Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 RNU6-518P-201ENST00000516056 96 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 RNU6-1232P-201ENST00000516299 86 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 MIR548AD-201ENST00000584780 82 ntBASIC0.72□□□□□ -2.29
EPHB3P54753 RNA5SP325-201ENST00000363756 130 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 SNORA41B-201ENST00000384785 128 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 RNU6-1246P-201ENST00000391064 107 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 RNU6-337P-201ENST00000391243 106 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 MIR6773-201ENST00000612812 74 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
EPHB3P54753 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
EPHB3P54753 SNORD113-4-201ENST00000364802 75 ntBASIC0.7□□□□□ -2.3
EPHB3P54753 MIR1255B2-201ENST00000408618 67 ntBASIC0.7□□□□□ -2.3
EPHB3P54753 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
EPHB3P54753 SNORA9.1-201ENST00000362412 131 ntBASIC0.69□□□□□ -2.3
EPHB3P54753 Y_RNA.74-201ENST00000362911 99 ntBASIC0.69□□□□□ -2.3
EPHB3P54753 RNU6-520P-201ENST00000384717 104 ntBASIC0.69□□□□□ -2.3
EPHB3P54753 MIR216A-201ENST00000385063 110 ntBASIC0.69□□□□□ -2.3
EPHB3P54753 RNU6-863P-201ENST00000515989 104 ntBASIC0.69□□□□□ -2.3
EPHB3P54753 MIR519A2-201ENST00000384990 87 ntBASIC0.68□□□□□ -2.3
EPHB3P54753 MIR760-201ENST00000390220 80 ntBASIC0.68□□□□□ -2.3
EPHB3P54753 RNU7-154P-201ENST00000516194 62 ntBASIC0.68□□□□□ -2.3
EPHB3P54753 RN7SL793P-201ENST00000583259 296 ntBASIC0.68□□□□□ -2.3
EPHB3P54753 RNA5SP128-201ENST00000365305 116 ntBASIC0.67□□□□□ -2.3
EPHB3P54753 SNORD116-16-201ENST00000384533 92 ntBASIC0.67□□□□□ -2.3
EPHB3P54753 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
EPHB3P54753 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
EPHB3P54753 MIRLET7B-201ENST00000385140 83 ntBASIC0.66□□□□□ -2.3
EPHB3P54753 MIR876-201ENST00000401147 81 ntBASIC0.66□□□□□ -2.3
EPHB3P54753 AC084368.1-201ENST00000620935 65 ntBASIC0.66□□□□□ -2.3
EPHB3P54753 RNU6-502P-201ENST00000362419 108 ntBASIC0.65□□□□□ -2.31
EPHB3P54753 Y_RNA.282-201ENST00000364793 102 ntBASIC0.65□□□□□ -2.31
EPHB3P54753 RNA5SP470-201ENST00000516463 106 ntBASIC0.65□□□□□ -2.31
EPHB3P54753 MIR7978-201ENST00000636158 59 ntBASIC0.65□□□□□ -2.31
EPHB3P54753 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
EPHB3P54753 SNORD115-25-201ENST00000362619 82 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 RNU6-1036P-201ENST00000383959 104 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 MIR936-201ENST00000401264 98 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 RNU7-119P-201ENST00000459279 63 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 Y_RNA.722-201ENST00000517279 114 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 MIR3925-201ENST00000584674 77 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 RN7SL660P-201ENST00000614852 299 ntBASIC0.64□□□□□ -2.31
EPHB3P54753 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
EPHB3P54753 RNU6-231P-201ENST00000517122 103 ntBASIC0.63□□□□□ -2.31
EPHB3P54753 RNU6-808P-201ENST00000391233 108 ntBASIC0.62□□□□□ -2.31
EPHB3P54753 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
EPHB3P54753 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
EPHB3P54753 RNU6-1184P-201ENST00000384588 108 ntBASIC0.61□□□□□ -2.31
EPHB3P54753 MIR106A-201ENST00000384870 81 ntBASIC0.61□□□□□ -2.31
EPHB3P54753 MIR527-201ENST00000385244 85 ntBASIC0.61□□□□□ -2.31
EPHB3P54753 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.6□□□□□ -2.31
EPHB3P54753 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
EPHB3P54753 RNU6-782P-201ENST00000516852 104 ntBASIC0.6□□□□□ -2.31
EPHB3P54753 MIR548AG1-201ENST00000579932 66 ntBASIC0.6□□□□□ -2.31
EPHB3P54753 RNU6-1312P-201ENST00000362425 108 ntBASIC0.59□□□□□ -2.31
EPHB3P54753 RNU6-936P-201ENST00000384005 107 ntBASIC0.59□□□□□ -2.31
EPHB3P54753 MIR499B-201ENST00000636498 73 ntBASIC0.59□□□□□ -2.31
EPHB3P54753 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
EPHB3P54753 RNU6-246P-201ENST00000384702 107 ntBASIC0.58□□□□□ -2.32
EPHB3P54753 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
EPHB3P54753 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 SNORD115-23-201ENST00000364461 82 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 MIR193B-201ENST00000384907 83 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 RNU7-129P-201ENST00000516128 62 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
EPHB3P54753 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
EPHB3P54753 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
EPHB3P54753 MIR429-201ENST00000362106 83 ntBASIC0.55□□□□□ -2.32
EPHB3P54753 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
EPHB3P54753 SCARNA11.2-201ENST00000517183 154 ntBASIC0.55□□□□□ -2.32
EPHB3P54753 MIR7110-201ENST00000612638 86 ntBASIC0.55□□□□□ -2.32
EPHB3P54753 SNORA40.16-201ENST00000517238 121 ntBASIC0.54□□□□□ -2.32
EPHB3P54753 SNORD1B-201ENST00000363091 84 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 Y_RNA.109-201ENST00000363215 102 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 MIR1273G-201ENST00000577677 100 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 AL353803.5-201ENST00000599815 141 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
EPHB3P54753 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
EPHB3P54753 MIR103A1-201ENST00000362165 78 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 RNU6-458P-201ENST00000384179 107 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 AP000676.1-201ENST00000533307 52 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 U6.58-201ENST00000613107 107 ntBASIC0.52□□□□□ -2.33
EPHB3P54753 RNA5SP98-201ENST00000363158 137 ntBASIC0.51□□□□□ -2.33
EPHB3P54753 RNU6-127P-201ENST00000390897 107 ntBASIC0.51□□□□□ -2.33
EPHB3P54753 SNORD116.2-201ENST00000391251 93 ntBASIC0.51□□□□□ -2.33
EPHB3P54753 SNORA40B-201ENST00000385573 128 ntBASIC0.5□□□□□ -2.33
EPHB3P54753 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.5□□□□□ -2.33
EPHB3P54753 RNU6-172P-201ENST00000411000 93 ntBASIC0.49□□□□□ -2.33
EPHB3P54753 AC108740.1-201ENST00000498629 225 ntBASIC0.49□□□□□ -2.33
EPHB3P54753 Y_RNA.379-201ENST00000365653 102 ntBASIC0.48□□□□□ -2.33
EPHB3P54753 RNU6-980P-201ENST00000516925 103 ntBASIC0.48□□□□□ -2.33
EPHB3P54753 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.48□□□□□ -2.33
EPHB3P54753 RNU6-815P-201ENST00000384080 113 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms