Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 MIR521-2-201ENST00000384818 87 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 MIR519A2-201ENST00000384990 87 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU6-402P-201ENST00000410678 103 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 AL450471.1-201ENST00000447509 127 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 AP000533.3-201ENST00000447704 118 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 AL500527.2-201ENST00000454105 95 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 RNU6-406P-201ENST00000516470 107 ntBASIC-0.46□□□□□ -2.48
LIG4P49917 SNORD74.6-201ENST00000364796 70 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 RNU6-675P-201ENST00000384236 104 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 MIR517B-201ENST00000385102 67 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 AL035461.1-201ENST00000421490 332 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 AL606753.1-201ENST00000427435 87 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.47□□□□□ -2.48
LIG4P49917 AL031737.1-201ENST00000450125 223 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 AL691482.2-201ENST00000457453 84 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 MIR548BB-201ENST00000626714 66 ntBASIC-0.47□□□□□ -2.48
LIG4P49917 MIR147A-201ENST00000385079 72 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 MIR124-2-201ENST00000385081 109 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 MIR204-201ENST00000385200 110 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 AC074348.1-201ENST00000426503 132 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 SNORA13-201ENST00000458790 133 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 AC022137.1-201ENST00000483735 151 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.48□□□□□ -2.49
LIG4P49917 RNU6-49P-201ENST00000384256 107 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 SNORD64-201ENST00000386683 67 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 SNORD77.2-201ENST00000391045 68 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 RNU6-274P-201ENST00000459566 107 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 AC093729.1-201ENST00000513074 128 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 RNU6-557P-201ENST00000516842 110 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 U2.7-201ENST00000619197 100 ntBASIC-0.49□□□□□ -2.49
LIG4P49917 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 RNU6-246P-201ENST00000384702 107 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 AL603908.1-201ENST00000406098 201 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 RNA5SP451-201ENST00000410588 110 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 RNU6-752P-201ENST00000516376 102 ntBASIC-0.5□□□□□ -2.49
LIG4P49917 SNORD114-25-201ENST00000363742 72 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 SNORD115-22-201ENST00000364456 82 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 SNORA62.4-201ENST00000365504 151 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 RNU6-44P-201ENST00000384045 107 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 AC021146.6-201ENST00000514659 117 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 SNORA40.13-201ENST00000516379 120 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 snoR1.1-201ENST00000628177 80 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 AC006160.2-201ENST00000637708 154 ntBASIC-0.51□□□□□ -2.49
LIG4P49917 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 RNU7-154P-201ENST00000516194 62 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 RNA5SP470-201ENST00000516463 106 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 AP002795.1-201ENST00000534879 84 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 AC108676.2-201ENST00000605225 163 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 MIR2052-201ENST00000636055 55 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 MIR382-201ENST00000637119 76 ntBASIC-0.52□□□□□ -2.49
LIG4P49917 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 SNORD114-17-201ENST00000364699 75 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 SNORD116-22-201ENST00000384430 92 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 RNU6-982P-201ENST00000516216 102 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 RNU6-919P-201ENST00000516731 104 ntBASIC-0.53□□□□□ -2.49
LIG4P49917 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 RNU6-645P-201ENST00000364649 106 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 HAR1A.1-201ENST00000459583 118 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 RNU6-518P-201ENST00000516056 96 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 SNORD63.1-201ENST00000516178 80 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 RNA5SP476-201ENST00000516613 103 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 RNU6-844P-201ENST00000517175 102 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.54□□□□□ -2.5
LIG4P49917 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-32P-201ENST00000383948 107 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-13P-201ENST00000384248 107 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-12P-201ENST00000384604 107 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-41P-201ENST00000384741 107 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 SNORD19-201ENST00000391191 68 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNA5SP89-201ENST00000410300 108 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU7-134P-201ENST00000458997 64 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 SNORD18.2-201ENST00000459604 70 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-303P-201ENST00000517091 106 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 U2.22-201ENST00000636441 106 ntBASIC-0.55□□□□□ -2.5
LIG4P49917 RNU6-686P-201ENST00000364839 107 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 RNU6-979P-201ENST00000383896 107 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 RNU6-30P-201ENST00000384561 107 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 MIR224-201ENST00000384889 81 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 MIR196A1-201ENST00000388006 70 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 SCARNA18B-201ENST00000458806 135 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 RNU7-174P-201ENST00000516248 59 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 MIR664A-201ENST00000626086 82 ntBASIC-0.56□□□□□ -2.5
LIG4P49917 RNU6-681P-201ENST00000364012 104 ntBASIC-0.57□□□□□ -2.5
LIG4P49917 snoU13.19-201ENST00000459148 104 ntBASIC-0.57□□□□□ -2.5
LIG4P49917 RNU6-168P-201ENST00000516189 101 ntBASIC-0.57□□□□□ -2.5
LIG4P49917 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms