Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORD114-29-201ENST00000364819 70 ntBASIC0.72□□□□□ -2.29
YBX1P67809 RNU6-34P-201ENST00000364874 107 ntBASIC0.72□□□□□ -2.29
YBX1P67809 RNU6-1079P-201ENST00000362861 110 ntBASIC0.71□□□□□ -2.3
YBX1P67809 SNORA75.1-201ENST00000391130 148 ntBASIC0.71□□□□□ -2.3
YBX1P67809 RNU7-188P-201ENST00000517063 64 ntBASIC0.71□□□□□ -2.3
YBX1P67809 RNU6-35P-201ENST00000384530 107 ntBASIC0.7□□□□□ -2.3
YBX1P67809 MIR760-201ENST00000390220 80 ntBASIC0.7□□□□□ -2.3
YBX1P67809 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
YBX1P67809 MIR6755-201ENST00000619993 66 ntBASIC0.7□□□□□ -2.3
YBX1P67809 AC079150.2-201ENST00000443733 78 ntBASIC0.69□□□□□ -2.3
YBX1P67809 SNORD2-201ENST00000459163 69 ntBASIC0.69□□□□□ -2.3
YBX1P67809 RNU6-122P-201ENST00000516818 107 ntBASIC0.69□□□□□ -2.3
YBX1P67809 MIR4711-201ENST00000578274 70 ntBASIC0.69□□□□□ -2.3
YBX1P67809 MIR4677-201ENST00000584153 80 ntBASIC0.69□□□□□ -2.3
YBX1P67809 AC084368.1-201ENST00000620935 65 ntBASIC0.69□□□□□ -2.3
YBX1P67809 SNORD60.1-201ENST00000362451 73 ntBASIC0.68□□□□□ -2.3
YBX1P67809 U4.4-201ENST00000620626 117 ntBASIC0.68□□□□□ -2.3
YBX1P67809 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
YBX1P67809 AC090617.8-201ENST00000623339 167 ntBASIC0.68□□□□□ -2.3
YBX1P67809 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
YBX1P67809 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
YBX1P67809 Y_RNA.246-201ENST00000364495 108 ntBASIC0.67□□□□□ -2.3
YBX1P67809 MIR501-201ENST00000390204 84 ntBASIC0.67□□□□□ -2.3
YBX1P67809 MIR1255B2-201ENST00000408618 67 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU6-848P-201ENST00000515948 107 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU7-129P-201ENST00000516128 62 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU6-617P-201ENST00000516147 107 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU6-473P-201ENST00000516164 107 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU6-1049P-201ENST00000516414 107 ntBASIC0.67□□□□□ -2.3
YBX1P67809 RNU6-614P-201ENST00000384369 107 ntBASIC0.66□□□□□ -2.3
YBX1P67809 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
YBX1P67809 MIR1197-201ENST00000408818 88 ntBASIC0.66□□□□□ -2.3
YBX1P67809 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
YBX1P67809 AL021921.1-201ENST00000442774 93 ntBASIC0.66□□□□□ -2.3
YBX1P67809 RNU6-518P-201ENST00000516056 96 ntBASIC0.66□□□□□ -2.3
YBX1P67809 U6.59-201ENST00000615686 107 ntBASIC0.66□□□□□ -2.3
YBX1P67809 RNU6-829P-201ENST00000363700 112 ntBASIC0.65□□□□□ -2.31
YBX1P67809 RNU6-987P-201ENST00000384759 104 ntBASIC0.65□□□□□ -2.31
YBX1P67809 RNU4-37P-201ENST00000410214 84 ntBASIC0.65□□□□□ -2.31
YBX1P67809 MIR3938-201ENST00000582157 103 ntBASIC0.65□□□□□ -2.31
YBX1P67809 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
YBX1P67809 SNORA9.1-201ENST00000362412 131 ntBASIC0.64□□□□□ -2.31
YBX1P67809 Y_RNA.325-201ENST00000365171 122 ntBASIC0.64□□□□□ -2.31
YBX1P67809 RNA5SP128-201ENST00000365305 116 ntBASIC0.64□□□□□ -2.31
YBX1P67809 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
YBX1P67809 RNU6-175P-201ENST00000516896 107 ntBASIC0.64□□□□□ -2.31
YBX1P67809 MIR548AD-201ENST00000584780 82 ntBASIC0.64□□□□□ -2.31
YBX1P67809 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
YBX1P67809 RNU6-1036P-201ENST00000383959 104 ntBASIC0.63□□□□□ -2.31
YBX1P67809 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
