Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.97□□□□□ -2.88
SSNA1O43805 AL157777.2-201ENST00000258070 137 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 RNU6-682P-201ENST00000363843 106 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 MIR548A3-201ENST00000385297 97 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.98□□□□□ -2.89
SSNA1O43805 RNU6-645P-201ENST00000364649 106 ntBASIC-2.99□□□□□ -2.89
SSNA1O43805 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.99□□□□□ -2.89
SSNA1O43805 MIR569-201ENST00000385228 96 ntBASIC-2.99□□□□□ -2.89
SSNA1O43805 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.99□□□□□ -2.89
SSNA1O43805 MIR23C-201ENST00000579846 100 ntBASIC-2.99□□□□□ -2.89
SSNA1O43805 Y_RNA.649-201ENST00000459077 103 ntBASIC-3□□□□□ -2.89
SSNA1O43805 MIR548AM-201ENST00000584298 74 ntBASIC-3□□□□□ -2.89
SSNA1O43805 MIR3144-201ENST00000579460 79 ntBASIC-3.01□□□□□ -2.89
SSNA1O43805 MIR4801-201ENST00000582704 82 ntBASIC-3.01□□□□□ -2.89
SSNA1O43805 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.02□□□□□ -2.89
SSNA1O43805 RNU7-120P-201ENST00000459334 63 ntBASIC-3.02□□□□□ -2.89
SSNA1O43805 RNU7-153P-201ENST00000516455 62 ntBASIC-3.02□□□□□ -2.89
SSNA1O43805 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.02□□□□□ -2.89
SSNA1O43805 SNORD116-10-201ENST00000363791 102 ntBASIC-3.03□□□□□ -2.89
SSNA1O43805 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.03□□□□□ -2.89
SSNA1O43805 AC120024.2-201ENST00000576526 175 ntBASIC-3.03□□□□□ -2.89
SSNA1O43805 AC008737.2-201ENST00000599446 118 ntBASIC-3.03□□□□□ -2.89
SSNA1O43805 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.04□□□□□ -2.9
SSNA1O43805 RNU6-563P-201ENST00000364872 108 ntBASIC-3.04□□□□□ -2.9
SSNA1O43805 RNA5SP476-201ENST00000516613 103 ntBASIC-3.04□□□□□ -2.9
SSNA1O43805 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.04□□□□□ -2.9
SSNA1O43805 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.05□□□□□ -2.9
SSNA1O43805 SCARNA23-201ENST00000516060 130 ntBASIC-3.05□□□□□ -2.9
SSNA1O43805 MIR429-201ENST00000362106 83 ntBASIC-3.06□□□□□ -2.9
SSNA1O43805 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.06□□□□□ -2.9
SSNA1O43805 RNU7-174P-201ENST00000516248 59 ntBASIC-3.06□□□□□ -2.9
SSNA1O43805 RNU6-980P-201ENST00000516925 103 ntBASIC-3.06□□□□□ -2.9
SSNA1O43805 RNU6-537P-201ENST00000517277 103 ntBASIC-3.06□□□□□ -2.9
SSNA1O43805 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 Y_RNA.145-201ENST00000363527 102 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 SNORD77.2-201ENST00000391045 68 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 MTCYBP9-201ENST00000431021 303 ntBASIC-3.07□□□□□ -2.9
SSNA1O43805 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.07□□□□□ -2.9
SSNA1O43805 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.08□□□□□ -2.9
SSNA1O43805 RNU6-394P-201ENST00000410735 107 ntBASIC-3.08□□□□□ -2.9
SSNA1O43805 RNU6-598P-201ENST00000364017 105 ntBASIC-3.09□□□□□ -2.9
SSNA1O43805 MIR1302-3-201ENST00000408128 138 ntBASIC-3.09□□□□□ -2.9
SSNA1O43805 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.1□□□□□ -2.91
SSNA1O43805 MIR568-201ENST00000385036 95 ntBASIC-3.1□□□□□ -2.91
SSNA1O43805 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 MIR606-201ENST00000384851 96 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 RNU6-587P-201ENST00000391282 106 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 RNU4-88P-201ENST00000411220 86 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 HAR1A.1-201ENST00000459583 118 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 RNU6-904P-201ENST00000516206 101 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 RNU6-426P-201ENST00000516464 97 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.12□□□□□ -2.91
SSNA1O43805 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 RNU6-804P-201ENST00000384286 107 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 RNU6-258P-201ENST00000390884 101 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 MTND4LP9-201ENST00000427694 174 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 U2.18-201ENST00000622185 84 ntBASIC-3.13□□□□□ -2.91
SSNA1O43805 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 Y_RNA.413-201ENST00000384007 102 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 RNU7-107P-201ENST00000459121 61 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 Y_RNA.754-201ENST00000476024 102 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 Y_RNA.790-201ENST00000614282 102 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 Y_RNA.782-201ENST00000614695 102 ntBASIC-3.14□□□□□ -2.91
SSNA1O43805 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.15□□□□□ -2.91
SSNA1O43805 SNORD33.1-201ENST00000516213 88 ntBASIC-3.15□□□□□ -2.91
SSNA1O43805 RNU6-574P-201ENST00000384265 107 ntBASIC-3.16□□□□□ -2.92
SSNA1O43805 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.16□□□□□ -2.92
SSNA1O43805 RNU7-61P-201ENST00000515897 61 ntBASIC-3.16□□□□□ -2.92
SSNA1O43805 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.16□□□□□ -2.92
SSNA1O43805 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.16□□□□□ -2.92
SSNA1O43805 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.18□□□□□ -2.92
SSNA1O43805 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.18□□□□□ -2.92
SSNA1O43805 Y_RNA.55-201ENST00000362797 102 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 RNA5SP405-201ENST00000363059 114 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 Y_RNA.700-201ENST00000516806 100 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 MIR3170-201ENST00000582699 77 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 MIR3914-2-201ENST00000637339 95 ntBASIC-3.19□□□□□ -2.92
SSNA1O43805 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.2□□□□□ -2.92
SSNA1O43805 U4.4-201ENST00000620626 117 ntBASIC-3.2□□□□□ -2.92
SSNA1O43805 Y_RNA.488-201ENST00000384403 102 ntBASIC-3.21□□□□□ -2.92
SSNA1O43805 RNU6-880P-201ENST00000384526 107 ntBASIC-3.21□□□□□ -2.92
SSNA1O43805 RNU6-698P-201ENST00000363523 107 ntBASIC-3.22□□□□□ -2.92
SSNA1O43805 RNU6-34P-201ENST00000364874 107 ntBASIC-3.22□□□□□ -2.92
SSNA1O43805 MIR519C-201ENST00000385053 87 ntBASIC-3.22□□□□□ -2.92
SSNA1O43805 Y_RNA.375-201ENST00000365625 101 ntBASIC-3.23□□□□□ -2.93
SSNA1O43805 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.23□□□□□ -2.93
SSNA1O43805 RNU6-162P-201ENST00000516228 103 ntBASIC-3.23□□□□□ -2.93
SSNA1O43805 RNU6-194P-201ENST00000363862 105 ntBASIC-3.24□□□□□ -2.93
SSNA1O43805 RNU6-738P-201ENST00000384531 106 ntBASIC-3.24□□□□□ -2.93
SSNA1O43805 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.24□□□□□ -2.93
SSNA1O43805 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.25□□□□□ -2.93
SSNA1O43805 RNU6-604P-201ENST00000390917 100 ntBASIC-3.25□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms