Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.28□□□□□ -2.2
PRIM1P49642 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.28□□□□□ -2.21
PRIM1P49642 Y_RNA.30-201ENST00000362572 97 ntBASIC1.27□□□□□ -2.21
PRIM1P49642 MIR608-201ENST00000384820 100 ntBASIC1.27□□□□□ -2.21
PRIM1P49642 RNU6-863P-201ENST00000515989 104 ntBASIC1.27□□□□□ -2.21
PRIM1P49642 Y_RNA.379-201ENST00000365653 102 ntBASIC1.26□□□□□ -2.21
PRIM1P49642 MIR6857-201ENST00000613267 93 ntBASIC1.26□□□□□ -2.21
PRIM1P49642 RNU6-1312P-201ENST00000362425 108 ntBASIC1.25□□□□□ -2.21
PRIM1P49642 MIR4698-201ENST00000577795 80 ntBASIC1.25□□□□□ -2.21
PRIM1P49642 MIR519A2-201ENST00000384990 87 ntBASIC1.23□□□□□ -2.21
PRIM1P49642 SNORA25.18-201ENST00000607153 114 ntBASIC1.23□□□□□ -2.21
PRIM1P49642 MIR7110-201ENST00000612638 86 ntBASIC1.23□□□□□ -2.21
PRIM1P49642 MIR6773-201ENST00000612812 74 ntBASIC1.23□□□□□ -2.21
PRIM1P49642 Y_RNA.282-201ENST00000364793 102 ntBASIC1.22□□□□□ -2.21
PRIM1P49642 RNU6-246P-201ENST00000384702 107 ntBASIC1.22□□□□□ -2.21
PRIM1P49642 MIR518A1-201ENST00000385068 85 ntBASIC1.22□□□□□ -2.21
PRIM1P49642 RNU7-188P-201ENST00000517063 64 ntBASIC1.22□□□□□ -2.21
PRIM1P49642 Y_RNA.68-201ENST00000362881 102 ntBASIC1.21□□□□□ -2.22
PRIM1P49642 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
PRIM1P49642 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PRIM1P49642 SNORD115-25-201ENST00000362619 82 ntBASIC1.2□□□□□ -2.22
PRIM1P49642 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
PRIM1P49642 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
PRIM1P49642 AC084368.1-201ENST00000620935 65 ntBASIC1.2□□□□□ -2.22
PRIM1P49642 MIR4714-201ENST00000580728 77 ntBASIC1.19□□□□□ -2.22
PRIM1P49642 MIR4677-201ENST00000584153 80 ntBASIC1.19□□□□□ -2.22
PRIM1P49642 MIR193B-201ENST00000384907 83 ntBASIC1.18□□□□□ -2.22
PRIM1P49642 RNU6-1246P-201ENST00000391064 107 ntBASIC1.18□□□□□ -2.22
PRIM1P49642 MIR548AD-201ENST00000584780 82 ntBASIC1.18□□□□□ -2.22
PRIM1P49642 AC090617.8-201ENST00000623339 167 ntBASIC1.18□□□□□ -2.22
PRIM1P49642 RNA5SP457-201ENST00000363657 124 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 RNY1P8-201ENST00000383970 114 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 Y_RNA.423-201ENST00000384057 113 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 RNU6-337P-201ENST00000391243 106 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 MIR1273G-201ENST00000577677 100 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.17□□□□□ -2.22
PRIM1P49642 MIRLET7B-201ENST00000385140 83 ntBASIC1.16□□□□□ -2.22
PRIM1P49642 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.22
PRIM1P49642 Y_RNA.433-201ENST00000384089 102 ntBASIC1.15□□□□□ -2.23
PRIM1P49642 SNORD116.2-201ENST00000391251 93 ntBASIC1.15□□□□□ -2.23
PRIM1P49642 AC098934.3-201ENST00000430450 190 ntBASIC1.14□□□□□ -2.23
PRIM1P49642 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
PRIM1P49642 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.13□□□□□ -2.23
PRIM1P49642 MIR501-201ENST00000390204 84 ntBASIC1.12□□□□□ -2.23
PRIM1P49642 MIR760-201ENST00000390220 80 ntBASIC1.12□□□□□ -2.23
PRIM1P49642 RNU6-175P-201ENST00000516896 107 ntBASIC1.12□□□□□ -2.23
PRIM1P49642 RNU6-502P-201ENST00000362419 108 ntBASIC1.11□□□□□ -2.23
PRIM1P49642 RNA5SP128-201ENST00000365305 116 ntBASIC1.11□□□□□ -2.23
PRIM1P49642 SNORA49-201ENST00000386157 136 ntBASIC1.11□□□□□ -2.23
PRIM1P49642 SNORA40B-201ENST00000385573 128 ntBASIC1.1□□□□□ -2.23
PRIM1P49642 MIR876-201ENST00000401147 81 ntBASIC1.1□□□□□ -2.23
PRIM1P49642 MIR6513-201ENST00000621188 64 ntBASIC1.1□□□□□ -2.23
PRIM1P49642 RNU6-1036P-201ENST00000383959 104 ntBASIC1.09□□□□□ -2.23
PRIM1P49642 RNU6-782P-201ENST00000516852 104 ntBASIC1.08□□□□□ -2.24
PRIM1P49642 MIR924-201ENST00000638017 53 ntBASIC1.08□□□□□ -2.24
PRIM1P49642 Y_RNA.115-201ENST00000363272 98 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 RNU6-753P-201ENST00000363926 107 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 MIR106A-201ENST00000384870 81 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 RNU6-980P-201ENST00000516925 103 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 SNORA40.16-201ENST00000517238 121 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 MIR6755-201ENST00000619993 66 ntBASIC1.07□□□□□ -2.24
PRIM1P49642 MIR936-201ENST00000401264 98 ntBASIC1.06□□□□□ -2.24
PRIM1P49642 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
PRIM1P49642 RNU6-458P-201ENST00000384179 107 ntBASIC1.05□□□□□ -2.24
PRIM1P49642 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.05□□□□□ -2.24
PRIM1P49642 RNU4-88P-201ENST00000411220 86 ntBASIC1.05□□□□□ -2.24
PRIM1P49642 MIR548X-201ENST00000580069 75 ntBASIC1.05□□□□□ -2.24
PRIM1P49642 U6.58-201ENST00000613107 107 ntBASIC1.05□□□□□ -2.24
PRIM1P49642 RNU4-33P-201ENST00000364316 85 ntBASIC1.04□□□□□ -2.24
PRIM1P49642 RNU6-172P-201ENST00000411000 93 ntBASIC1.04□□□□□ -2.24
PRIM1P49642 MIR6835-201ENST00000621552 64 ntBASIC1.03□□□□□ -2.24
PRIM1P49642 SNORD1B-201ENST00000363091 84 ntBASIC1.02□□□□□ -2.25
PRIM1P49642 Y_RNA.109-201ENST00000363215 102 ntBASIC1.02□□□□□ -2.25
PRIM1P49642 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
PRIM1P49642 RNU6-1232P-201ENST00000516299 86 ntBASIC1.02□□□□□ -2.25
PRIM1P49642 RNU7-160P-201ENST00000516660 62 ntBASIC1.02□□□□□ -2.25
PRIM1P49642 SNORD114-23-201ENST00000363536 72 ntBASIC1.01□□□□□ -2.25
PRIM1P49642 MIR508-201ENST00000384857 115 ntBASIC1.01□□□□□ -2.25
PRIM1P49642 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
PRIM1P49642 snoR1.1-201ENST00000628177 80 ntBASIC1.01□□□□□ -2.25
PRIM1P49642 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
PRIM1P49642 RNA5SP193-201ENST00000410353 107 ntBASIC1□□□□□ -2.25
PRIM1P49642 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1□□□□□ -2.25
PRIM1P49642 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
PRIM1P49642 AL353803.5-201ENST00000599815 141 ntBASIC1□□□□□ -2.25
PRIM1P49642 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
PRIM1P49642 RNA5SP98-201ENST00000363158 137 ntBASIC0.98□□□□□ -2.25
PRIM1P49642 RN7SL660P-201ENST00000614852 299 ntBASIC0.98□□□□□ -2.25
PRIM1P49642 RNA5SP257-201ENST00000363023 116 ntBASIC0.97□□□□□ -2.25
PRIM1P49642 RNU6-810P-201ENST00000364001 107 ntBASIC0.97□□□□□ -2.25
PRIM1P49642 SNORD115-23-201ENST00000364461 82 ntBASIC0.96□□□□□ -2.26
PRIM1P49642 MIR146A-201ENST00000385201 99 ntBASIC0.96□□□□□ -2.26
PRIM1P49642 RNU7-129P-201ENST00000516128 62 ntBASIC0.96□□□□□ -2.26
PRIM1P49642 MIR3925-201ENST00000584674 77 ntBASIC0.96□□□□□ -2.26
PRIM1P49642 RNA5SP62-201ENST00000363457 110 ntBASIC0.95□□□□□ -2.26
PRIM1P49642 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
PRIM1P49642 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
PRIM1P49642 RNA5SP330-201ENST00000517096 96 ntBASIC0.95□□□□□ -2.26
PRIM1P49642 SCARNA11.2-201ENST00000517183 154 ntBASIC0.95□□□□□ -2.26
PRIM1P49642 uc_338.17-201ENST00000619633 179 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 1100.9 ms