YBX1P67809 MIR6086-201ENST00000638065 55 ntBASIC0.63□□□□□ -2.31
YBX1P67809 SNORA49-201ENST00000386157 136 ntBASIC0.62□□□□□ -2.31
YBX1P67809 RNU6-1246P-201ENST00000391064 107 ntBASIC0.62□□□□□ -2.31
YBX1P67809 MIR6773-201ENST00000612812 74 ntBASIC0.62□□□□□ -2.31
YBX1P67809 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
YBX1P67809 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
YBX1P67809 MIR519A2-201ENST00000384990 87 ntBASIC0.61□□□□□ -2.31
YBX1P67809 RNU6-337P-201ENST00000391243 106 ntBASIC0.61□□□□□ -2.31
YBX1P67809 RNU6-863P-201ENST00000515989 104 ntBASIC0.61□□□□□ -2.31
YBX1P67809 MIR3925-201ENST00000584674 77 ntBASIC0.6□□□□□ -2.31
YBX1P67809 RN7SL660P-201ENST00000614852 299 ntBASIC0.6□□□□□ -2.31
YBX1P67809 Y_RNA.236-201ENST00000364427 111 ntBASIC0.59□□□□□ -2.31
YBX1P67809 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
YBX1P67809 SNORA41B-201ENST00000384785 128 ntBASIC0.58□□□□□ -2.32
YBX1P67809 RNU6-446P-201ENST00000362827 106 ntBASIC0.57□□□□□ -2.32
YBX1P67809 Y_RNA.74-201ENST00000362911 99 ntBASIC0.57□□□□□ -2.32
YBX1P67809 MIR527-201ENST00000385244 85 ntBASIC0.57□□□□□ -2.32
YBX1P67809 SCARNA11.2-201ENST00000517183 154 ntBASIC0.57□□□□□ -2.32
YBX1P67809 SNORD115-25-201ENST00000362619 82 ntBASIC0.56□□□□□ -2.32
YBX1P67809 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
YBX1P67809 RNA5SP285-201ENST00000516619 119 ntBASIC0.56□□□□□ -2.32
YBX1P67809 RNU6-782P-201ENST00000516852 104 ntBASIC0.56□□□□□ -2.32
YBX1P67809 MIR103A1-201ENST00000362165 78 ntBASIC0.55□□□□□ -2.32
YBX1P67809 RNU6-502P-201ENST00000362419 108 ntBASIC0.55□□□□□ -2.32
YBX1P67809 MIRLET7B-201ENST00000385140 83 ntBASIC0.55□□□□□ -2.32
YBX1P67809 MIR876-201ENST00000401147 81 ntBASIC0.55□□□□□ -2.32
YBX1P67809 RNA5SP470-201ENST00000516463 106 ntBASIC0.55□□□□□ -2.32
YBX1P67809 MIR2909-201ENST00000617113 69 ntBASIC0.55□□□□□ -2.32
YBX1P67809 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
YBX1P67809 AP000676.1-201ENST00000533307 52 ntBASIC0.54□□□□□ -2.32
YBX1P67809 AL627230.5-201ENST00000619807 58 ntBASIC0.54□□□□□ -2.32
YBX1P67809 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
YBX1P67809 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
YBX1P67809 Y_RNA.282-201ENST00000364793 102 ntBASIC0.52□□□□□ -2.33
YBX1P67809 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.52□□□□□ -2.33
YBX1P67809 RNU7-154P-201ENST00000516194 62 ntBASIC0.52□□□□□ -2.33
YBX1P67809 RNU6-141P-201ENST00000410499 105 ntBASIC0.51□□□□□ -2.33
YBX1P67809 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.51□□□□□ -2.33
YBX1P67809 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
YBX1P67809 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
YBX1P67809 RNU6-815P-201ENST00000384080 113 ntBASIC0.5□□□□□ -2.33
YBX1P67809 SNORD116-16-201ENST00000384533 92 ntBASIC0.5□□□□□ -2.33
YBX1P67809 RNU6-127P-201ENST00000390897 107 ntBASIC0.5□□□□□ -2.33
YBX1P67809 RNA5SP63-201ENST00000391225 112 ntBASIC0.5□□□□□ -2.33
YBX1P67809 MIR548AG1-201ENST00000579932 66 ntBASIC0.5□□□□□ -2.33
YBX1P67809 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
YBX1P67809 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
YBX1P67809 RNU6-520P-201ENST00000384717 104 ntBASIC0.49□□□□□ -2.33
YBX1P67809 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.49□□□□□ -2.33
YBX1P67809 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms