Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNU6-340P-201ENST00000364005 107 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 SNORD116-18-201ENST00000383961 92 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 RNU6-630P-201ENST00000391258 106 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 MIR1207-201ENST00000408249 87 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 AL035461.1-201ENST00000421490 332 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 AL450471.1-201ENST00000447509 127 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.61□□□□□ -2.67
RBFOX3A6NFN3 MIR548C-201ENST00000384815 97 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 MIR520D-201ENST00000385002 87 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 RNU6-772P-201ENST00000516042 105 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 MIR548AM-201ENST00000584298 74 ntBASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
RBFOX3A6NFN3 RNU6-682P-201ENST00000363843 106 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 RNU6-887P-201ENST00000410660 100 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 RNU7-153P-201ENST00000516455 62 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 MIR23C-201ENST00000579846 100 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 AC062037.2-201ENST00000610137 73 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.63□□□□□ -2.67
RBFOX3A6NFN3 AL157777.2-201ENST00000258070 137 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 MIR569-201ENST00000385228 96 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 RNU6-972P-201ENST00000391208 107 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 MIR1236-201ENST00000408340 102 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.64□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.65□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.65□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.65□□□□□ -2.67
RBFOX3A6NFN3 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.65□□□□□ -2.67
RBFOX3A6NFN3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.66□□□□□ -2.68
RBFOX3A6NFN3 MIR548A3-201ENST00000385297 97 ntBASIC-1.66□□□□□ -2.68
RBFOX3A6NFN3 RNU6-980P-201ENST00000516925 103 ntBASIC-1.66□□□□□ -2.68
RBFOX3A6NFN3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.66□□□□□ -2.68
RBFOX3A6NFN3 AC008737.2-201ENST00000599446 118 ntBASIC-1.66□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 MIR568-201ENST00000385036 95 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 RNU7-120P-201ENST00000459334 63 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 RNU7-174P-201ENST00000516248 59 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 AC120024.2-201ENST00000576526 175 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 MIR3144-201ENST00000579460 79 ntBASIC-1.67□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 RNY4P27-201ENST00000363341 96 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 SNORD116-10-201ENST00000363791 102 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 RNU6-394P-201ENST00000410735 107 ntBASIC-1.68□□□□□ -2.68
RBFOX3A6NFN3 MIR1302-3-201ENST00000408128 138 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 MTCYBP9-201ENST00000431021 303 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 SCARNA23-201ENST00000516060 130 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 RNU6-537P-201ENST00000517277 103 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.69□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 RNA5SP405-201ENST00000363059 114 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 RNU6-804P-201ENST00000384286 107 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 MIR606-201ENST00000384851 96 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 RNU4-88P-201ENST00000411220 86 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 RNU7-107P-201ENST00000459121 61 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 U2.18-201ENST00000622185 84 ntBASIC-1.7□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.71□□□□□ -2.68
RBFOX3A6NFN3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.71□□□□□ -2.68
RBFOX3A6NFN3 RNU6-587P-201ENST00000391282 106 ntBASIC-1.71□□□□□ -2.68
RBFOX3A6NFN3 MTND4LP9-201ENST00000427694 174 ntBASIC-1.71□□□□□ -2.68
RBFOX3A6NFN3 RNU6-426P-201ENST00000516464 97 ntBASIC-1.71□□□□□ -2.68
RBFOX3A6NFN3 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 RNU6-574P-201ENST00000384265 107 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 RNU6-904P-201ENST00000516206 101 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 SNORD33.1-201ENST00000516213 88 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.72□□□□□ -2.68
RBFOX3A6NFN3 MIR429-201ENST00000362106 83 ntBASIC-1.73□□□□□ -2.69
RBFOX3A6NFN3 RNU6-880P-201ENST00000384526 107 ntBASIC-1.73□□□□□ -2.69
RBFOX3A6NFN3 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.73□□□□□ -2.69
RBFOX3A6NFN3 RNU7-61P-201ENST00000515897 61 ntBASIC-1.73□□□□□ -2.69
RBFOX3A6NFN3 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.74□□□□□ -2.69
RBFOX3A6NFN3 RNU6-867P-201ENST00000364956 107 ntBASIC-1.74□□□□□ -2.69
RBFOX3A6NFN3 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.74□□□□□ -2.69
RBFOX3A6NFN3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.74□□□□□ -2.69
RBFOX3A6NFN3 U4.4-201ENST00000620626 117 ntBASIC-1.74□□□□□ -2.69
RBFOX3A6NFN3 RNU6-797P-201ENST00000363101 109 ntBASIC-1.75□□□□□ -2.69
RBFOX3A6NFN3 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.75□□□□□ -2.69
RBFOX3A6NFN3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.75□□□□□ -2.69
RBFOX3A6NFN3 RNU6-162P-201ENST00000516228 103 ntBASIC-1.75□□□□□ -2.69
RBFOX3A6NFN3 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 296.2 ms