Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
CCDC85CA6NKD9 MIR8064-201ENST00000612863 90 ntBASIC0.08□□□□□ -2.4
CCDC85CA6NKD9 Y_RNA.790-201ENST00000614282 102 ntBASIC0.08□□□□□ -2.4
CCDC85CA6NKD9 Y_RNA.782-201ENST00000614695 102 ntBASIC0.08□□□□□ -2.4
CCDC85CA6NKD9 MIR6514-201ENST00000622549 70 ntBASIC0.08□□□□□ -2.4
CCDC85CA6NKD9 SNORA32.1-201ENST00000364514 115 ntBASIC0.07□□□□□ -2.4
CCDC85CA6NKD9 MIR582-201ENST00000365731 98 ntBASIC0.07□□□□□ -2.4
CCDC85CA6NKD9 RNA5SP451-201ENST00000410588 110 ntBASIC0.07□□□□□ -2.4
CCDC85CA6NKD9 RNU6-303P-201ENST00000517091 106 ntBASIC0.07□□□□□ -2.4
CCDC85CA6NKD9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.06□□□□□ -2.4
CCDC85CA6NKD9 RNY4P29-201ENST00000410801 97 ntBASIC0.06□□□□□ -2.4
CCDC85CA6NKD9 MIR6509-201ENST00000614603 85 ntBASIC0.06□□□□□ -2.4
CCDC85CA6NKD9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCDC85CA6NKD9 SNORD114-28-201ENST00000363610 72 ntBASIC0.05□□□□□ -2.4
CCDC85CA6NKD9 SNORA26.2-201ENST00000390922 122 ntBASIC0.05□□□□□ -2.4
CCDC85CA6NKD9 RNU7-159P-201ENST00000459284 62 ntBASIC0.05□□□□□ -2.4
CCDC85CA6NKD9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.05□□□□□ -2.4
CCDC85CA6NKD9 RNU6-990P-201ENST00000364385 104 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 MIR203A-201ENST00000384836 110 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 AC074348.1-201ENST00000426503 132 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 MIR1245B-201ENST00000636115 69 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 MIR4320-201ENST00000636981 65 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 MIR198-201ENST00000637333 62 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 MIR4679-1-201ENST00000637619 75 ntBASIC0.04□□□□□ -2.4
CCDC85CA6NKD9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 RNU6-260P-201ENST00000384092 107 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 RNA5SP461-201ENST00000516451 104 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 SNORA40.17-201ENST00000517256 115 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 MIR1297-201ENST00000637311 77 ntBASIC0.03□□□□□ -2.4
CCDC85CA6NKD9 SNORA63.6-201ENST00000364921 119 ntBASIC0.02□□□□□ -2.41
CCDC85CA6NKD9 RNU6-380P-201ENST00000410207 107 ntBASIC0.02□□□□□ -2.41
CCDC85CA6NKD9 SNORA2.1-201ENST00000363089 137 ntBASIC0.01□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.01□□□□□ -2.41
CCDC85CA6NKD9 SNORA49-201ENST00000386157 136 ntBASIC0.01□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.583-201ENST00000391033 113 ntBASIC0.01□□□□□ -2.41
CCDC85CA6NKD9 SNORD114-3-201ENST00000364969 75 ntBASIC0□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.313-201ENST00000365095 103 ntBASIC0□□□□□ -2.41
CCDC85CA6NKD9 RNU6-787P-201ENST00000384032 107 ntBASIC0□□□□□ -2.41
CCDC85CA6NKD9 MIR4712-201ENST00000583750 82 ntBASIC0□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 RNA5SP147-201ENST00000516493 109 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 MIR3657-201ENST00000584818 117 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
CCDC85CA6NKD9 snoU13.13-201ENST00000458842 104 ntBASIC-0.02□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.02□□□□□ -2.41
CCDC85CA6NKD9 AC021146.9-201ENST00000512503 156 ntBASIC-0.02□□□□□ -2.41
CCDC85CA6NKD9 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.03□□□□□ -2.41
CCDC85CA6NKD9 MIR3202-2-201ENST00000635980 79 ntBASIC-0.03□□□□□ -2.41
CCDC85CA6NKD9 RNA5SP173-201ENST00000364857 136 ntBASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 RNU6-807P-201ENST00000516805 107 ntBASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 AP000676.1-201ENST00000533307 52 ntBASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 MIR4484-201ENST00000582855 83 ntBASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.04□□□□□ -2.42
CCDC85CA6NKD9 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 RNU6-573P-201ENST00000383938 106 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 AC145423.2-201ENST00000610631 239 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 MIR1295B-201ENST00000636144 60 ntBASIC-0.05□□□□□ -2.42
CCDC85CA6NKD9 RNY4P27-201ENST00000363341 96 ntBASIC-0.06□□□□□ -2.42
CCDC85CA6NKD9 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.06□□□□□ -2.42
CCDC85CA6NKD9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CCDC85CA6NKD9 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.07□□□□□ -2.42
CCDC85CA6NKD9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.08□□□□□ -2.42
CCDC85CA6NKD9 RNU6-330P-201ENST00000363015 107 ntBASIC-0.08□□□□□ -2.42
CCDC85CA6NKD9 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.08□□□□□ -2.42
CCDC85CA6NKD9 MIR587-201ENST00000384845 96 ntBASIC-0.08□□□□□ -2.42
CCDC85CA6NKD9 MIR6507-201ENST00000613630 70 ntBASIC-0.08□□□□□ -2.42
CCDC85CA6NKD9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.09□□□□□ -2.42
CCDC85CA6NKD9 MIR3675-201ENST00000583661 73 ntBASIC-0.09□□□□□ -2.42
CCDC85CA6NKD9 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.1□□□□□ -2.43
CCDC85CA6NKD9 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.1□□□□□ -2.43
CCDC85CA6NKD9 SNORA8.1-201ENST00000384250 140 ntBASIC-0.11□□□□□ -2.43
CCDC85CA6NKD9 MIR6739-201ENST00000622461 75 ntBASIC-0.11□□□□□ -2.43
CCDC85CA6NKD9 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
CCDC85CA6NKD9 MIR378F-201ENST00000578143 78 ntBASIC-0.12□□□□□ -2.43
CCDC85CA6NKD9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.13□□□□□ -2.43
CCDC85CA6NKD9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.13□□□□□ -2.43
CCDC85CA6NKD9 MIR365A-201ENST00000362260 87 ntBASIC-0.14□□□□□ -2.43
CCDC85CA6NKD9 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.14□□□□□ -2.43
CCDC85CA6NKD9 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.14□□□□□ -2.43
CCDC85CA6NKD9 MIR4324-201ENST00000584846 72 ntBASIC-0.14□□□□□ -2.43
CCDC85CA6NKD9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.15□□□□□ -2.43
CCDC85CA6NKD9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
CCDC85CA6NKD9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.15□□□□□ -2.43
CCDC85CA6NKD9 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
CCDC85CA6NKD9 MIR655-201ENST00000362159 97 ntBASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 MIR521-2-201ENST00000384818 87 ntBASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 AC096531.1-201ENST00000419107 107 ntBASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 MIR6773-201ENST00000612812 74 ntBASIC-0.16□□□□□ -2.44
CCDC85CA6NKD9 SNORD45.1-201ENST00000363181 77 ntBASIC-0.17□□□□□ -2.44
CCDC85CA6NKD9 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
CCDC85CA6NKD9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.17□□□□□ -2.44
CCDC85CA6NKD9 SNORA33.1-201ENST00000364957 130 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms