Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-645P-201ENST00000364649 106 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 MIR520D-201ENST00000385002 87 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 RNU6-630P-201ENST00000391258 106 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 SCARNA23-201ENST00000516060 130 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 MIR3144-201ENST00000579460 79 ntBASIC-1.99□□□□□ -2.73
SDCBPO00560 SNORD115-27-201ENST00000364430 82 ntBASIC-2□□□□□ -2.73
SDCBPO00560 MIR601-201ENST00000385256 79 ntBASIC-2□□□□□ -2.73
SDCBPO00560 RNU6-696P-201ENST00000390834 107 ntBASIC-2□□□□□ -2.73
SDCBPO00560 SNORD33.1-201ENST00000516213 88 ntBASIC-2□□□□□ -2.73
SDCBPO00560 RNU6-1262P-201ENST00000516217 96 ntBASIC-2□□□□□ -2.73
SDCBPO00560 SNORD116-10-201ENST00000363791 102 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 RNU6-574P-201ENST00000384265 107 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 MIR548C-201ENST00000384815 97 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 RNU6-904P-201ENST00000516206 101 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 RNU6-537P-201ENST00000517277 103 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 MIR1246-201ENST00000636535 73 ntBASIC-2.01□□□□□ -2.73
SDCBPO00560 RNU6-681P-201ENST00000364012 104 ntBASIC-2.02□□□□□ -2.73
SDCBPO00560 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.02□□□□□ -2.73
SDCBPO00560 RNU7-174P-201ENST00000516248 59 ntBASIC-2.02□□□□□ -2.73
SDCBPO00560 MTND5P41-201ENST00000517498 206 ntBASIC-2.02□□□□□ -2.73
SDCBPO00560 MIR548A3-201ENST00000385297 97 ntBASIC-2.03□□□□□ -2.73
SDCBPO00560 MIR3914-2-201ENST00000637339 95 ntBASIC-2.03□□□□□ -2.73
SDCBPO00560 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 RNU6-867P-201ENST00000364956 107 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 SNORD77.2-201ENST00000391045 68 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 RNU7-61P-201ENST00000515897 61 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.04□□□□□ -2.74
SDCBPO00560 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 SNORD18.1-201ENST00000363807 70 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 RNU6-598P-201ENST00000364017 105 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.05□□□□□ -2.74
SDCBPO00560 RNU6-200P-201ENST00000364743 107 ntBASIC-2.06□□□□□ -2.74
SDCBPO00560 RNU6-540P-201ENST00000384622 101 ntBASIC-2.06□□□□□ -2.74
SDCBPO00560 MIR1285-2-201ENST00000408311 88 ntBASIC-2.06□□□□□ -2.74
SDCBPO00560 MIR4503-201ENST00000582187 83 ntBASIC-2.06□□□□□ -2.74
SDCBPO00560 AC004792.1-201ENST00000614523 137 ntBASIC-2.06□□□□□ -2.74
SDCBPO00560 RNU6-797P-201ENST00000363101 109 ntBASIC-2.07□□□□□ -2.74
SDCBPO00560 RNU6-587P-201ENST00000391282 106 ntBASIC-2.07□□□□□ -2.74
SDCBPO00560 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.07□□□□□ -2.74
SDCBPO00560 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.08□□□□□ -2.74
SDCBPO00560 RNU6-695P-201ENST00000391157 104 ntBASIC-2.08□□□□□ -2.74
SDCBPO00560 RNU6-257P-201ENST00000410238 98 ntBASIC-2.08□□□□□ -2.74
SDCBPO00560 RNU6-162P-201ENST00000516228 103 ntBASIC-2.08□□□□□ -2.74
SDCBPO00560 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.08□□□□□ -2.74
SDCBPO00560 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 U2.18-201ENST00000622185 84 ntBASIC-2.09□□□□□ -2.74
SDCBPO00560 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.1□□□□□ -2.75
SDCBPO00560 RNU6-563P-201ENST00000364872 108 ntBASIC-2.1□□□□□ -2.75
SDCBPO00560 SNORA40-201ENST00000388090 126 ntBASIC-2.1□□□□□ -2.75
SDCBPO00560 RNU6-228P-201ENST00000362700 106 ntBASIC-2.11□□□□□ -2.75
SDCBPO00560 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.11□□□□□ -2.75
SDCBPO00560 AL627230.5-201ENST00000619807 58 ntBASIC-2.11□□□□□ -2.75
SDCBPO00560 U4.4-201ENST00000620626 117 ntBASIC-2.11□□□□□ -2.75
SDCBPO00560 MIR365A-201ENST00000362260 87 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 RNU6-330P-201ENST00000363015 107 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 MIR590-201ENST00000385008 97 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
SDCBPO00560 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 RNU6-971P-201ENST00000516920 106 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 AC120024.2-201ENST00000576526 175 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 U7.3-201ENST00000616123 62 ntBASIC-2.12□□□□□ -2.75
SDCBPO00560 MIR519C-201ENST00000385053 87 ntBASIC-2.13□□□□□ -2.75
SDCBPO00560 AC108019.1-201ENST00000512540 175 ntBASIC-2.13□□□□□ -2.75
SDCBPO00560 RNU6-983P-201ENST00000516004 103 ntBASIC-2.13□□□□□ -2.75
SDCBPO00560 RNU6-982P-201ENST00000516216 102 ntBASIC-2.13□□□□□ -2.75
SDCBPO00560 MIR4441-201ENST00000582623 100 ntBASIC-2.13□□□□□ -2.75
SDCBPO00560 MIR1468-201ENST00000410600 86 ntBASIC-2.14□□□□□ -2.75
SDCBPO00560 MIR23C-201ENST00000579846 100 ntBASIC-2.14□□□□□ -2.75
SDCBPO00560 U6.95-201ENST00000636931 70 ntBASIC-2.14□□□□□ -2.75
SDCBPO00560 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.15□□□□□ -2.75
SDCBPO00560 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.15□□□□□ -2.75
SDCBPO00560 MIR3170-201ENST00000582699 77 ntBASIC-2.15□□□□□ -2.75
SDCBPO00560 MIR3123-201ENST00000583417 75 ntBASIC-2.15□□□□□ -2.75
SDCBPO00560 MIR429-201ENST00000362106 83 ntBASIC-2.16□□□□□ -2.76
SDCBPO00560 SNORA63-201ENST00000363450 132 ntBASIC-2.16□□□□□ -2.76
SDCBPO00560 RNU6-158P-201ENST00000517104 100 ntBASIC-2.16□□□□□ -2.76
SDCBPO00560 RNU6-698P-201ENST00000363523 107 ntBASIC-2.17□□□□□ -2.76
SDCBPO00560 RNU6-379P-201ENST00000363813 104 ntBASIC-2.17□□□□□ -2.76
SDCBPO00560 RNU6-34P-201ENST00000364874 107 ntBASIC-2.17□□□□□ -2.76
SDCBPO00560 RNU6-880P-201ENST00000384526 107 ntBASIC-2.17□□□□□ -2.76
SDCBPO00560 RNU6-258P-201ENST00000390884 101 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms