Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MIR1255B2-201ENST00000408618 67 ntBASIC0.82□□□□□ -2.28
CTGFP29279 AC098934.3-201ENST00000430450 190 ntBASIC0.82□□□□□ -2.28
CTGFP29279 RNU6-1232P-201ENST00000516299 86 ntBASIC0.82□□□□□ -2.28
CTGFP29279 SCARNA16.5-201ENST00000517114 183 ntBASIC0.82□□□□□ -2.28
CTGFP29279 MIR7107-201ENST00000611489 80 ntBASIC0.82□□□□□ -2.28
CTGFP29279 MIR8087-201ENST00000612745 78 ntBASIC0.82□□□□□ -2.28
CTGFP29279 RNU6-986P-201ENST00000363133 102 ntBASIC0.81□□□□□ -2.28
CTGFP29279 Y_RNA.109-201ENST00000363215 102 ntBASIC0.81□□□□□ -2.28
CTGFP29279 SNORA49-201ENST00000386157 136 ntBASIC0.81□□□□□ -2.28
CTGFP29279 HMGN2P22-201ENST00000427588 175 ntBASIC0.81□□□□□ -2.28
CTGFP29279 MIR4490-201ENST00000582647 84 ntBASIC0.81□□□□□ -2.28
CTGFP29279 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
CTGFP29279 MIR18A-201ENST00000362310 71 ntBASIC0.8□□□□□ -2.28
CTGFP29279 RNU6-924P-201ENST00000362926 108 ntBASIC0.8□□□□□ -2.28
CTGFP29279 Y_RNA.407-201ENST00000383986 113 ntBASIC0.8□□□□□ -2.28
CTGFP29279 MIR1197-201ENST00000408818 88 ntBASIC0.8□□□□□ -2.28
CTGFP29279 MIR2909-201ENST00000617113 69 ntBASIC0.8□□□□□ -2.28
CTGFP29279 uc_338.10-201ENST00000621872 182 ntBASIC0.8□□□□□ -2.28
CTGFP29279 U6.96-201ENST00000636425 70 ntBASIC0.8□□□□□ -2.28
CTGFP29279 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
CTGFP29279 Y_RNA.433-201ENST00000384089 102 ntBASIC0.79□□□□□ -2.28
CTGFP29279 SNORD116-16-201ENST00000384533 92 ntBASIC0.79□□□□□ -2.28
CTGFP29279 RNU6-520P-201ENST00000384717 104 ntBASIC0.79□□□□□ -2.28
CTGFP29279 SNORD110-201ENST00000408189 75 ntBASIC0.79□□□□□ -2.28
CTGFP29279 RNU6-172P-201ENST00000411000 93 ntBASIC0.79□□□□□ -2.28
CTGFP29279 AC006210.1-201ENST00000424882 111 ntBASIC0.79□□□□□ -2.28
CTGFP29279 RNU7-74P-201ENST00000459104 62 ntBASIC0.79□□□□□ -2.28
CTGFP29279 RNA5SP227-201ENST00000516184 113 ntBASIC0.79□□□□□ -2.28
CTGFP29279 MIR6828-201ENST00000636181 60 ntBASIC0.79□□□□□ -2.28
CTGFP29279 Y_RNA.250-201ENST00000364542 110 ntBASIC0.78□□□□□ -2.28
CTGFP29279 MIR527-201ENST00000385244 85 ntBASIC0.78□□□□□ -2.28
CTGFP29279 RNA5SP222-201ENST00000411039 105 ntBASIC0.78□□□□□ -2.28
CTGFP29279 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
CTGFP29279 RNA5SP268-201ENST00000516828 124 ntBASIC0.78□□□□□ -2.28
CTGFP29279 U2.18-201ENST00000622185 84 ntBASIC0.78□□□□□ -2.28
CTGFP29279 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
CTGFP29279 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
CTGFP29279 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CTGFP29279 Y_RNA.74-201ENST00000362911 99 ntBASIC0.76□□□□□ -2.29
CTGFP29279 SNORA15B-2-201ENST00000384058 135 ntBASIC0.76□□□□□ -2.29
CTGFP29279 SNORA15B-1-201ENST00000384334 135 ntBASIC0.76□□□□□ -2.29
CTGFP29279 RNA5SP94-201ENST00000516917 108 ntBASIC0.76□□□□□ -2.29
CTGFP29279 MIR548X-201ENST00000580069 75 ntBASIC0.76□□□□□ -2.29
CTGFP29279 MIR7110-201ENST00000612638 86 ntBASIC0.76□□□□□ -2.29
CTGFP29279 AC243829.6-201ENST00000612652 106 ntBASIC0.76□□□□□ -2.29
CTGFP29279 AC243829.3-201ENST00000622177 108 ntBASIC0.76□□□□□ -2.29
CTGFP29279 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
CTGFP29279 SNORD114-4-201ENST00000363962 75 ntBASIC0.75□□□□□ -2.29
CTGFP29279 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
CTGFP29279 SNORA40B-201ENST00000385573 128 ntBASIC0.75□□□□□ -2.29
CTGFP29279 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.75□□□□□ -2.29
CTGFP29279 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
CTGFP29279 SNORA25.18-201ENST00000607153 114 ntBASIC0.75□□□□□ -2.29
CTGFP29279 RNU6-598P-201ENST00000364017 105 ntBASIC0.74□□□□□ -2.29
CTGFP29279 RNU6-974P-201ENST00000384099 108 ntBASIC0.74□□□□□ -2.29
CTGFP29279 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.74□□□□□ -2.29
CTGFP29279 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
CTGFP29279 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
CTGFP29279 RNU6-175P-201ENST00000516896 107 ntBASIC0.74□□□□□ -2.29
CTGFP29279 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
CTGFP29279 RNU6-246P-201ENST00000384702 107 ntBASIC0.73□□□□□ -2.29
CTGFP29279 RNU7-119P-201ENST00000459279 63 ntBASIC0.73□□□□□ -2.29
CTGFP29279 RNA5SP476-201ENST00000516613 103 ntBASIC0.73□□□□□ -2.29
CTGFP29279 MIR6773-201ENST00000612812 74 ntBASIC0.73□□□□□ -2.29
CTGFP29279 SNORD115-25-201ENST00000362619 82 ntBASIC0.72□□□□□ -2.29
CTGFP29279 RNA5SP517-201ENST00000364724 117 ntBASIC0.72□□□□□ -2.29
CTGFP29279 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
CTGFP29279 RNU7-188P-201ENST00000517063 64 ntBASIC0.72□□□□□ -2.29
CTGFP29279 RNU6-1008P-201ENST00000384160 104 ntBASIC0.71□□□□□ -2.3
CTGFP29279 RNU6-458P-201ENST00000384179 107 ntBASIC0.71□□□□□ -2.3
CTGFP29279 AL021921.1-201ENST00000442774 93 ntBASIC0.71□□□□□ -2.3
CTGFP29279 U6.58-201ENST00000613107 107 ntBASIC0.71□□□□□ -2.3
CTGFP29279 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
CTGFP29279 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
CTGFP29279 RNU7-151P-201ENST00000516930 53 ntBASIC0.7□□□□□ -2.3
CTGFP29279 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
CTGFP29279 RNU6-1036P-201ENST00000383959 104 ntBASIC0.69□□□□□ -2.3
CTGFP29279 RNU6-724P-201ENST00000390958 105 ntBASIC0.69□□□□□ -2.3
CTGFP29279 Y_RNA.698-201ENST00000516798 118 ntBASIC0.69□□□□□ -2.3
CTGFP29279 RNU6-782P-201ENST00000516852 104 ntBASIC0.69□□□□□ -2.3
CTGFP29279 RN7SL660P-201ENST00000614852 299 ntBASIC0.69□□□□□ -2.3
CTGFP29279 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CTGFP29279 RNU6-838P-201ENST00000363399 108 ntBASIC0.68□□□□□ -2.3
CTGFP29279 Y_RNA.423-201ENST00000384057 113 ntBASIC0.68□□□□□ -2.3
CTGFP29279 MIRLET7B-201ENST00000385140 83 ntBASIC0.68□□□□□ -2.3
CTGFP29279 RNU6-419P-201ENST00000517030 63 ntBASIC0.68□□□□□ -2.3
CTGFP29279 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.68□□□□□ -2.3
CTGFP29279 MIR6755-201ENST00000619993 66 ntBASIC0.68□□□□□ -2.3
CTGFP29279 RNU6-502P-201ENST00000362419 108 ntBASIC0.67□□□□□ -2.3
CTGFP29279 MIR501-201ENST00000390204 84 ntBASIC0.67□□□□□ -2.3
CTGFP29279 RNU7-88P-201ENST00000458752 63 ntBASIC0.67□□□□□ -2.3
CTGFP29279 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CTGFP29279 Y_RNA.69-201ENST00000362885 109 ntBASIC0.66□□□□□ -2.3
CTGFP29279 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
CTGFP29279 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CTGFP29279 RNU6-1267P-201ENST00000410747 107 ntBASIC0.65□□□□□ -2.31
CTGFP29279 AC244090.1-201ENST00000441884 93 ntBASIC0.65□□□□□ -2.31
CTGFP29279 AL353803.5-201ENST00000599815 141 ntBASIC0.65□□□□□ -2.31
CTGFP29279 MIR20A-201ENST00000362279 71 ntBASIC0.64□□□□□ -2.31
CTGFP29279 MIR106A-201ENST00000384870 81 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 261.3 ms