Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 U6.111-201ENST00000636093 83 ntBASIC0.43□□□□□ -2.34
SHOXO15266 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
SHOXO15266 RNU6-656P-201ENST00000516785 107 ntBASIC0.42□□□□□ -2.34
SHOXO15266 U6.96-201ENST00000636425 70 ntBASIC0.42□□□□□ -2.34
SHOXO15266 RNU6-590P-201ENST00000365039 107 ntBASIC0.41□□□□□ -2.34
SHOXO15266 RNU6-127P-201ENST00000390897 107 ntBASIC0.41□□□□□ -2.34
SHOXO15266 MIR892B-201ENST00000401279 77 ntBASIC0.41□□□□□ -2.34
SHOXO15266 MIR3925-201ENST00000584674 77 ntBASIC0.41□□□□□ -2.34
SHOXO15266 SNORA25.4-201ENST00000363666 124 ntBASIC0.4□□□□□ -2.35
SHOXO15266 Y_RNA.443-201ENST00000384135 111 ntBASIC0.4□□□□□ -2.35
SHOXO15266 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
SHOXO15266 RNA5SP476-201ENST00000516613 103 ntBASIC0.4□□□□□ -2.35
SHOXO15266 SNORA33.1-201ENST00000364957 130 ntBASIC0.39□□□□□ -2.35
SHOXO15266 SNORD116-24-201ENST00000384549 92 ntBASIC0.39□□□□□ -2.35
SHOXO15266 RNA5SP63-201ENST00000391225 112 ntBASIC0.39□□□□□ -2.35
SHOXO15266 RNU6-630P-201ENST00000391258 106 ntBASIC0.39□□□□□ -2.35
SHOXO15266 MIR1265-201ENST00000408444 86 ntBASIC0.39□□□□□ -2.35
SHOXO15266 RNU6-175P-201ENST00000516896 107 ntBASIC0.39□□□□□ -2.35
SHOXO15266 MIR4315-1-201ENST00000636800 73 ntBASIC0.39□□□□□ -2.35
SHOXO15266 MIR4315-2-201ENST00000640925 73 ntBASIC0.39□□□□□ -2.35
SHOXO15266 RNA5SP215-201ENST00000363440 122 ntBASIC0.38□□□□□ -2.35
SHOXO15266 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
SHOXO15266 RNU6-1036P-201ENST00000383959 104 ntBASIC0.38□□□□□ -2.35
SHOXO15266 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.38□□□□□ -2.35
SHOXO15266 MIR106A-201ENST00000384870 81 ntBASIC0.37□□□□□ -2.35
SHOXO15266 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.37□□□□□ -2.35
SHOXO15266 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
SHOXO15266 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
SHOXO15266 RN7SL660P-201ENST00000614852 299 ntBASIC0.37□□□□□ -2.35
SHOXO15266 RNU6-800P-201ENST00000384473 103 ntBASIC0.36□□□□□ -2.35
SHOXO15266 AC139453.2-201ENST00000487255 133 ntBASIC0.36□□□□□ -2.35
SHOXO15266 RNU6-1089P-201ENST00000516473 104 ntBASIC0.36□□□□□ -2.35
SHOXO15266 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
SHOXO15266 RNA5SP98-201ENST00000363158 137 ntBASIC0.35□□□□□ -2.35
SHOXO15266 MIR548C-201ENST00000384815 97 ntBASIC0.35□□□□□ -2.35
SHOXO15266 MIR610-201ENST00000385139 96 ntBASIC0.35□□□□□ -2.35
SHOXO15266 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
SHOXO15266 RNA5SP499-201ENST00000363982 119 ntBASIC0.34□□□□□ -2.36
SHOXO15266 RNU6-302P-201ENST00000365249 107 ntBASIC0.34□□□□□ -2.36
SHOXO15266 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
SHOXO15266 SNORD115-25-201ENST00000362619 82 ntBASIC0.33□□□□□ -2.36
SHOXO15266 MIR4743-201ENST00000584576 69 ntBASIC0.33□□□□□ -2.36
SHOXO15266 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
SHOXO15266 AC005520.4-201ENST00000604337 90 ntBASIC0.32□□□□□ -2.36
SHOXO15266 Y_RNA.375-201ENST00000365625 101 ntBASIC0.31□□□□□ -2.36
SHOXO15266 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
SHOXO15266 SNORA49-201ENST00000386157 136 ntBASIC0.31□□□□□ -2.36
SHOXO15266 RNU6-542P-201ENST00000516405 103 ntBASIC0.31□□□□□ -2.36
SHOXO15266 MIR6514-201ENST00000622549 70 ntBASIC0.31□□□□□ -2.36
SHOXO15266 CR383656.4-201ENST00000546909 122 ntBASIC0.3□□□□□ -2.36
SHOXO15266 MIR6773-201ENST00000612812 74 ntBASIC0.3□□□□□ -2.36
SHOXO15266 MIR148A-201ENST00000362215 68 ntBASIC0.29□□□□□ -2.36
SHOXO15266 RNU6-30P-201ENST00000384561 107 ntBASIC0.29□□□□□ -2.36
SHOXO15266 RNU6-788P-201ENST00000390967 104 ntBASIC0.29□□□□□ -2.36
SHOXO15266 CYP3A54P-201ENST00000566950 75 ntBASIC0.29□□□□□ -2.36
SHOXO15266 AC103706.3-201ENST00000636297 85 ntBASIC0.29□□□□□ -2.36
SHOXO15266 SNORA42.1-201ENST00000363515 137 ntBASIC0.28□□□□□ -2.36
SHOXO15266 Y_RNA.185-201ENST00000363894 100 ntBASIC0.28□□□□□ -2.36
SHOXO15266 RNA5SP163-201ENST00000410304 99 ntBASIC0.28□□□□□ -2.36
SHOXO15266 AL021921.1-201ENST00000442774 93 ntBASIC0.28□□□□□ -2.36
SHOXO15266 AC125388.1-201ENST00000459631 156 ntBASIC0.28□□□□□ -2.36
SHOXO15266 U2.7-201ENST00000619197 100 ntBASIC0.28□□□□□ -2.36
SHOXO15266 MIR517B-201ENST00000385102 67 ntBASIC0.27□□□□□ -2.37
SHOXO15266 snoU13.19-201ENST00000459148 104 ntBASIC0.27□□□□□ -2.37
SHOXO15266 RNA5SP299-201ENST00000391203 116 ntBASIC0.26□□□□□ -2.37
SHOXO15266 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.26□□□□□ -2.37
SHOXO15266 RNA5SP470-201ENST00000516463 106 ntBASIC0.26□□□□□ -2.37
SHOXO15266 AP000676.1-201ENST00000533307 52 ntBASIC0.26□□□□□ -2.37
SHOXO15266 RNU6-502P-201ENST00000362419 108 ntBASIC0.25□□□□□ -2.37
SHOXO15266 RNU6-471P-201ENST00000383944 106 ntBASIC0.25□□□□□ -2.37
SHOXO15266 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SHOXO15266 AC104408.1-201ENST00000605241 170 ntBASIC0.25□□□□□ -2.37
SHOXO15266 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SHOXO15266 MIRLET7B-201ENST00000385140 83 ntBASIC0.24□□□□□ -2.37
SHOXO15266 RNU6-180P-201ENST00000516697 61 ntBASIC0.24□□□□□ -2.37
SHOXO15266 MIR5589-201ENST00000579442 60 ntBASIC0.24□□□□□ -2.37
SHOXO15266 MIR4511-201ENST00000582784 87 ntBASIC0.24□□□□□ -2.37
SHOXO15266 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
SHOXO15266 RNU6-698P-201ENST00000363523 107 ntBASIC0.23□□□□□ -2.37
SHOXO15266 RNU6-34P-201ENST00000364874 107 ntBASIC0.23□□□□□ -2.37
SHOXO15266 Y_RNA.340-201ENST00000365330 92 ntBASIC0.23□□□□□ -2.37
SHOXO15266 Y_RNA.386-201ENST00000383913 105 ntBASIC0.23□□□□□ -2.37
SHOXO15266 MIR1255B2-201ENST00000408618 67 ntBASIC0.23□□□□□ -2.37
SHOXO15266 RNU7-159P-201ENST00000459284 62 ntBASIC0.23□□□□□ -2.37
SHOXO15266 RNU6-518P-201ENST00000516056 96 ntBASIC0.23□□□□□ -2.37
SHOXO15266 MIR4636-201ENST00000582271 80 ntBASIC0.23□□□□□ -2.37
SHOXO15266 MIR548V-201ENST00000584165 80 ntBASIC0.23□□□□□ -2.37
SHOXO15266 AL627230.5-201ENST00000619807 58 ntBASIC0.23□□□□□ -2.37
SHOXO15266 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
SHOXO15266 SNORD113-2-201ENST00000391082 72 ntBASIC0.22□□□□□ -2.37
SHOXO15266 RNU6-337P-201ENST00000391243 106 ntBASIC0.22□□□□□ -2.37
SHOXO15266 RNU7-174P-201ENST00000516248 59 ntBASIC0.22□□□□□ -2.37
SHOXO15266 MIR2909-201ENST00000617113 69 ntBASIC0.22□□□□□ -2.37
SHOXO15266 MIR371B-201ENST00000638082 66 ntBASIC0.22□□□□□ -2.37
SHOXO15266 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
SHOXO15266 MIR548H2-201ENST00000408874 88 ntBASIC0.21□□□□□ -2.38
SHOXO15266 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.21□□□□□ -2.38
SHOXO15266 snoR1.1-201ENST00000628177 80 ntBASIC0.21□□□□□ -2.38
SHOXO15266 MIR6759-201ENST00000638110 65 ntBASIC0.21□□□□□ -2.38
SHOXO15266 RNU7-154P-201ENST00000516194 62 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms