Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 U7.3-201ENST00000616123 62 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 MIR6086-201ENST00000638065 55 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-14-201ENST00000383894 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-17-201ENST00000383929 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-15-201ENST00000384445 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 SNORD116-19-201ENST00000384729 92 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AL035461.1-201ENST00000421490 332 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 RNU6-162P-201ENST00000516228 103 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AC138207.3-201ENST00000585289 166 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 AC099654.10-201ENST00000640395 161 ntBASIC-1.83□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 U7.5-201ENST00000517224 61 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 MIR519C-201ENST00000385053 87 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.85□□□□□ -2.71
SMKR1H3BMG3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 U2.7-201ENST00000619197 100 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 MIR5683-201ENST00000636514 76 ntBASIC-1.86□□□□□ -2.71
SMKR1H3BMG3 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.87□□□□□ -2.71
SMKR1H3BMG3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.87□□□□□ -2.71
SMKR1H3BMG3 SNORD115-27-201ENST00000364430 82 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-30P-201ENST00000384561 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-109P-201ENST00000516364 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNU6-184P-201ENST00000516514 107 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 RNA5SP395-201ENST00000516567 118 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.88□□□□□ -2.71
SMKR1H3BMG3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 SNORD19-201ENST00000391191 68 ntBASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 snoU13.19-201ENST00000459148 104 ntBASIC-1.89□□□□□ -2.71
SMKR1H3BMG3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.91□□□□□ -2.72
SMKR1H3BMG3 AP002795.1-201ENST00000534879 84 ntBASIC-1.91□□□□□ -2.72
SMKR1H3BMG3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 MIR8485-201ENST00000401372 91 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.92□□□□□ -2.72
SMKR1H3BMG3 RNU6-774P-201ENST00000363238 107 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 RNU6-106P-201ENST00000384405 107 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 RNU6-554P-201ENST00000410466 106 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 AC091912.2-201ENST00000624798 167 ntBASIC-1.93□□□□□ -2.72
SMKR1H3BMG3 MIR548C-201ENST00000384815 97 ntBASIC-1.94□□□□□ -2.72
SMKR1H3BMG3 AL078595.1-201ENST00000404458 226 ntBASIC-1.94□□□□□ -2.72
SMKR1H3BMG3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.95□□□□□ -2.72
SMKR1H3BMG3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.96□□□□□ -2.72
SMKR1H3BMG3 MIR889-201ENST00000401280 79 ntBASIC-1.96□□□□□ -2.72
SMKR1H3BMG3 MIR548Q-201ENST00000408404 100 ntBASIC-1.97□□□□□ -2.72
SMKR1H3BMG3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 MIR3115-201ENST00000577915 68 ntBASIC-1.98□□□□□ -2.73
SMKR1H3BMG3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 AC090616.4-201ENST00000448026 115 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 MIR6874-201ENST00000635894 71 ntBASIC-1.99□□□□□ -2.73
SMKR1H3BMG3 RNU6-766P-201ENST00000362478 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 RNU6-458P-201ENST00000384179 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 SNORA19-201ENST00000384737 128 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 RNU6-1064P-201ENST00000410626 104 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 AC093729.1-201ENST00000513074 128 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 MIR3675-201ENST00000583661 73 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 U6.58-201ENST00000613107 107 ntBASIC-2□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 HLA-S-202ENST00000425174 53 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 RNU7-174P-201ENST00000516248 59 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR4668-201ENST00000582284 70 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 AC090425.1-201ENST00000610007 140 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR6502-201ENST00000617296 76 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 MIR4320-201ENST00000636981 65 ntBASIC-2.01□□□□□ -2.73
SMKR1H3BMG3 RNU6-704P-201ENST00000364162 103 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR4770-201ENST00000579149 58 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR2052-201ENST00000636055 55 ntBASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.02□□□□□ -2.73
SMKR1H3BMG3 MIR429-201ENST00000362106 83 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNU6-696P-201ENST00000390834 107 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 AC008267.6-201ENST00000441664 139 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNA5SP67-201ENST00000516422 131 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 RNU6-794P-201ENST00000517261 64 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 MIR5591-201ENST00000578248 65 ntBASIC-2.03□□□□□ -2.73
SMKR1H3BMG3 MIR409-201ENST00000362237 79 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-168P-201ENST00000516189 101 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-303P-201ENST00000517091 106 ntBASIC-2.04□□□□□ -2.74
SMKR1H3BMG3 RNU6-959P-201ENST00000384671 107 ntBASIC-2.05□□□□□ -2.74
SMKR1H3BMG3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.05□□□□□ -2.74
SMKR1H3BMG3 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 331.3 ms