RNY1P9-201ENST00000532431 109 ntBASIC-0.66□□□□□ -2.52
CCDC144BQ3MJ40 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.67□□□□□ -2.52
CCDC144BQ3MJ40 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.68□□□□□ -2.52
CCDC144BQ3MJ40 SNORD115-23-201ENST00000364461 82 ntBASIC-0.68□□□□□ -2.52
CCDC144BQ3MJ40 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
CCDC144BQ3MJ40 MIR8068-201ENST00000618032 68 ntBASIC-0.68□□□□□ -2.52
CCDC144BQ3MJ40 CYP3A54P-201ENST00000566950 75 ntBASIC-0.69□□□□□ -2.52
CCDC144BQ3MJ40 MIR4666B-201ENST00000578142 81 ntBASIC-0.69□□□□□ -2.52
CCDC144BQ3MJ40 AC090617.8-201ENST00000623339 167 ntBASIC-0.69□□□□□ -2.52
CCDC144BQ3MJ40 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.7□□□□□ -2.52
CCDC144BQ3MJ40 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.7□□□□□ -2.52
CCDC144BQ3MJ40 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
CCDC144BQ3MJ40 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.7□□□□□ -2.52
CCDC144BQ3MJ40 MIR6854-201ENST00000614935 69 ntBASIC-0.7□□□□□ -2.52
CCDC144BQ3MJ40 SNORA13-201ENST00000458790 133 ntBASIC-0.71□□□□□ -2.52
CCDC144BQ3MJ40 MIR4436A-201ENST00000585278 85 ntBASIC-0.71□□□□□ -2.52
CCDC144BQ3MJ40 RNU6-330P-201ENST00000363015 107 ntBASIC-0.72□□□□□ -2.52
CCDC144BQ3MJ40 MT-TQ-201ENST00000387372 72 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms