Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-782P-201ENST00000516852 104 ntBASIC0.31□□□□□ -2.36
HLA-DOAP06340 U6.111-201ENST00000636093 83 ntBASIC0.31□□□□□ -2.36
HLA-DOAP06340 U6.96-201ENST00000636425 70 ntBASIC0.31□□□□□ -2.36
HLA-DOAP06340 RNU6-668P-201ENST00000364180 107 ntBASIC0.3□□□□□ -2.36
HLA-DOAP06340 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
HLA-DOAP06340 Y_RNA.115-201ENST00000363272 98 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 SNORA15B-2-201ENST00000384058 135 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 Y_RNA.443-201ENST00000384135 111 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 SNORA15B-1-201ENST00000384334 135 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 MTND4LP1-201ENST00000446263 157 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 RNU6-539P-201ENST00000516665 103 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 AC005520.4-201ENST00000604337 90 ntBASIC0.29□□□□□ -2.36
HLA-DOAP06340 RNA5SP457-201ENST00000363657 124 ntBASIC0.28□□□□□ -2.36
HLA-DOAP06340 Y_RNA.386-201ENST00000383913 105 ntBASIC0.28□□□□□ -2.36
HLA-DOAP06340 CYP3A54P-201ENST00000566950 75 ntBASIC0.28□□□□□ -2.36
HLA-DOAP06340 AC023932.2-201ENST00000603176 175 ntBASIC0.28□□□□□ -2.36
HLA-DOAP06340 MIR6773-201ENST00000612812 74 ntBASIC0.28□□□□□ -2.36
HLA-DOAP06340 RNU6-800P-201ENST00000384473 103 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 MIR593-201ENST00000384856 100 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 SNORA75.1-201ENST00000391130 148 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 RNU6-1089P-201ENST00000516473 104 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 AP000676.1-201ENST00000533307 52 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 U2.7-201ENST00000619197 100 ntBASIC0.27□□□□□ -2.37
HLA-DOAP06340 MIR548V-201ENST00000584165 80 ntBASIC0.26□□□□□ -2.37
HLA-DOAP06340 AC104408.1-201ENST00000605241 170 ntBASIC0.26□□□□□ -2.37
HLA-DOAP06340 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
HLA-DOAP06340 MIR6514-201ENST00000622549 70 ntBASIC0.26□□□□□ -2.37
HLA-DOAP06340 RNU6-502P-201ENST00000362419 108 ntBASIC0.25□□□□□ -2.37
HLA-DOAP06340 RNA5SP163-201ENST00000410304 99 ntBASIC0.25□□□□□ -2.37
HLA-DOAP06340 SNORD115-25-201ENST00000362619 82 ntBASIC0.24□□□□□ -2.37
HLA-DOAP06340 MIR1255B2-201ENST00000408618 67 ntBASIC0.24□□□□□ -2.37
HLA-DOAP06340 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
HLA-DOAP06340 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
HLA-DOAP06340 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
HLA-DOAP06340 SNORD114-5-201ENST00000362928 70 ntBASIC0.22□□□□□ -2.37
HLA-DOAP06340 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
HLA-DOAP06340 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.22□□□□□ -2.37
HLA-DOAP06340 SNORA25.4-201ENST00000363666 124 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 MIR630-201ENST00000384957 97 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 MIRLET7B-201ENST00000385140 83 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 RNU6-1246P-201ENST00000391064 107 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
HLA-DOAP06340 Y_RNA.375-201ENST00000365625 101 ntBASIC0.2□□□□□ -2.38
HLA-DOAP06340 RNA5SP299-201ENST00000391203 116 ntBASIC0.2□□□□□ -2.38
HLA-DOAP06340 RNU7-174P-201ENST00000516248 59 ntBASIC0.2□□□□□ -2.38
HLA-DOAP06340 RNA5SP98-201ENST00000363158 137 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 MIR519A2-201ENST00000384990 87 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
HLA-DOAP06340 RNA5SP63-201ENST00000391225 112 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 RNU6-518P-201ENST00000516056 96 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 RNU6-180P-201ENST00000516697 61 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 MIR548AG1-201ENST00000579932 66 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 MIR6507-201ENST00000613630 70 ntBASIC0.19□□□□□ -2.38
HLA-DOAP06340 SNORD2-201ENST00000459163 69 ntBASIC0.18□□□□□ -2.38
HLA-DOAP06340 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
HLA-DOAP06340 U4.4-201ENST00000620626 117 ntBASIC0.18□□□□□ -2.38
HLA-DOAP06340 uc_338.36-201ENST00000622331 158 ntBASIC0.18□□□□□ -2.38
HLA-DOAP06340 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
HLA-DOAP06340 MIR1265-201ENST00000408444 86 ntBASIC0.17□□□□□ -2.38
HLA-DOAP06340 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
HLA-DOAP06340 MIR517B-201ENST00000385102 67 ntBASIC0.16□□□□□ -2.38
HLA-DOAP06340 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
HLA-DOAP06340 CR383656.4-201ENST00000546909 122 ntBASIC0.16□□□□□ -2.38
HLA-DOAP06340 MIR2909-201ENST00000617113 69 ntBASIC0.16□□□□□ -2.38
HLA-DOAP06340 RNA5SP215-201ENST00000363440 122 ntBASIC0.15□□□□□ -2.39
HLA-DOAP06340 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
HLA-DOAP06340 Y_RNA.325-201ENST00000365171 122 ntBASIC0.15□□□□□ -2.39
HLA-DOAP06340 Y_RNA.340-201ENST00000365330 92 ntBASIC0.15□□□□□ -2.39
HLA-DOAP06340 RNU6-590P-201ENST00000365039 107 ntBASIC0.14□□□□□ -2.39
HLA-DOAP06340 MIR9-2-201ENST00000384838 87 ntBASIC0.14□□□□□ -2.39
HLA-DOAP06340 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.14□□□□□ -2.39
HLA-DOAP06340 RNU6-929P-201ENST00000384429 107 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 RNU6-455P-201ENST00000384681 107 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 RNU7-165P-201ENST00000458864 60 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 RNU6-542P-201ENST00000516405 103 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 MIR4511-201ENST00000582784 87 ntBASIC0.13□□□□□ -2.39
HLA-DOAP06340 RNU6-698P-201ENST00000363523 107 ntBASIC0.12□□□□□ -2.39
HLA-DOAP06340 RNU6-34P-201ENST00000364874 107 ntBASIC0.12□□□□□ -2.39
HLA-DOAP06340 Y_RNA.30-201ENST00000362572 97 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 SNORD115-23-201ENST00000364461 82 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 Y_RNA.246-201ENST00000364495 108 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 AC244250.2-201ENST00000418731 148 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 AL021921.1-201ENST00000442774 93 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 SCARNA21.1-201ENST00000515996 128 ntBASIC0.11□□□□□ -2.39
HLA-DOAP06340 RNU6-471P-201ENST00000383944 106 ntBASIC0.1□□□□□ -2.39
HLA-DOAP06340 RNU6-788P-201ENST00000390967 104 ntBASIC0.1□□□□□ -2.39
HLA-DOAP06340 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
HLA-DOAP06340 AL353803.5-201ENST00000599815 141 ntBASIC0.1□□□□□ -2.39
HLA-DOAP06340 MIR148A-201ENST00000362215 68 ntBASIC0.09□□□□□ -2.4
HLA-DOAP06340 RNA5SP257-201ENST00000363023 116 ntBASIC0.09□□□□□ -2.4
HLA-DOAP06340 SNORD113-2-201ENST00000391082 72 ntBASIC0.09□□□□□ -2.4
HLA-DOAP06340 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
HLA-DOAP06340 RNU7-55P-201ENST00000459426 62 ntBASIC0.09□□□□□ -2.4
HLA-DOAP06340 RNA5SP192-201ENST00000364404 120 ntBASIC0.08□□□□□ -2.4
HLA-DOAP06340 AC125388.1-201ENST00000459631 156 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms