Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNA5SP330-201ENST00000517096 96 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 Y_RNA.236-201ENST00000364427 111 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-302P-201ENST00000365249 107 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 MIR517B-201ENST00000385102 67 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-337P-201ENST00000391243 106 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-848P-201ENST00000515948 107 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-617P-201ENST00000516147 107 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-473P-201ENST00000516164 107 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 RNU6-1049P-201ENST00000516414 107 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 MIR4677-201ENST00000584153 80 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CCDC187A0A096LP49 MIR330-201ENST00000362196 94 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 MIR20A-201ENST00000362279 71 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 Y_RNA.30-201ENST00000362572 97 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 RNU4-37P-201ENST00000410214 84 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 MIR548AD-201ENST00000584780 82 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
CCDC187A0A096LP49 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CCDC187A0A096LP49 SNORA2A-201ENST00000383885 135 ntBASIC0.5□□□□□ -2.33
CCDC187A0A096LP49 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
CCDC187A0A096LP49 RNU6-1246P-201ENST00000391064 107 ntBASIC0.5□□□□□ -2.33
CCDC187A0A096LP49 CYP3A54P-201ENST00000566950 75 ntBASIC0.5□□□□□ -2.33
CCDC187A0A096LP49 SNORD113-4-201ENST00000364802 75 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 SNORD113-2-201ENST00000391082 72 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 RNU7-188P-201ENST00000517063 64 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 MIR3938-201ENST00000582157 103 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
CCDC187A0A096LP49 SNORD114-29-201ENST00000364819 70 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 Y_RNA.325-201ENST00000365171 122 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 Y_RNA.423-201ENST00000384057 113 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 SNORA41B-201ENST00000384785 128 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 MIR876-201ENST00000401147 81 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 MIR3925-201ENST00000584674 77 ntBASIC0.48□□□□□ -2.33
CCDC187A0A096LP49 Y_RNA.246-201ENST00000364495 108 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 MIR548C-201ENST00000384815 97 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 MIR548AG1-201ENST00000579932 66 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 U7.6-201ENST00000610841 64 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 MIR6773-201ENST00000612812 74 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 RN7SL660P-201ENST00000614852 299 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 U6.96-201ENST00000636425 70 ntBASIC0.47□□□□□ -2.33
CCDC187A0A096LP49 SNORD44.1-201ENST00000363202 61 ntBASIC0.46□□□□□ -2.34
CCDC187A0A096LP49 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
CCDC187A0A096LP49 RNU6-502P-201ENST00000362419 108 ntBASIC0.45□□□□□ -2.34
CCDC187A0A096LP49 RNA5SP128-201ENST00000365305 116 ntBASIC0.45□□□□□ -2.34
CCDC187A0A096LP49 MIR519A2-201ENST00000384990 87 ntBASIC0.45□□□□□ -2.34
CCDC187A0A096LP49 MIRLET7B-201ENST00000385140 83 ntBASIC0.45□□□□□ -2.34
CCDC187A0A096LP49 AL021921.1-201ENST00000442774 93 ntBASIC0.45□□□□□ -2.34
CCDC187A0A096LP49 MIRLET7D-201ENST00000362263 87 ntBASIC0.44□□□□□ -2.34
CCDC187A0A096LP49 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
CCDC187A0A096LP49 MIR760-201ENST00000390220 80 ntBASIC0.44□□□□□ -2.34
CCDC187A0A096LP49 MIR1255B2-201ENST00000408618 67 ntBASIC0.44□□□□□ -2.34
CCDC187A0A096LP49 SNORD2-201ENST00000459163 69 ntBASIC0.44□□□□□ -2.34
CCDC187A0A096LP49 Y_RNA.74-201ENST00000362911 99 ntBASIC0.43□□□□□ -2.34
CCDC187A0A096LP49 Y_RNA.282-201ENST00000364793 102 ntBASIC0.43□□□□□ -2.34
CCDC187A0A096LP49 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
CCDC187A0A096LP49 MIR106A-201ENST00000384870 81 ntBASIC0.43□□□□□ -2.34
CCDC187A0A096LP49 RNU6-518P-201ENST00000516056 96 ntBASIC0.43□□□□□ -2.34
CCDC187A0A096LP49 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 RNU6-614P-201ENST00000384369 107 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 SNORD116-16-201ENST00000384533 92 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 MIR1197-201ENST00000408818 88 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 RNU6-141P-201ENST00000410499 105 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 U6.59-201ENST00000615686 107 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 MIR499B-201ENST00000636498 73 ntBASIC0.42□□□□□ -2.34
CCDC187A0A096LP49 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 SNORD115-25-201ENST00000362619 82 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 SNORD115-23-201ENST00000364461 82 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 RNU6-1036P-201ENST00000383959 104 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 RNU7-154P-201ENST00000516194 62 ntBASIC0.41□□□□□ -2.34
CCDC187A0A096LP49 RNA5SP257-201ENST00000363023 116 ntBASIC0.4□□□□□ -2.35
CCDC187A0A096LP49 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.4□□□□□ -2.35
CCDC187A0A096LP49 AC084368.1-201ENST00000620935 65 ntBASIC0.4□□□□□ -2.35
CCDC187A0A096LP49 MIR7978-201ENST00000636158 59 ntBASIC0.4□□□□□ -2.35
CCDC187A0A096LP49 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CCDC187A0A096LP49 MIR548H2-201ENST00000408874 88 ntBASIC0.39□□□□□ -2.35
CCDC187A0A096LP49 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
CCDC187A0A096LP49 RNU6-782P-201ENST00000516852 104 ntBASIC0.39□□□□□ -2.35
CCDC187A0A096LP49 RNU6-520P-201ENST00000384717 104 ntBASIC0.37□□□□□ -2.35
CCDC187A0A096LP49 RNU6-127P-201ENST00000390897 107 ntBASIC0.37□□□□□ -2.35
CCDC187A0A096LP49 RNA5SP470-201ENST00000516463 106 ntBASIC0.37□□□□□ -2.35
CCDC187A0A096LP49 RNU6-231P-201ENST00000517122 103 ntBASIC0.37□□□□□ -2.35
CCDC187A0A096LP49 SCARNA11.2-201ENST00000517183 154 ntBASIC0.37□□□□□ -2.35
CCDC187A0A096LP49 RNU6-1327P-201ENST00000365302 105 ntBASIC0.36□□□□□ -2.35
CCDC187A0A096LP49 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
CCDC187A0A096LP49 MIR4514-201ENST00000581410 57 ntBASIC0.35□□□□□ -2.35
CCDC187A0A096LP49 SNORD1B-201ENST00000363091 84 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 Y_RNA.109-201ENST00000363215 102 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 RNU6-246P-201ENST00000384702 107 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 Y_RNA.698-201ENST00000516798 118 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 SNORA40.16-201ENST00000517238 121 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 AL353803.5-201ENST00000599815 141 ntBASIC0.34□□□□□ -2.36
CCDC187A0A096LP49 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 229.5 ms