Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SNORD114-29-201ENST00000364819 70 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 RNU6-828P-201ENST00000364876 107 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 MIR548AA1-201ENST00000384971 97 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 RNU6-696P-201ENST00000390834 107 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 MIR4432-201ENST00000581823 84 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 AL353997.5-201ENST00000618886 171 ntBASIC0.77□□□□□ -2.29
HMGA2P52926 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 RNU6-258P-201ENST00000390884 101 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 RNU6-721P-201ENST00000410155 105 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 RNU6-1174P-201ENST00000517278 101 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 AC108676.2-201ENST00000605225 163 ntBASIC0.76□□□□□ -2.29
HMGA2P52926 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
HMGA2P52926 RNU6-1204P-201ENST00000363948 107 ntBASIC0.75□□□□□ -2.29
HMGA2P52926 Y_RNA.423-201ENST00000384057 113 ntBASIC0.75□□□□□ -2.29
HMGA2P52926 OR2A41P-201ENST00000473586 105 ntBASIC0.75□□□□□ -2.29
HMGA2P52926 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
HMGA2P52926 MIR429-201ENST00000362106 83 ntBASIC0.74□□□□□ -2.29
HMGA2P52926 MIR378A-201ENST00000362177 66 ntBASIC0.74□□□□□ -2.29
HMGA2P52926 RNU4-45P-201ENST00000365469 141 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 MIR618-201ENST00000385287 98 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 SNORD2-201ENST00000459163 69 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 MIR3170-201ENST00000582699 77 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 AL445584.3-201ENST00000617173 78 ntBASIC0.73□□□□□ -2.29
HMGA2P52926 Y_RNA.206-201ENST00000364136 102 ntBASIC0.72□□□□□ -2.29
HMGA2P52926 SNORA2A-201ENST00000383885 135 ntBASIC0.72□□□□□ -2.29
HMGA2P52926 MIR23A-201ENST00000385245 73 ntBASIC0.72□□□□□ -2.29
HMGA2P52926 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 MIR876-201ENST00000401147 81 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 SNORD63.2-201ENST00000516303 64 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
HMGA2P52926 MIR520D-201ENST00000385002 87 ntBASIC0.7□□□□□ -2.3
HMGA2P52926 RNU6-995P-201ENST00000391244 107 ntBASIC0.7□□□□□ -2.3
HMGA2P52926 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
HMGA2P52926 AP000676.1-201ENST00000533307 52 ntBASIC0.7□□□□□ -2.3
HMGA2P52926 MIR499B-201ENST00000636498 73 ntBASIC0.7□□□□□ -2.3
HMGA2P52926 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HMGA2P52926 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGA2P52926 MIR140-201ENST00000385282 100 ntBASIC0.69□□□□□ -2.3
HMGA2P52926 RNU6-530P-201ENST00000391180 107 ntBASIC0.69□□□□□ -2.3
HMGA2P52926 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGA2P52926 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
HMGA2P52926 AC084368.1-201ENST00000620935 65 ntBASIC0.69□□□□□ -2.3
HMGA2P52926 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HMGA2P52926 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
HMGA2P52926 MIR8068-201ENST00000618032 68 ntBASIC0.68□□□□□ -2.3
HMGA2P52926 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
HMGA2P52926 Y_RNA.327-201ENST00000365201 102 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 MIR518A1-201ENST00000385068 85 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 SNORD19-201ENST00000391191 68 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 SNORD63.1-201ENST00000516178 80 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 uc_338.36-201ENST00000622331 158 ntBASIC0.67□□□□□ -2.3
HMGA2P52926 MIR373-201ENST00000362273 69 ntBASIC0.66□□□□□ -2.3
HMGA2P52926 MIR760-201ENST00000390220 80 ntBASIC0.66□□□□□ -2.3
HMGA2P52926 RNU6-392P-201ENST00000364926 101 ntBASIC0.65□□□□□ -2.31
HMGA2P52926 Y_RNA.345-201ENST00000365384 92 ntBASIC0.65□□□□□ -2.31
HMGA2P52926 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
HMGA2P52926 MIR5704-201ENST00000584029 77 ntBASIC0.65□□□□□ -2.31
HMGA2P52926 RNU6-1326P-201ENST00000391262 107 ntBASIC0.64□□□□□ -2.31
HMGA2P52926 RNU7-55P-201ENST00000459426 62 ntBASIC0.64□□□□□ -2.31
HMGA2P52926 SCARNA11.2-201ENST00000517183 154 ntBASIC0.64□□□□□ -2.31
HMGA2P52926 AP002795.1-201ENST00000534879 84 ntBASIC0.64□□□□□ -2.31
HMGA2P52926 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
HMGA2P52926 RNA5SP99-201ENST00000364020 114 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 RNA5SP128-201ENST00000365305 116 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 RNU6-894P-201ENST00000517094 105 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 RNU6-1238P-201ENST00000517215 102 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 U7.6-201ENST00000610841 64 ntBASIC0.63□□□□□ -2.31
HMGA2P52926 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
HMGA2P52926 SNORD111B-201ENST00000408587 80 ntBASIC0.62□□□□□ -2.31
HMGA2P52926 AL391099.1-201ENST00000624635 187 ntBASIC0.62□□□□□ -2.31
HMGA2P52926 SNORA42.1-201ENST00000363515 137 ntBASIC0.61□□□□□ -2.31
HMGA2P52926 RNU6-732P-201ENST00000516033 103 ntBASIC0.61□□□□□ -2.31
HMGA2P52926 MIR6507-201ENST00000613630 70 ntBASIC0.61□□□□□ -2.31
HMGA2P52926 SNORD44.1-201ENST00000363202 61 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 SNORD45.2-201ENST00000363552 72 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 Y_RNA.613-201ENST00000410726 97 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 AC096531.1-201ENST00000419107 107 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 RNU6-848P-201ENST00000515948 107 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 RNU6-617P-201ENST00000516147 107 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 RNU6-473P-201ENST00000516164 107 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 RNU6-1049P-201ENST00000516414 107 ntBASIC0.6□□□□□ -2.31
HMGA2P52926 MIR548H2-201ENST00000408874 88 ntBASIC0.59□□□□□ -2.31
HMGA2P52926 MIR1468-201ENST00000410600 86 ntBASIC0.59□□□□□ -2.31
HMGA2P52926 snoU13.31-201ENST00000607291 104 ntBASIC0.59□□□□□ -2.31
HMGA2P52926 snoR1.1-201ENST00000628177 80 ntBASIC0.59□□□□□ -2.31
HMGA2P52926 MIR6767-201ENST00000637302 66 ntBASIC0.59□□□□□ -2.31
HMGA2P52926 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HMGA2P52926 RNU6-973P-201ENST00000364690 107 ntBASIC0.58□□□□□ -2.32
HMGA2P52926 AC104408.1-201ENST00000605241 170 ntBASIC0.58□□□□□ -2.32
HMGA2P52926 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms