Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf1aP25118 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf1aP25118 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Dancr-204ENSMUST00000132389 2347 ntBASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf1aP25118 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tnfrsf1aP25118 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms