Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL445584.3-201ENST00000617173 78 ntBASIC-0.98□□□□□ -2.57
LIM2P55344 SNORD115-27-201ENST00000364430 82 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
LIM2P55344 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 SNORD77.2-201ENST00000391045 68 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 MIR6888-201ENST00000621977 67 ntBASIC-0.99□□□□□ -2.57
LIM2P55344 RNU6-633P-201ENST00000362612 103 ntBASIC-1□□□□□ -2.57
LIM2P55344 RNY1P7-201ENST00000384743 110 ntBASIC-1□□□□□ -2.57
LIM2P55344 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
LIM2P55344 AL031737.1-201ENST00000450125 223 ntBASIC-1□□□□□ -2.57
LIM2P55344 SNORD114-25-201ENST00000363742 72 ntBASIC-1.01□□□□□ -2.57
LIM2P55344 SNORD57-201ENST00000448188 72 ntBASIC-1.01□□□□□ -2.57
LIM2P55344 RNU7-154P-201ENST00000516194 62 ntBASIC-1.01□□□□□ -2.57
LIM2P55344 RNU6-313P-201ENST00000516317 112 ntBASIC-1.01□□□□□ -2.57
LIM2P55344 SNORD115-37-201ENST00000363768 82 ntBASIC-1.02□□□□□ -2.57
LIM2P55344 MIR196A1-201ENST00000388006 70 ntBASIC-1.02□□□□□ -2.57
LIM2P55344 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.02□□□□□ -2.57
LIM2P55344 AC132825.6-201ENST00000638861 357 ntBASIC-1.02□□□□□ -2.57
LIM2P55344 MIR409-201ENST00000362237 79 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 RNU6-924P-201ENST00000362926 108 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 RNU6-431P-201ENST00000383874 107 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 RNY1P9-201ENST00000532431 109 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 MIR4668-201ENST00000582284 70 ntBASIC-1.03□□□□□ -2.57
LIM2P55344 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.03□□□□□ -2.57
LIM2P55344 RNU6-624P-201ENST00000363411 107 ntBASIC-1.04□□□□□ -2.58
LIM2P55344 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.04□□□□□ -2.58
LIM2P55344 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.05□□□□□ -2.58
LIM2P55344 SNORD114-17-201ENST00000364699 75 ntBASIC-1.05□□□□□ -2.58
LIM2P55344 SNORD64-201ENST00000386683 67 ntBASIC-1.05□□□□□ -2.58
LIM2P55344 AC093729.1-201ENST00000513074 128 ntBASIC-1.05□□□□□ -2.58
LIM2P55344 MIR3910-1-201ENST00000580936 111 ntBASIC-1.05□□□□□ -2.58
LIM2P55344 RNY4P18-201ENST00000391107 89 ntBASIC-1.06□□□□□ -2.58
LIM2P55344 RNU2-51P-201ENST00000410708 197 ntBASIC-1.06□□□□□ -2.58
LIM2P55344 AL035461.1-201ENST00000421490 332 ntBASIC-1.06□□□□□ -2.58
LIM2P55344 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.06□□□□□ -2.58
LIM2P55344 SNORD113-1-201ENST00000365321 69 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 SNORD116-22-201ENST00000384430 92 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 MIR519A2-201ENST00000384990 87 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 AL021921.1-201ENST00000442774 93 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 SNORA40.13-201ENST00000516379 120 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 AP001318.4-201ENST00000616637 121 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 AL627230.5-201ENST00000619807 58 ntBASIC-1.07□□□□□ -2.58
LIM2P55344 MIR450A1-201ENST00000362262 91 ntBASIC-1.08□□□□□ -2.58
LIM2P55344 SNORD83B-201ENST00000386745 93 ntBASIC-1.08□□□□□ -2.58
LIM2P55344 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.08□□□□□ -2.58
LIM2P55344 RNU6-755P-201ENST00000364400 103 ntBASIC-1.09□□□□□ -2.58
LIM2P55344 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.09□□□□□ -2.58
LIM2P55344 RNU6-518P-201ENST00000516056 96 ntBASIC-1.09□□□□□ -2.58
LIM2P55344 MALAT1.1-201ENST00000618249 95 ntBASIC-1.09□□□□□ -2.58
LIM2P55344 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
LIM2P55344 RNU6-497P-201ENST00000365316 104 ntBASIC-1.1□□□□□ -2.59
LIM2P55344 AL500527.2-201ENST00000454105 95 ntBASIC-1.1□□□□□ -2.59
LIM2P55344 RNU6-656P-201ENST00000516785 107 ntBASIC-1.1□□□□□ -2.59
LIM2P55344 RNU6-557P-201ENST00000516842 110 ntBASIC-1.1□□□□□ -2.59
LIM2P55344 AC140658.3-201ENST00000567603 271 ntBASIC-1.1□□□□□ -2.59
LIM2P55344 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.11□□□□□ -2.59
LIM2P55344 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.11□□□□□ -2.59
LIM2P55344 SNORD115-33-201ENST00000363723 82 ntBASIC-1.12□□□□□ -2.59
LIM2P55344 RNU6-219P-201ENST00000364728 107 ntBASIC-1.12□□□□□ -2.59
LIM2P55344 RNA5SP266-201ENST00000410273 108 ntBASIC-1.12□□□□□ -2.59
LIM2P55344 SNORA26.4-201ENST00000391188 123 ntBASIC-1.13□□□□□ -2.59
LIM2P55344 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.13□□□□□ -2.59
LIM2P55344 snoU83B.1-201ENST00000517136 88 ntBASIC-1.13□□□□□ -2.59
LIM2P55344 MIR587-201ENST00000384845 96 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 RNU6-807P-201ENST00000516805 107 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 RNU6-303P-201ENST00000517091 106 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.14□□□□□ -2.59
LIM2P55344 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 RNU6-402P-201ENST00000410678 103 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 SCARNA17-201ENST00000516183 144 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 U2.7-201ENST00000619197 100 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 MIR6738-201ENST00000619620 64 ntBASIC-1.15□□□□□ -2.59
LIM2P55344 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.16□□□□□ -2.6
LIM2P55344 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.16□□□□□ -2.6
LIM2P55344 MIR548BB-201ENST00000626714 66 ntBASIC-1.16□□□□□ -2.6
LIM2P55344 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 RNU6-645P-201ENST00000364649 106 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 RNU6-686P-201ENST00000364839 107 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 RNA5SP331-201ENST00000364986 107 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 SNORD63.1-201ENST00000516178 80 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 MIR3675-201ENST00000583661 73 ntBASIC-1.17□□□□□ -2.6
LIM2P55344 RNU6-32P-201ENST00000383948 107 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 RNU6-13P-201ENST00000384248 107 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 RNU6-12P-201ENST00000384604 107 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 RNU6-41P-201ENST00000384741 107 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 AC074348.1-201ENST00000426503 132 ntBASIC-1.18□□□□□ -2.6
LIM2P55344 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.19□□□□□ -2.6
LIM2P55344 RNU6-267P-201ENST00000516714 103 ntBASIC-1.19□□□□□ -2.6
LIM2P55344 MIR4324-201ENST00000584846 72 ntBASIC-1.19□□□□□ -2.6
LIM2P55344 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms